Variation_Name | GeneID | GeneSymbol | ClinicalSignificance | dbSNP | RCVaccession | TestedInGTR | PhenotypeIDs | Chromosome | Start | Stop | HGVS_c | HGVS_p | HGVS_g | OtherIDs | Disease_ClinVar | Disease_hgmd | NM_000218.2(KCNQ1):c.1892_1911del20 (p.Pro631Hisfs) | -1 | - | Pathogenic | 397508103 | RCV000003285; RCV000182287; RCV000046038; | N | MedGen:CN029864,OMIM:115000; MedGen:CN034131,OMIM:220400; MedGen:CN177655 | 11 | 2869094 | 2869113 | NM_000218.2:c.1892_1911del20 | NP_000209.2:p.Pro631Hisfs | NC_000011.9:g.2869094_2869113del20 | OMIM Allelic Variant:607542.0026 | CN029864 115000 Cardiac arrhythmia; CN034131 220400 Jervell and Lange-Nielsen syndrome 1; CN177655 Long QT syndrome, LQT1 subtype | | |
NM_000219.5(KCNE1):c.226G>A (p.Asp76Asn) | 3753 | KCNE1 | Likely pathogenic;Pathogenic | 74315445 | RCV000148512; RCV000014419; RCV000014420; RCV000222568; RCV000119080; | N | MedGen:C1141890, Orphanet:ORPHA768,SNOMED CT:442917000; MedGen:C1867904,OMIM:613695; MedGen:C2676723,OMIM:612347; MedGen:CN034131,OMIM:220400; MedGen:CN221809 | 21 | 35821707 | 35821707 | NM_000219.5:c.226G>A | NP_000210.2:p.Asp76Asn | NC_000021.8:g.35821707C>T | OMIM Allelic Variant:176261.0003 | C1141890 Congenital long QT syndrome; CN034131 220400 Jervell and Lange-Nielsen syndrome 1; C2676723 612347 Jervell and Lange-Nielsen syndrome 2; C1867904 613695 Long QT syndrome 5; CN221809 not provided | | |
NM_000218.2(KCNQ1):c.2T>C (p.Met1Thr) | 3784 | KCNQ1 | Pathogenic | 199473485 | RCV000046046; RCV000057656; | N | MedGen:C1141890, Orphanet:ORPHA768,SNOMED CT:442917000; MedGen:CN034131,OMIM:220400 | 11 | 2466330 | 2466330 | NM_000218.2:c.2T>C | NP_000209.2:p.Met1Thr | NC_000011.9:g.2466330T>C | - | C1141890 Congenital long QT syndrome; CN034131 220400 Jervell and Lange-Nielsen syndrome 1 | | |
NM_000218.2(KCNQ1):c.451_452delCT (p.Leu151Glyfs) | 3784 | KCNQ1 | Pathogenic | 397508110 | RCV000003281; RCV000182294; | N | MedGen:CN034131,OMIM:220400; MedGen:CN221809 | 11 | 2549222 | 2549223 | NM_000218.2:c.451_452delCT | NP_000209.2:p.Leu151Glyfs | NC_000011.9:g.2549222_2549223delCT | OMIM Allelic Variant:607542.0022 | CN034131 220400 Jervell and Lange-Nielsen syndrome 1; CN221809 not provided | | |
NM_000218.2(KCNQ1):c.513C>G (p.Tyr171Ter) | 3784 | KCNQ1 | not provided | 139042529 | RCV000046070; | N | MedGen:CN034131,OMIM:220400 | 11 | 2591893 | 2591893 | NM_000218.2:c.513C>G | NP_000209.2:p.Tyr171Ter | NC_000011.9:g.2591893C>G,NC_000011.9:g.2591893C>T | - | CN034131 220400 Jervell and Lange-Nielsen syndrome 1 | | |
NM_000218.2(KCNQ1):c.567dupG (p.Arg190Alafs) | 3784 | KCNQ1 | Pathogenic | 397508117 | RCV000003273; RCV000182266; RCV000046086; | N | MedGen:CN029864,OMIM:115000; MedGen:CN034131,OMIM:220400; MedGen:CN177655 | 11 | 2591947 | 2591947 | NM_000218.2:c.567dupG | NP_000209.2:p.Arg190Alafs | NC_000011.9:g.2591947dupG | OMIM Allelic Variant:607542.0014 | CN029864 115000 Cardiac arrhythmia; CN034131 220400 Jervell and Lange-Nielsen syndrome 1; CN177655 Long QT syndrome, LQT1 subtype | | |
NM_181798.1(KCNQ1):c.192_196delGCGCT (p.Arg65Cysfs) | 3784 | KCNQ1 | Pathogenic | 397508118 | RCV000144973; RCV000182268; RCV000046091; | N | MedGen:CN034131,OMIM:220400; MedGen:CN177655; MedGen:CN221809 | 11 | 2591953 | 2591957 | NM_181798.1:c.192_196delGCGCT | NP_861463.1:p.Arg65Cysfs | | - | CN034131 220400 Jervell and Lange-Nielsen syndrome 1; CN177655 Long QT syndrome, LQT1 subtype; CN221809 not provided | | |
NM_000218.2(KCNQ1):c.585delG (p.Lys196Serfs) | 3784 | KCNQ1 | Likely pathogenic;Pathogenic | 397508120 | RCV000046095; RCV000196205; RCV000182269; RCV000221253; | N | MedGen:C0022387, Orphanet:ORPHA90647,SNOMED CT:373905003; MedGen:C0023976,SNOMED CT:9651007; MedGen:CN034131,OMIM:220400; MedGen:CN221809 | 11 | 2591965 | 2591965 | NM_000218.2:c.585delG | NP_000209.2:p.Lys196Serfs | NC_000011.9:g.2591965delG | - | C0022387 Jervell and Lange-Nielsen syndrome; CN034131 220400 Jervell and Lange-Nielsen syndrome 1; C0023976 Long QT syndrome; CN221809 not provided | | |
NM_000218.2(KCNQ1):c.604G>A (p.Asp202Asn) | 3784 | KCNQ1 | Pathogenic | 199472702 | RCV000046096; RCV000182091; RCV000057718; | N | MedGen:C1141890, Orphanet:ORPHA768,SNOMED CT:442917000; MedGen:CN034131,OMIM:220400; MedGen:CN221809 | 11 | 2591984 | 2591984 | NM_000218.2:c.604G>A | NP_000209.2:p.Asp202Asn | NC_000011.9:g.2591984G>A,NC_000011.9:g.2591984G>C | - | C1141890 Congenital long QT syndrome; CN034131 220400 Jervell and Lange-Nielsen syndrome 1; CN221809 not provided | | |
NM_000218.2(KCNQ1):c.728G>A (p.Arg243His) | 3784 | KCNQ1 | Pathogenic | 120074196 | RCV000046112; RCV000182305; RCV000057742; | N | MedGen:C1141890, Orphanet:ORPHA768,SNOMED CT:442917000; MedGen:CN029864,OMIM:115000; MedGen:CN034131,OMIM:220400 | 11 | 2593287 | 2593287 | NM_000218.2:c.728G>A | NP_000209.2:p.Arg243His | NC_000011.9:g.2593287G>A,NC_000011.9:g.2593287G>C | - | CN029864 115000 Cardiac arrhythmia; C1141890 Congenital long QT syndrome; CN034131 220400 Jervell and Lange-Nielsen syndrome 1 | | |
NM_000218.2(KCNQ1):c.743_744delGGinsTC (p.Trp248Phe) | 3784 | KCNQ1 | not provided | 397508123 | RCV000046115; | N | MedGen:CN034131,OMIM:220400 | 11 | 2593302 | 2593303 | NM_000218.2:c.743_744delGGinsTC | NP_000209.2:p.Trp248Phe | NC_000011.9:g.2593302_2593303delGGinsTC | - | CN034131 220400 Jervell and Lange-Nielsen syndrome 1 | | |
NM_000218.2(KCNQ1):c.783G>C (p.Glu261Asp) | 3784 | KCNQ1 | Pathogenic | 199472721 | RCV000046127; RCV000057760; | N | MedGen:C1141890, Orphanet:ORPHA768,SNOMED CT:442917000; MedGen:CN034131,OMIM:220400 | 11 | 2594078 | 2594078 | NM_000218.2:c.783G>C | NP_000209.2:p.Glu261Asp | NC_000011.9:g.2594078G>C | - | C1141890 Congenital long QT syndrome; CN034131 220400 Jervell and Lange-Nielsen syndrome 1 | | |
NM_181798.1(KCNQ1):c.447_449delCTC (p.Ser150del) | 3784 | KCNQ1 | Pathogenic | 397508127 | RCV000046140; RCV000182333; RCV000046139; | N | MedGen:CN034131,OMIM:220400; MedGen:CN177655; MedGen:CN221809 | 11 | 2594123 | 2594125 | NM_181798.1:c.447_449delCTC | NP_861463.1:p.Ser150del | | - | CN034131 220400 Jervell and Lange-Nielsen syndrome 1; CN177655 Long QT syndrome, LQT1 subtype; CN221809 not provided | | |
NM_000218.2(KCNQ1):c.914G>C (p.Trp305Ser) | 3784 | KCNQ1 | Pathogenic | 120074186 | RCV000003275; RCV000182130; RCV000057796; | N | MedGen:C1141890, Orphanet:ORPHA768,SNOMED CT:442917000; MedGen:CN034131,OMIM:220400; MedGen:CN221809 | 11 | 2594209 | 2594209 | NM_000218.2:c.914G>C | NP_000209.2:p.Trp305Ser | NC_000011.9:g.2594209G>A,NC_000011.9:g.2594209G>C,NC_000011.9:g.2594209G>T | OMIM Allelic Variant:607542.0016 | C1141890 Congenital long QT syndrome; CN034131 220400 Jervell and Lange-Nielsen syndrome 1; CN221809 not provided | | |
NM_000218.2(KCNQ1):c.921G>A (p.Val307=) | 3784 | KCNQ1 | Pathogenic | 397508131 | RCV000046156; RCV000182133; | N | MedGen:CN034131,OMIM:220400; MedGen:CN221809 | 11 | 2594216 | 2594216 | NM_000218.2:c.921G>A | NP_000209.2:p.Val307= | NC_000011.9:g.2594216G>A | - | CN034131 220400 Jervell and Lange-Nielsen syndrome 1; CN221809 not provided | | |
NM_000218.2(KCNQ1):c.998_999delCT (p.Ser333Cysfs) | 3784 | KCNQ1 | Pathogenic | 397508134 | RCV000046185; RCV000182273; | N | MedGen:CN034131,OMIM:220400; MedGen:CN221809 | 11 | 2604741 | 2604742 | NM_000218.2:c.998_999delCT | NP_000209.2:p.Ser333Cysfs | NC_000011.9:g.2604741_2604742delCT | - | CN034131 220400 Jervell and Lange-Nielsen syndrome 1; CN221809 not provided | | |
NM_000218.2(KCNQ1):c.1008delC (p.Ile337Serfs) | 3784 | KCNQ1 | not provided | 397508067 | RCV000045927; | N | MedGen:CN034131,OMIM:220400 | 11 | 2604751 | 2604751 | NM_000218.2:c.1008delC | NP_000209.2:p.Ile337Serfs | NC_000011.9:g.2604751delC | - | CN034131 220400 Jervell and Lange-Nielsen syndrome 1 | | |
NM_000218.2(KCNQ1):c.1149dupT (p.Ala384Cysfs) | 3784 | KCNQ1 | not provided | 397508079 | RCV000045969; | N | MedGen:CN034131,OMIM:220400 | 11 | 2608820 | 2608820 | NM_000218.2:c.1149dupT | NP_000209.2:p.Ala384Cysfs | NC_000011.9:g.2608820dupT | - | CN034131 220400 Jervell and Lange-Nielsen syndrome 1 | | |
NM_000218.2(KCNQ1):c.1189delC (p.Arg397Glyfs) | 3784 | KCNQ1 | not provided | 397508081 | RCV000045975; | N | MedGen:CN034131,OMIM:220400 | 11 | 2608860 | 2608860 | NM_000218.2:c.1189delC | NP_000209.2:p.Arg397Glyfs | NC_000011.9:g.2608860delC | - | CN034131 220400 Jervell and Lange-Nielsen syndrome 1 | | |
NM_000218.2(KCNQ1):c.1630_1635delCAGTACinsGTTGAGA (p.Gln544Valfs) | 3784 | KCNQ1 | Pathogenic | 397515637 | RCV000003272; | N | MedGen:CN034131,OMIM:220400 | 11 | 2797229 | 2797234 | NM_000218.2:c.1630_1635delCAGTACinsGTTGAGA | NP_000209.2:p.Gln544Valfs | NC_000011.9:g.2797229_2797234delCAGTACinsGTTGAGA | OMIM Allelic Variant:607542.0013 | CN034131 220400 Jervell and Lange-Nielsen syndrome 1 | | |
NM_000218.2(KCNQ1):c.1686-1G>A | 3784 | KCNQ1 | not provided | 397508098 | RCV000046013; | N | MedGen:CN034131,OMIM:220400 | 11 | 2798215 | 2798215 | NM_000218.2:c.1686-1G>A | | NC_000011.9:g.2798215G>A | - | CN034131 220400 Jervell and Lange-Nielsen syndrome 1 | | |
NM_000218.2(KCNQ1):c.1760C>T (p.Thr587Met) | 3784 | KCNQ1 | Pathogenic | 120074189 | RCV000003286; RCV000182221; RCV000046026; RCV000057632; | N | MedGen:C1141890, Orphanet:ORPHA768,SNOMED CT:442917000; MedGen:CN034131,OMIM:220400; MedGen:CN177655; MedGen:CN221809 | 11 | 2799233 | 2799233 | NM_000218.2:c.1760C>T | NP_000209.2:p.Thr587Met | NC_000011.9:g.2799233C>T | OMIM Allelic Variant:607542.0027 | C1141890 Congenital long QT syndrome; CN034131 220400 Jervell and Lange-Nielsen syndrome 1; CN177655 Long QT syndrome, LQT1 subtype; CN221809 not provided | | |
NM_000218.2(KCNQ1):c.1766G>A (p.Gly589Asp) | 3784 | KCNQ1 | Pathogenic | 120074190 | RCV000003288; RCV000003289; RCV000182223; RCV000057633; | N | MedGen:C0035828,OMIM:192500,ORPHA:101016,SNOMED CT:20852007; MedGen:C1141890, Orphanet:ORPHA768,SNOMED CT:442917000; MedGen:CN034131,OMIM:220400; MedGen:CN221809 | 11 | 2799239 | 2799239 | NM_000218.2:c.1766G>A | NP_000209.2:p.Gly589Asp | NC_000011.9:g.2799239G>A | OMIM Allelic Variant:607542.0029 | C1141890 Congenital long QT syndrome; CN034131 220400 Jervell and Lange-Nielsen syndrome 1; C0035828 192500 Long QT syndrome 1; CN221809 not provided | | |