Variation_Name | GeneID | GeneSymbol | ClinicalSignificance | dbSNP | RCVaccession | TestedInGTR | PhenotypeIDs | Chromosome | Start | Stop | HGVS_c | HGVS_p | HGVS_g | OtherIDs | Disease_ClinVar | Disease_hgmd | NC_000023.11:g.(?_120431323)_(120441894_?)del | 3920 | LAMP2 | Likely pathogenic | -1 | RCV000156447; | N | MedGen:C0878677,OMIM:300257,ORPHA:34587,SNOMED CT:419097006 | X | 119565178 | 119575749 | - | - | | - | C0878677 300257 Danon disease | | |
NM_013995.2(LAMP2):c.1189G>A (p.Val397Ile) | 3920 | LAMP2 | Likely benign | 730880488 | RCV000157977; | N | MedGen:C0878544, Orphanet:ORPHA167848,SNOMED CT:85898001; MedGen:C0878677,OMIM:300257,ORPHA:34587,SNOMED CT:419097006 | X | 119573053 | 119573053 | NM_013995.2:c.1189G>A | NP_054701.1:p.Val397Ile | NC_000023.10:g.119573053C>T | - | C0878544 Cardiomyopathy; C0878677 300257 Danon disease | | |
NM_002294.2(LAMP2):c.1093+1G>A | 3920 | LAMP2 | Pathogenic | 727504742 | RCV000156041; | N | MedGen:C0878677,OMIM:300257,ORPHA:34587,SNOMED CT:419097006 | X | 119575584 | 119575584 | NM_002294.2:c.1093+1G>A | | NC_000023.10:g.119575584C>T | - | C0878677 300257 Danon disease | | |
NM_002294.2(LAMP2):c.1020delT (p.Gly341Glufs) | 3920 | LAMP2 | Pathogenic | 727504597 | RCV000155777; | N | MedGen:C0878677,OMIM:300257,ORPHA:34587,SNOMED CT:419097006 | X | 119575658 | 119575658 | NM_002294.2:c.1020delT | NP_002285.1:p.Gly341Glufs | NC_000023.10:g.119575658delA | - | C0878677 300257 Danon disease | | |
NM_002294.2(LAMP2):c.999delA (p.Glu334Serfs) | 3920 | LAMP2 | Likely pathogenic | 727504557 | RCV000155721; | N | MedGen:C0878677,OMIM:300257,ORPHA:34587,SNOMED CT:419097006 | X | 119575679 | 119575679 | NM_002294.2:c.999delA | NP_002285.1:p.Glu334Serfs | NC_000023.10:g.119575679delT | - | C0878677 300257 Danon disease | | |
NM_001122606.1(LAMP2):c.961T>C (p.Trp321Arg) | 3920 | LAMP2 | Pathogenic | 104894859 | RCV000010664; | N | MedGen:C0878677,OMIM:300257,ORPHA:34587,SNOMED CT:419097006 | X | 119575717 | 119575717 | NM_001122606.1:c.961T>C | NP_001116078.1:p.Trp321Arg | NC_000023.10:g.119575717A>G | OMIM Allelic Variant:309060.0011 | C0878677 300257 Danon disease | | |
NM_002294.2(LAMP2):c.929-1G>A | 3920 | LAMP2 | Likely pathogenic | 727504262 | RCV000154245; | N | MedGen:C0878677,OMIM:300257,ORPHA:34587,SNOMED CT:419097006 | X | 119575750 | 119575750 | NM_002294.2:c.929-1G>A | | NC_000023.10:g.119575750C>T | - | C0878677 300257 Danon disease | | |
NM_002294.2(LAMP2):c.928G>A (p.Val310Ile) | 3920 | LAMP2 | Pathogenic | 104894858 | RCV000010663; RCV000157981; | N | MedGen:C0878677,OMIM:300257,ORPHA:34587,SNOMED CT:419097006; MedGen:CN221809 | X | 119576454 | 119576454 | NM_002294.2:c.928G>A | NP_002285.1:p.Val310Ile | NC_000023.10:g.119576454C>T | OMIM Allelic Variant:309060.0010 | C0878677 300257 Danon disease; CN221809 not provided | | |
NM_002294.2(LAMP2):c.912T>G (p.Tyr304Ter) | 3920 | LAMP2 | Likely pathogenic | -1 | RCV000219626; | N | MedGen:C0878677,OMIM:300257,ORPHA:34587,SNOMED CT:419097006 | X | 119576470 | 119576470 | NM_002294.2:c.912T>G | NP_002285.1:p.Tyr304Ter | | - | C0878677 300257 Danon disease | | |
NM_002294.2(LAMP2):c.877C>T (p.Arg293Ter) | 3920 | LAMP2 | Pathogenic | 727503118 | RCV000150911; | N | MedGen:C0878677,OMIM:300257,ORPHA:34587,SNOMED CT:419097006 | X | 119576505 | 119576505 | NM_002294.2:c.877C>T | NP_002285.1:p.Arg293Ter | NC_000023.10:g.119576505G>A | - | C0878677 300257 Danon disease | | |
NM_002294.2(LAMP2):c.865-1G>C | 3920 | LAMP2 | Likely pathogenic | 397516752 | RCV000037433; | N | MedGen:C0878677,OMIM:300257,ORPHA:34587,SNOMED CT:419097006 | X | 119576518 | 119576518 | NM_002294.2:c.865-1G>C | | NC_000023.10:g.119576518C>G | - | C0878677 300257 Danon disease | | |
NM_002294.2(LAMP2):c.864+3_864+6delGAGT | 3920 | LAMP2 | Likely pathogenic;Pathogenic | 397516751 | RCV000037432; RCV000157986; | N | MedGen:C0878544, Orphanet:ORPHA167848,SNOMED CT:85898001; MedGen:C0878677,OMIM:300257,ORPHA:34587,SNOMED CT:419097006 | X | 119580154 | 119580157 | NM_002294.2:c.864+3_864+6delGAGT | | NC_000023.10:g.119580154_119580157delACTC | - | C0878544 Cardiomyopathy; C0878677 300257 Danon disease | | |
NM_002294.2(LAMP2):c.864+1G>T | 3920 | LAMP2 | Pathogenic | 727503119 | RCV000150912; RCV000157972; | N | MedGen:C0878677,OMIM:300257,ORPHA:34587,SNOMED CT:419097006; MedGen:CN221809 | X | 119580159 | 119580159 | NM_002294.2:c.864+1G>T | | NC_000023.10:g.119580159C>A,NC_000023.10:g.119580159C>T | - | C0878677 300257 Danon disease; CN221809 not provided | | |
NM_002294.2(LAMP2):c.851_852delTT (p.Phe284Cysfs) | 3920 | LAMP2 | Pathogenic | 727504648 | RCV000155911; | N | MedGen:C0878677,OMIM:300257,ORPHA:34587,SNOMED CT:419097006 | X | 119580172 | 119580173 | NM_002294.2:c.851_852delTT | NP_002285.1:p.Phe284Cysfs | NC_000023.10:g.119580172_119580173delAA | - | C0878677 300257 Danon disease | | |
NM_002294.2(LAMP2):c.830G>A (p.Ser277Asn) | 3920 | LAMP2 | Uncertain significance | 730880484 | RCV000157970; | N | MedGen:C0878544, Orphanet:ORPHA167848,SNOMED CT:85898001; MedGen:C0878677,OMIM:300257,ORPHA:34587,SNOMED CT:419097006 | X | 119580194 | 119580194 | NM_002294.2:c.830G>A | NP_002285.1:p.Ser277Asn | NC_000023.10:g.119580194C>T | - | C0878544 Cardiomyopathy; C0878677 300257 Danon disease | | |
NM_002294.2(LAMP2):c.795C>A (p.Cys265Ter) | 3920 | LAMP2 | Likely pathogenic;Pathogenic | 730880483 | RCV000208028; RCV000157969; | N | MedGen:C0878677,OMIM:300257,ORPHA:34587,SNOMED CT:419097006; MedGen:CN221809 | X | 119580229 | 119580229 | NM_002294.2:c.795C>A | NP_002285.1:p.Cys265Ter | NC_000023.10:g.119580229G>T | - | C0878677 300257 Danon disease; CN221809 not provided | | |
NM_002294.2(LAMP2):c.742-10_742-8delTCT | 3920 | LAMP2 | Benign | 730880476 | RCV000157956; | N | MedGen:C0878544, Orphanet:ORPHA167848,SNOMED CT:85898001; MedGen:C0878677,OMIM:300257,ORPHA:34587,SNOMED CT:419097006 | X | 119580290 | 119580292 | NM_002294.2:c.742-10_742-8delTCT | | NC_000023.10:g.119580290_119580292delAGA | - | C0878544 Cardiomyopathy; C0878677 300257 Danon disease | | |
NM_002294.2(LAMP2):c.661G>A (p.Gly221Arg) | 3920 | LAMP2 | Likely benign | 145169006 | RCV000037424; RCV000157955; | N | MedGen:C0878544, Orphanet:ORPHA167848,SNOMED CT:85898001; MedGen:C0878677,OMIM:300257,ORPHA:34587,SNOMED CT:419097006; MedGen:CN169374 | X | 119581776 | 119581776 | NM_002294.2:c.661G>A | NP_002285.1:p.Gly221Arg | NC_000023.10:g.119581776C>T | - | C0878544 Cardiomyopathy; C0878677 300257 Danon disease; CN169374 not specified | | |
NM_001122606.1(LAMP2):c.651dupA (p.Pro218Thrfs) | 3920 | LAMP2 | Pathogenic | 730880493 | RCV000157985; | N | MedGen:C0878544, Orphanet:ORPHA167848,SNOMED CT:85898001; MedGen:C0878677,OMIM:300257,ORPHA:34587,SNOMED CT:419097006 | X | 119581786 | 119581786 | NM_001122606.1:c.651dupA | NP_001116078.1:p.Pro218Thrfs | NC_000023.10:g.119581786dupT | - | C0878544 Cardiomyopathy; C0878677 300257 Danon disease | | |
NM_002294.2(LAMP2):c.588_589insCAACA (p.Val197Glnfs) | 3920 | LAMP2 | Pathogenic | 730880492 | RCV000157984; | N | MedGen:C0878544, Orphanet:ORPHA167848,SNOMED CT:85898001; MedGen:C0878677,OMIM:300257,ORPHA:34587,SNOMED CT:419097006 | X | 119581848 | 119581849 | NM_002294.2:c.588_589insCAACA | NP_002285.1:p.Val197Glnfs | NC_000023.10:g.119581848_119581849insTGTTG | - | C0878544 Cardiomyopathy; C0878677 300257 Danon disease | | |
NM_001122606.1(LAMP2):c.520C>T (p.Gln174Ter) | 3920 | LAMP2 | Pathogenic | 104894857 | RCV000010662; | N | MedGen:C0878677,OMIM:300257,ORPHA:34587,SNOMED CT:419097006 | X | 119582861 | 119582861 | NM_001122606.1:c.520C>T | NP_001116078.1:p.Gln174Ter | NC_000023.10:g.119582861G>A | OMIM Allelic Variant:309060.0009 | C0878677 300257 Danon disease | | |
NM_002294.2(LAMP2):c.463delA (p.Ser155Valfs) | 3920 | LAMP2 | Likely pathogenic | 193922649 | RCV000030113; RCV000037418; | N | MedGen:C0878677,OMIM:300257,ORPHA:34587,SNOMED CT:419097006; MedGen:C0949658, Orphanet:ORPHA155, Orphanet:ORPHA99739,SNOMED CT:83978005 | X | 119582918 | 119582918 | NM_002294.2:c.463delA | NP_002285.1:p.Ser155Valfs | NC_000023.10:g.119582918delT | - | C0878677 300257 Danon disease; C0949658 Primary familial hypertrophic cardiomyopathy | | |
NM_001122606.1(LAMP2):c.440T>A (p.Leu147Ter) | 3920 | LAMP2 | Pathogenic | 137852527 | RCV000010655; | N | MedGen:C0878677,OMIM:300257,ORPHA:34587,SNOMED CT:419097006 | X | 119582941 | 119582941 | NM_001122606.1:c.440T>A | NP_001116078.1:p.Leu147Ter | NC_000023.10:g.119582941A>T | OMIM Allelic Variant:309060.0002 | C0878677 300257 Danon disease | | |
NM_002294.2(LAMP2):c.294G>A (p.Trp98Ter) | 3920 | LAMP2 | Pathogenic | -1 | RCV000223450; | N | MedGen:C0878677,OMIM:300257,ORPHA:34587,SNOMED CT:419097006 | X | 119589315 | 119589315 | NM_002294.2:c.294G>A | NP_002285.1:p.Trp98Ter | | - | C0878677 300257 Danon disease | | |
NM_013995.2(LAMP2):c.293G>A (p.Trp98Ter) | 3920 | LAMP2 | Pathogenic | 397516740 | RCV000037412; RCV000157963; | N | MedGen:C0878677,OMIM:300257,ORPHA:34587,SNOMED CT:419097006; MedGen:CN221809 | X | 119589316 | 119589316 | NM_013995.2:c.293G>A | NP_054701.1:p.Trp98Ter | | - | C0878677 300257 Danon disease; CN221809 not provided | | |
NM_002294.2(LAMP2):c.277G>A (p.Gly93Arg) | 3920 | LAMP2 | Likely benign;Uncertain significance | 727504953 | RCV000156356; RCV000157962; | N | MedGen:C0878544, Orphanet:ORPHA167848,SNOMED CT:85898001; MedGen:C0878677,OMIM:300257,ORPHA:34587,SNOMED CT:419097006; MedGen:CN169374 | X | 119589332 | 119589332 | NM_002294.2:c.277G>A | NP_002285.1:p.Gly93Arg | NC_000023.10:g.119589332C>T | - | C0878544 Cardiomyopathy; C0878677 300257 Danon disease; CN169374 not specified | | |
NM_001122606.1(LAMP2):c.217dupA (p.Thr73Asnfs) | 3920 | LAMP2 | Likely pathogenic | 397516739 | RCV000037411; | N | MedGen:C0878677,OMIM:300257,ORPHA:34587,SNOMED CT:419097006 | X | 119589392 | 119589392 | NM_001122606.1:c.217dupA | NP_001116078.1:p.Thr73Asnfs | NC_000023.10:g.119589392dupT | - | C0878677 300257 Danon disease | | |
NM_001122606.1(LAMP2):c.191delT (p.Val64Glufs) | 3920 | LAMP2 | Likely pathogenic | 397516738 | RCV000037410; | N | MedGen:C0878677,OMIM:300257,ORPHA:34587,SNOMED CT:419097006 | X | 119589418 | 119589418 | NM_001122606.1:c.191delT | NP_001116078.1:p.Val64Glufs | NC_000023.10:g.119589418delA | - | C0878677 300257 Danon disease | | |
NM_002294.2(LAMP2):c.183+1G>A | 3920 | LAMP2 | Likely pathogenic | 727503120 | RCV000150913; | N | MedGen:C0878677,OMIM:300257,ORPHA:34587,SNOMED CT:419097006 | X | 119590505 | 119590505 | NM_002294.2:c.183+1G>A | | NC_000023.10:g.119590505C>T | - | C0878677 300257 Danon disease | | |
NM_001122606.1(LAMP2):c.183T>A (p.Tyr61Ter) | 3920 | LAMP2 | Likely pathogenic | 397516736 | RCV000037407; | N | MedGen:C0878677,OMIM:300257,ORPHA:34587,SNOMED CT:419097006 | X | 119590506 | 119590506 | NM_001122606.1:c.183T>A | NP_001116078.1:p.Tyr61Ter | NC_000023.10:g.119590506A>C,NC_000023.10:g.119590506A>T | - | C0878677 300257 Danon disease | | |
NM_001122606.1(LAMP2):c.183T>G (p.Tyr61Ter) | 3920 | LAMP2 | Likely pathogenic | 397516736 | RCV000037408; | N | MedGen:C0878677,OMIM:300257,ORPHA:34587,SNOMED CT:419097006 | X | 119590506 | 119590506 | NM_001122606.1:c.183T>G | NP_001116078.1:p.Tyr61Ter | NC_000023.10:g.119590506A>C,NC_000023.10:g.119590506A>T | - | C0878677 300257 Danon disease | | |
NM_002294.2(LAMP2):c.128_129dupAT (p.Ala44Metfs) | 3920 | LAMP2 | Likely pathogenic | 730880344 | RCV000154670; | N | MedGen:C0878677,OMIM:300257,ORPHA:34587,SNOMED CT:419097006 | X | 119590560 | 119590561 | NM_002294.2:c.128_129dupAT | NP_002285.1:p.Ala44Metfs | NC_000023.10:g.119590560_119590561dupAT | - | C0878677 300257 Danon disease | | |
NM_002294.2(LAMP2):c.121delT (p.Cys41Alafs) | 3920 | LAMP2 | Pathogenic | 727504600 | RCV000155846; | N | MedGen:C0878677,OMIM:300257,ORPHA:34587,SNOMED CT:419097006 | X | 119590568 | 119590568 | NM_002294.2:c.121delT | NP_002285.1:p.Cys41Alafs | NC_000023.10:g.119590568delA | - | C0878677 300257 Danon disease | | |
NM_002294.2(LAMP2):c.65-2A>G | 3920 | LAMP2 | Pathogenic | 397516743 | RCV000037416; | N | MedGen:C0878677,OMIM:300257,ORPHA:34587,SNOMED CT:419097006 | X | 119590626 | 119590626 | NM_002294.2:c.65-2A>G | | NC_000023.10:g.119590626T>C | - | C0878677 300257 Danon disease | | |
NM_002294.2(LAMP2):c.-23_-15delGTCGCCGCC | 3920 | LAMP2 | Benign;Likely benign | 193922648 | RCV000030112; RCV000037402; RCV000157958; | N | MedGen:C0878544, Orphanet:ORPHA167848,SNOMED CT:85898001; MedGen:C0878677,OMIM:300257,ORPHA:34587,SNOMED CT:419097006; MedGen:C0949658, Orphanet:ORPHA155, Orphanet:ORPHA99739,SNOMED CT:83978005; MedGen:CN169374 | X | 119603039 | 119603047 | NM_002294.2:c.-23_-15delGTCGCCGCC | | NC_000023.10:g.119603039_119603047delGGCGGCGAC | - | C0878544 Cardiomyopathy; C0878677 300257 Danon disease; CN169374 not specified; C0949658 Primary familial hypertrophic cardiomyopathy | | |
NM_001122606.1(LAMP2):c.-26_-15dupGCCGTCGCCGCC | 3920 | LAMP2 | Uncertain significance | 730880495 | RCV000157988; | N | MedGen:C0878544, Orphanet:ORPHA167848,SNOMED CT:85898001; MedGen:C0878677,OMIM:300257,ORPHA:34587,SNOMED CT:419097006 | X | 119603039 | 119603050 | NM_001122606.1:c.-26_-15dupGCCGTCGCCGCC | | NC_000023.10:g.119603039_119603050dupGGCGGCGACGGC | - | C0878544 Cardiomyopathy; C0878677 300257 Danon disease | | |