Variation_Name | GeneID | GeneSymbol | ClinicalSignificance | dbSNP | RCVaccession | TestedInGTR | PhenotypeIDs | Chromosome | Start | Stop | HGVS_c | HGVS_p | HGVS_g | OtherIDs | Disease_ClinVar | Disease_hgmd | NM_004333.4(BRAF):c.1789C>G (p.Leu597Val) | 673 | BRAF | Pathogenic | 121913369 | RCV000208539; RCV000015003; RCV000030948; RCV000033333; | N | MedGen:C0007131,SNOMED CT:254637007; MedGen:C0041409,OMIM:163950; MedGen:C3150970,OMIM:613706; MedGen:CN166718 | 7 | 140453146 | 140453146 | NM_004333.4:c.1789C>G | NP_004324.2:p.Leu597Val | NC_000007.13:g.140453146G>C | OMIM Allelic Variant:164757.0008,OMIM Allelic Variant:164757.0026 | C0007131 Non-small cell lung cancer; C0041409 163950 Noonan syndrome 1; C3150970 613706 Noonan syndrome 7; CN166718 Rasopathy | | |
NM_004333.4(BRAF):c.1593G>C (p.Trp531Cys) | 673 | BRAF | Pathogenic | 606231228 | RCV000208560; RCV000022682; RCV000191066; | N | MedGen:C0041409,OMIM:163950; MedGen:C3150970,OMIM:613706; MedGen:CN166718 | 7 | 140476813 | 140476813 | NM_004333.4:c.1593G>C | NP_004324.2:p.Trp531Cys | NC_000007.13:g.140476813C>G | OMIM Allelic Variant:164757.0025 | C0041409 163950 Noonan syndrome 1; C3150970 613706 Noonan syndrome 7; CN166718 Rasopathy | | |
NM_004333.4(BRAF):c.722C>T (p.Thr241Met) | 673 | BRAF | Pathogenic | 387906660 | RCV000208540; RCV000022678; RCV000211753; RCV000033281; | N | MedGen:C0028326, Orphanet:ORPHA648,SNOMED CT:205824006; MedGen:C0041409,OMIM:163950; MedGen:C3150970,OMIM:613706; MedGen:CN221809 | 7 | 140501350 | 140501350 | NM_004333.4:c.722C>T | NP_004324.2:p.Thr241Met | NC_000007.13:g.140501350G>A,NC_000007.13:g.140501350G>C,NC_000007.13:g.140501350 | OMIM Allelic Variant:164757.0022 | C0028326 Noonan syndrome; C0041409 163950 Noonan syndrome 1; C3150970 613706 Noonan syndrome 7; CN221809 not provided | | |
NM_004333.4(BRAF):c.722C>G (p.Thr241Arg) | 673 | BRAF | Pathogenic | 387906660 | RCV000208548; RCV000022679; RCV000033280; | N | MedGen:C0041409,OMIM:163950; MedGen:C3150970,OMIM:613706; MedGen:CN166718 | 7 | 140501350 | 140501350 | NM_004333.4:c.722C>G | NP_004324.2:p.Thr241Arg | NC_000007.13:g.140501350G>A,NC_000007.13:g.140501350G>C,NC_000007.13:g.140501350 | OMIM Allelic Variant:164757.0023 | C0041409 163950 Noonan syndrome 1; C3150970 613706 Noonan syndrome 7; CN166718 Rasopathy | | |
NM_004985.4(KRAS):c.347A>G (p.Asn116Ser) | 3845 | KRAS | not provided | 202247812 | RCV000144422; | N | MedGen:C0041409,OMIM:163950 | 12 | 25378651 | 25378651 | NM_004985.4:c.347A>G | NP_004976.2:p.Asn116Ser | NC_000012.11:g.25378651T>C | - | C0041409 163950 Noonan syndrome 1 | | |
NM_002524.4(NRAS):c.179G>A (p.Gly60Glu) | 4893 | NRAS | Pathogenic | 267606920 | RCV000208552; RCV000014917; RCV000158982; | N | MedGen:C0041409,OMIM:163950; MedGen:C2750732,OMIM:613224; MedGen:CN221809 | 1 | 115256532 | 115256532 | NM_002524.4:c.179G>A | NP_002515.1:p.Gly60Glu | NC_000001.10:g.115256532C>T | OMIM Allelic Variant:164790.0005 | C0041409 163950 Noonan syndrome 1; C2750732 613224 Noonan syndrome 6; CN221809 not provided | | |
NM_002524.4(NRAS):c.149C>T (p.Thr50Ile) | 4893 | NRAS | Pathogenic | 267606921 | RCV000208537; RCV000014916; RCV000211835; | N | MedGen:C0028326, Orphanet:ORPHA648,SNOMED CT:205824006; MedGen:C0041409,OMIM:163950; MedGen:C2750732,OMIM:613224 | 1 | 115256562 | 115256562 | NM_002524.4:c.149C>T | NP_002515.1:p.Thr50Ile | NC_000001.10:g.115256562G>A | OMIM Allelic Variant:164790.0004 | C0028326 Noonan syndrome; C0041409 163950 Noonan syndrome 1; C2750732 613224 Noonan syndrome 6 | | |
NM_002524.4(NRAS):c.101C>T (p.Pro34Leu) | 4893 | NRAS | Pathogenic | 397514553 | RCV000208568; RCV000032848; | N | MedGen:C0041409,OMIM:163950; MedGen:C0334082,OMIM:162900,ORPHA:35125,SNOMED CT:25201003 | 1 | 115258681 | 115258681 | NM_002524.4:c.101C>T | NP_002515.1:p.Pro34Leu | NC_000001.10:g.115258681G>A | OMIM Allelic Variant:164790.0006 | C0334082 162900 Epidermal nevus; C1838979 252010 Mitochondrial complex I deficiency; C0041409 163950 Noonan syndrome 1 | | |
NM_002524.4(NRAS):c.71T>A (p.Ile24Asn) | 4893 | NRAS | Pathogenic | 869025573 | RCV000208553; | N | MedGen:C0041409,OMIM:163950 | 1 | 115258711 | 115258711 | NM_002524.4:c.71T>A | NP_002515.1:p.Ile24Asn | NC_000001.10:g.115258711A>T | - | C0041409 163950 Noonan syndrome 1 | | |
NM_002834.3(PTPN11):c.5C>T (p.Thr2Ile) | 5781 | PTPN11 | Pathogenic | 267606990 | RCV000014277; RCV000211847; RCV000033445; | N | MedGen:C0028326, Orphanet:ORPHA648,SNOMED CT:205824006; MedGen:C0041409,OMIM:163950; MedGen:CN221809 | 12 | 112856920 | 112856920 | NM_002834.3:c.5C>T | NP_002825.3:p.Thr2Ile | NC_000012.11:g.112856920C>T | OMIM Allelic Variant:176876.0027 | C0028326 Noonan syndrome; C0041409 163950 Noonan syndrome 1; CN221809 not provided | | |
NM_002834.3(PTPN11):c.174C>G (p.Asn58Lys) | 5781 | PTPN11 | Likely pathogenic;Pathogenic | 397507506 | RCV000037630; RCV000211846; RCV000033457; | N | MedGen:C0028326, Orphanet:ORPHA648,SNOMED CT:205824006; MedGen:C0041409,OMIM:163950; MedGen:CN166718 | 12 | 112888158 | 112888158 | NM_002834.3:c.174C>G | NP_002825.3:p.Asn58Lys | NC_000012.11:g.112888158C>A,NC_000012.11:g.112888158C>G | - | C0028326 Noonan syndrome; C0041409 163950 Noonan syndrome 1; CN166718 Rasopathy | | |
NM_002834.3(PTPN11):c.179_181delGTG (p.Gly60del) | 5781 | PTPN11 | Pathogenic | 80338836 | RCV000014274; | N | MedGen:C0041409,OMIM:163950 | 12 | 112888163 | 112888165 | NM_002834.3:c.179_181delGTG | NP_002825.3:p.Gly60del | NC_000012.11:g.112888163_112888165delGTG | OMIM Allelic Variant:176876.0024 | C0041409 163950 Noonan syndrome 1 | | |
NM_002834.3(PTPN11):c.181_183delGAT (p.Asp61del) | 5781 | PTPN11 | Pathogenic | 869025574 | RCV000208567; | N | MedGen:C0041409,OMIM:163950 | 12 | 112888165 | 112888167 | NM_002834.3:c.181_183delGAT | NP_002825.3:p.Asp61del | NC_000012.11:g.112888165_112888167delGAT | - | C0041409 163950 Noonan syndrome 1 | | |
NM_002834.3(PTPN11):c.182A>G (p.Asp61Gly) | 5781 | PTPN11 | Pathogenic | 121918461 | RCV000014258; RCV000156984; RCV000033464; RCV000077856; | N | MedGen:C0028326, Orphanet:ORPHA648,SNOMED CT:205824006; MedGen:C0041409,OMIM:163950; MedGen:CN166718; MedGen:CN221809 | 12 | 112888166 | 112888166 | NM_002834.3:c.182A>G | NP_002825.3:p.Asp61Gly | NC_000012.11:g.112888166A>C,NC_000012.11:g.112888166A>G,NC_000012.11:g.112888166 | HGMD:CM013415,OMIM Allelic Variant:176876.0010 | C0028326 Noonan syndrome; C0041409 163950 Noonan syndrome 1; CN221809 not provided; CN166718 Rasopathy | | |
NM_002834.3(PTPN11):c.184T>G (p.Tyr62Asp) | 5781 | PTPN11 | Pathogenic | 121918460 | RCV000014257; RCV000156993; RCV000033466; RCV000153794; | N | MedGen:C0028326, Orphanet:ORPHA648,SNOMED CT:205824006; MedGen:C0041409,OMIM:163950; MedGen:CN166718; MedGen:CN221809 | 12 | 112888168 | 112888168 | NM_002834.3:c.184T>G | NP_002825.3:p.Tyr62Asp | NC_000012.11:g.112888168T>A,NC_000012.11:g.112888168T>G | HGMD:CM021128,OMIM Allelic Variant:176876.0009 | C0028326 Noonan syndrome; C0041409 163950 Noonan syndrome 1; CN221809 not provided; CN166718 Rasopathy | | |
NM_002834.3(PTPN11):c.188A>G (p.Tyr63Cys) | 5781 | PTPN11 | Pathogenic | 121918459 | RCV000014261; RCV000157000; RCV000033468; RCV000077857; | N | MedGen:C0028326, Orphanet:ORPHA648,SNOMED CT:205824006; MedGen:C0041409,OMIM:163950; MedGen:CN166718; MedGen:CN221809 | 12 | 112888172 | 112888172 | NM_002834.3:c.188A>G | NP_002825.3:p.Tyr63Cys | NC_000012.11:g.112888172A>G | HGMD:CM013416,OMIM Allelic Variant:176876.0008 | C0028326 Noonan syndrome; C0041409 163950 Noonan syndrome 1; CN221809 not provided; CN166718 Rasopathy | | |
NM_002834.3(PTPN11):c.214G>T (p.Ala72Ser) | 5781 | PTPN11 | Pathogenic | 121918453 | RCV000014252; RCV000157001; RCV000033471; RCV000212890; | N | MedGen:C0028326, Orphanet:ORPHA648,SNOMED CT:205824006; MedGen:C0041409,OMIM:163950; MedGen:CN166718; MedGen:CN221809 | 12 | 112888198 | 112888198 | NM_002834.3:c.214G>T | NP_002825.3:p.Ala72Ser | NC_000012.11:g.112888198G>A,NC_000012.11:g.112888198G>C,NC_000012.11:g.112888198 | OMIM Allelic Variant:176876.0001 | C0028326 Noonan syndrome; C0041409 163950 Noonan syndrome 1; CN221809 not provided; CN166718 Rasopathy | | |
NM_002834.3(PTPN11):c.215C>G (p.Ala72Gly) | 5781 | PTPN11 | Pathogenic | 121918454 | RCV000014253; RCV000157006; RCV000157679; | N | MedGen:C0028326, Orphanet:ORPHA648,SNOMED CT:205824006; MedGen:C0041409,OMIM:163950; MedGen:CN221809 | 12 | 112888199 | 112888199 | NM_002834.3:c.215C>G | NP_002825.3:p.Ala72Gly | NC_000012.11:g.112888199C>G,NC_000012.11:g.112888199C>T | OMIM Allelic Variant:176876.0002 | C0028326 Noonan syndrome; C0041409 163950 Noonan syndrome 1; CN221809 not provided | | |
NM_002834.3(PTPN11):c.218C>T (p.Thr73Ile) | 5781 | PTPN11 | Pathogenic | 121918462 | RCV000014262; RCV000156985; RCV000033475; RCV000212891; | N | MedGen:C0028326, Orphanet:ORPHA648,SNOMED CT:205824006; MedGen:C0041409,OMIM:163950; MedGen:CN166718; MedGen:CN221809 | 12 | 112888202 | 112888202 | NM_002834.3:c.218C>T | NP_002825.3:p.Thr73Ile | NC_000012.11:g.112888202C>T | OMIM Allelic Variant:176876.0011,OMIM Allelic Variant:176876.0013 | C0028326 Noonan syndrome; C0041409 163950 Noonan syndrome 1; CN221809 not provided; CN166718 Rasopathy | | |
NM_002834.3(PTPN11):c.236A>G (p.Gln79Arg) | 5781 | PTPN11 | Pathogenic | 121918466 | RCV000014268; RCV000037641; RCV000033480; RCV000157680; | N | MedGen:C0028326, Orphanet:ORPHA648,SNOMED CT:205824006; MedGen:C0041409,OMIM:163950; MedGen:CN166718; MedGen:CN221809 | 12 | 112888220 | 112888220 | NM_002834.3:c.236A>G | NP_002825.3:p.Gln79Arg | NC_000012.11:g.112888220A>G | OMIM Allelic Variant:176876.0018 | C0028326 Noonan syndrome; C0041409 163950 Noonan syndrome 1; CN221809 not provided; CN166718 Rasopathy | | |
NM_002834.3(PTPN11):c.785T>G (p.Leu262Arg) | 5781 | PTPN11 | Pathogenic | 397507526 | RCV000106324; RCV000033500; | N | MedGen:C0041409,OMIM:163950; MedGen:CN166718 | 12 | 112910776 | 112910776 | NM_002834.3:c.785T>G | NP_002825.3:p.Leu262Arg | NC_000012.11:g.112910776T>G | - | C0041409 163950 Noonan syndrome 1; CN166718 Rasopathy | | |
NM_002834.3(PTPN11):c.844A>G (p.Ile282Val) | 5781 | PTPN11 | Pathogenic | 397507529 | RCV000154403; RCV000033505; RCV000077860; | N | MedGen:C0041409,OMIM:163950; MedGen:CN166718; MedGen:CN221809 | 12 | 112910835 | 112910835 | NM_002834.3:c.844A>G | NP_002825.3:p.Ile282Val | NC_000012.11:g.112910835A>G | HGMD:CM013421 | C0041409 163950 Noonan syndrome 1; CN221809 not provided; CN166718 Rasopathy | | |
NM_002834.3(PTPN11):c.854T>C (p.Phe285Ser) | 5781 | PTPN11 | Pathogenic | 121918463 | RCV000014263; RCV000037663; RCV000077862; RCV000190417; | N | MedGen:C0028326, Orphanet:ORPHA648,SNOMED CT:205824006; MedGen:C0041409,OMIM:163950; MedGen:CN221809; MedGen:CN232350 | 12 | 112915455 | 112915455 | NM_002834.3:c.854T>C | NP_002825.3:p.Phe285Ser | NC_000012.11:g.112915455T>A,NC_000012.11:g.112915455T>C,NC_000012.11:g.112915455 | HGMD:CM021134,OMIM Allelic Variant:176876.0012 | CN232350 Early T cell progenitor acute lymphoblastic leukemia; C0028326 Noonan syndrome; C0041409 163950 Noonan syndrome 1; CN221809 not provided | | |
NM_002834.3(PTPN11):c.922A>G (p.Asn308Asp) | 5781 | PTPN11 | Pathogenic | 28933386 | RCV000014254; RCV000156977; RCV000033516; RCV000077863; | N | MedGen:C0028326, Orphanet:ORPHA648,SNOMED CT:205824006; MedGen:C0041409,OMIM:163950; MedGen:CN166718; MedGen:CN221809 | 12 | 112915523 | 112915523 | NM_002834.3:c.922A>G | NP_002825.3:p.Asn308Asp | NC_000012.11:g.112915523A>G | HGMD:CM013422,OMIM Allelic Variant:176876.0003 | C0028326 Noonan syndrome; C0041409 163950 Noonan syndrome 1; CN221809 not provided; CN166718 Rasopathy | | |
NM_002834.3(PTPN11):c.923A>G (p.Asn308Ser) | 5781 | PTPN11 | Pathogenic | 121918455 | RCV000014255; RCV000037669; RCV000033518; RCV000157682; | N | MedGen:C0028326, Orphanet:ORPHA648,SNOMED CT:205824006; MedGen:C0041409,OMIM:163950; MedGen:CN166718; MedGen:CN221809 | 12 | 112915524 | 112915524 | NM_002834.3:c.923A>G | NP_002825.3:p.Asn308Ser | NC_000012.11:g.112915524A>C,NC_000012.11:g.112915524A>G | OMIM Allelic Variant:176876.0004 | C0028326 Noonan syndrome; C0041409 163950 Noonan syndrome 1; CN221809 not provided; CN166718 Rasopathy | | |
NM_002834.3(PTPN11):c.1174G>A (p.Ala392Thr) | 5781 | PTPN11 | Likely pathogenic | 774356443 | RCV000209886; | N | MedGen:C0041409,OMIM:163950 | 12 | 112919959 | 112919959 | NM_002834.3:c.1174G>A | NP_002825.3:p.Ala392Thr | NC_000012.11:g.112919959G>A | - | C0041409 163950 Noonan syndrome 1 | | |
NM_002834.3(PTPN11):c.1232C>T (p.Thr411Met) | 5781 | PTPN11 | Pathogenic | 121918467 | RCV000014269; | N | MedGen:C0041409,OMIM:163950 | 12 | 112924286 | 112924286 | NM_002834.3:c.1232C>T | NP_002825.3:p.Thr411Met | NC_000012.11:g.112924286C>T | OMIM Allelic Variant:176876.0019 | C0041409 163950 Noonan syndrome 1 | | |
NM_002834.3(PTPN11):c.1403C>T (p.Thr468Met) | 5781 | PTPN11 | Likely pathogenic;Pathogenic | 121918457 | RCV000106323; RCV000208002; RCV000055884; RCV000157014; RCV000033533; RCV000077851; | N | MedGen:C0028326, Orphanet:ORPHA648,SNOMED CT:205824006; MedGen:C0041409,OMIM:163950; MedGen:C0175704, Orphanet:ORPHA500; MedGen:CN074218,OMIM:151100; MedGen:CN166718; MedGen:CN221809 | 12 | 112926270 | 112926270 | NM_002834.3:c.1403C>T | NP_002825.3:p.Thr468Met | NC_000012.11:g.112926270C>T | HGMD:CM021672,OMIM Allelic Variant:176876.0006 | CN074218 151100 LEOPARD syndrome 1; C0028326 Noonan syndrome; C0041409 163950 Noonan syndrome 1; C0175704 Noonan syndrome with multiple lentigines; CN221809 not provided; CN166718 Rasopathy | | |
NM_002834.3(PTPN11):c.1504T>A (p.Ser502Thr) | 5781 | PTPN11 | Pathogenic | 121918458 | RCV000014260; RCV000156995; RCV000033543; RCV000212897; | N | MedGen:C0028326, Orphanet:ORPHA648,SNOMED CT:205824006; MedGen:C0041409,OMIM:163950; MedGen:CN166718; MedGen:CN221809 | 12 | 112926884 | 112926884 | NM_002834.3:c.1504T>A | NP_002825.3:p.Ser502Thr | NC_000012.11:g.112926884T>A,NC_000012.11:g.112926884T>G | OMIM Allelic Variant:176876.0007 | C0028326 Noonan syndrome; C0041409 163950 Noonan syndrome 1; CN221809 not provided; CN166718 Rasopathy | | |
NM_002834.3(PTPN11):c.1529A>G (p.Gln510Arg) | 5781 | PTPN11 | Pathogenic | 121918470 | RCV000014273; | N | MedGen:C0041409,OMIM:163950 | 12 | 112926909 | 112926909 | NM_002834.3:c.1529A>G | NP_002825.3:p.Gln510Arg | NC_000012.11:g.112926909A>C,NC_000012.11:g.112926909A>G | OMIM Allelic Variant:176876.0023 | C0041409 163950 Noonan syndrome 1 | | |