Variation_Name | GeneID | GeneSymbol | ClinicalSignificance | dbSNP | RCVaccession | TestedInGTR | PhenotypeIDs | Chromosome | Start | Stop | HGVS_c | HGVS_p | HGVS_g | OtherIDs | Disease_ClinVar | Disease_hgmd | NM_003688.3(CASK):c.2531_2532delAG (p.Glu844Valfs) | 8573 | CASK | Pathogenic | 797045433 | RCV000194553; | N | MedGen:C2677903,OMIM:300749,ORPHA:163937 | X | 41383261 | 41383262 | NM_003688.3:c.2531_2532delAG | NP_003679.2:p.Glu844Valfs | NC_000023.10:g.41383261_41383262delCT | - | C2677903 300749 Mental retardation and microcephaly with pontine and cerebellar hypoplasia | | |
NM_003688.3(CASK):c.2470C>T (p.Gln824Ter) | 8573 | CASK | Pathogenic | 587783364 | RCV000145402; | N | MedGen:C2677903,OMIM:300749,ORPHA:163937 | X | 41390295 | 41390295 | NM_003688.3:c.2470C>T | NP_003679.2:p.Gln824Ter | NC_000023.10:g.41390295G>A | - | C2677903 300749 Mental retardation and microcephaly with pontine and cerebellar hypoplasia | | |
NM_003688.3(CASK):c.2427G>A (p.Ala809=) | 8573 | CASK | Uncertain significance | 141158465 | RCV000145401; | N | MedGen:C2677903,OMIM:300749,ORPHA:163937 | X | 41390338 | 41390338 | NM_003688.3:c.2427G>A | NP_003679.2:p.Ala809= | NC_000023.10:g.41390338C>T | - | C2677903 300749 Mental retardation and microcephaly with pontine and cerebellar hypoplasia | | |
NM_003688.3(CASK):c.2377C>T (p.Gln793Ter) | 8573 | CASK | Pathogenic | 749742837 | RCV000193508; | N | MedGen:C2677903,OMIM:300749,ORPHA:163937 | X | 41390388 | 41390388 | NM_003688.3:c.2377C>T | NP_003679.2:p.Gln793Ter | NC_000023.10:g.41390388G>A | - | C2677903 300749 Mental retardation and microcephaly with pontine and cerebellar hypoplasia | | |
NM_003688.3(CASK):c.2303-2A>G | 8573 | CASK | Pathogenic | 863224854 | RCV000198342; | N | MedGen:C2677903,OMIM:300749,ORPHA:163937 | X | 41390464 | 41390464 | NM_003688.3:c.2303-2A>G | | NC_000023.10:g.41390464T>C | - | C2677903 300749 Mental retardation and microcephaly with pontine and cerebellar hypoplasia | | |
NM_003688.3(CASK):c.2168A>G (p.Tyr723Cys) | 8573 | CASK | Likely pathogenic;Pathogenic | 398122844 | RCV000193589; RCV000022829; | N | MedGen:C1845546,OMIM:300422; MedGen:C2677903,OMIM:300749,ORPHA:163937 | X | 41394199 | 41394199 | NM_003688.3:c.2168A>G | NP_003679.2:p.Tyr723Cys | NC_000023.10:g.41394199T>C | OMIM Allelic Variant:300172.0008 | C1845546 300422 FG syndrome 4; C2677903 300749 Mental retardation and microcephaly with pontine and cerebellar hypoplasia | | |
NM_003688.3(CASK):c.2074C>T (p.Gln692Ter) | 8573 | CASK | Pathogenic | 587783361 | RCV000145398; | N | MedGen:C2677903,OMIM:300749,ORPHA:163937 | X | 41402025 | 41402025 | NM_003688.3:c.2074C>T | NP_003679.2:p.Gln692Ter | NC_000023.10:g.41402025G>A | - | C2677903 300749 Mental retardation and microcephaly with pontine and cerebellar hypoplasia | | |
NM_003688.3(CASK):c.2041C>T (p.Arg681Ter) | 8573 | CASK | Pathogenic | 587783360 | RCV000145397; | N | MedGen:C2677903,OMIM:300749,ORPHA:163937 | X | 41402058 | 41402058 | NM_003688.3:c.2041C>T | NP_003679.2:p.Arg681Ter | NC_000023.10:g.41402058G>A | - | C2677903 300749 Mental retardation and microcephaly with pontine and cerebellar hypoplasia | | |
NM_003688.3(CASK):c.2039G>C (p.Trp680Ser) | 8573 | CASK | Uncertain significance | 587783358 | RCV000145395; | N | MedGen:C2677903,OMIM:300749,ORPHA:163937 | X | 41412972 | 41412972 | NM_003688.3:c.2039G>C | NP_003679.2:p.Trp680Ser | NC_000023.10:g.41412972C>G | - | C2677903 300749 Mental retardation and microcephaly with pontine and cerebellar hypoplasia | | |
NM_003688.3(CASK):c.1981delC (p.Leu661Trpfs) | 8573 | CASK | Pathogenic | 797045431 | RCV000194542; | N | MedGen:C2677903,OMIM:300749,ORPHA:163937 | X | 41413030 | 41413030 | NM_003688.3:c.1981delC | NP_003679.2:p.Leu661Trpfs | NC_000023.10:g.41413030delG | - | C2677903 300749 Mental retardation and microcephaly with pontine and cerebellar hypoplasia | | |
NM_003688.3(CASK):c.1976G>A (p.Gly659Asp) | 8573 | CASK | Pathogenic | 727505397 | RCV000157068; | N | MedGen:C2677903,OMIM:300749,ORPHA:163937 | X | 41413035 | 41413035 | NM_003688.3:c.1976G>A | NP_003679.2:p.Gly659Asp | NC_000023.10:g.41413035C>T | - | C2677903 300749 Mental retardation and microcephaly with pontine and cerebellar hypoplasia | | |
NM_003688.3(CASK):c.1915C>T (p.Arg639Ter) | 8573 | CASK | Pathogenic | 137852815 | RCV000012286; | N | MedGen:C2677903,OMIM:300749,ORPHA:163937 | X | 41413096 | 41413096 | NM_003688.3:c.1915C>T | NP_003679.2:p.Arg639Ter | NC_000023.10:g.41413096G>A | OMIM Allelic Variant:300172.0001 | C2677903 300749 Mental retardation and microcephaly with pontine and cerebellar hypoplasia | | |
NM_003688.3(CASK):c.1644_1645delAG (p.Val549Glyfs) | 8573 | CASK | Pathogenic | 587783357 | RCV000145394; | N | MedGen:C2677903,OMIM:300749,ORPHA:163937 | X | 41420835 | 41420836 | NM_003688.3:c.1644_1645delAG | NP_003679.2:p.Val549Glyfs | NC_000023.10:g.41420835_41420836delCT | - | C2677903 300749 Mental retardation and microcephaly with pontine and cerebellar hypoplasia | | |
NM_003688.3(CASK):c.1639C>T (p.Gln547Ter) | 8573 | CASK | Pathogenic | 387906705 | RCV000022833; | N | MedGen:C2677903,OMIM:300749,ORPHA:163937 | X | 41420841 | 41420841 | NM_003688.3:c.1639C>T | NP_003679.2:p.Gln547Ter | NC_000023.10:g.41420841G>A | OMIM Allelic Variant:300172.0012 | C2677903 300749 Mental retardation and microcephaly with pontine and cerebellar hypoplasia | | |
NM_003688.3(CASK):c.1269C>T (p.Asn423=) | 8573 | CASK | Uncertain significance | 17315800 | RCV000145393; | N | MedGen:C2677903,OMIM:300749,ORPHA:163937 | X | 41446205 | 41446205 | NM_003688.3:c.1269C>T | NP_003679.2:p.Asn423= | NC_000023.10:g.41446205G>A | - | C2677903 300749 Mental retardation and microcephaly with pontine and cerebellar hypoplasia | | |
NM_003688.3(CASK):c.915G>A (p.Lys305=) | 8573 | CASK | Pathogenic | 387906499 | RCV000012287; | N | MedGen:C2677903,OMIM:300749,ORPHA:163937 | X | 41495831 | 41495831 | NM_003688.3:c.915G>A | NP_003679.2:p.Lys305= | NC_000023.10:g.41495831C>T | OMIM Allelic Variant:300172.0002 | C2677903 300749 Mental retardation and microcephaly with pontine and cerebellar hypoplasia | | |
NM_003688.3(CASK):c.880C>T (p.Gln294Ter) | 8573 | CASK | Pathogenic | 587783371 | RCV000145416; | N | MedGen:C2677903,OMIM:300749,ORPHA:163937 | X | 41495866 | 41495866 | NM_003688.3:c.880C>T | NP_003679.2:p.Gln294Ter | NC_000023.10:g.41495866G>A | - | C2677903 300749 Mental retardation and microcephaly with pontine and cerebellar hypoplasia | | |
NM_003688.3(CASK):c.764G>A (p.Arg255His) | 8573 | CASK | Likely pathogenic | 587783369 | RCV000145413; | N | MedGen:C2677903,OMIM:300749,ORPHA:163937 | X | 41519759 | 41519759 | NM_003688.3:c.764G>A | NP_003679.2:p.Arg255His | NC_000023.10:g.41519759C>T | - | C2677903 300749 Mental retardation and microcephaly with pontine and cerebellar hypoplasia | | |
NM_003688.3(CASK):c.708+1G>A | 8573 | CASK | Pathogenic | 587783368 | RCV000145411; | N | MedGen:C2677903,OMIM:300749,ORPHA:163937 | X | 41524529 | 41524529 | NM_003688.3:c.708+1G>A | | NC_000023.10:g.41524529C>T | - | C2677903 300749 Mental retardation and microcephaly with pontine and cerebellar hypoplasia | | |
NM_003688.3(CASK):c.617G>A (p.Gly206Asp) | 8573 | CASK | Uncertain significance | 587783367 | RCV000145409; | N | MedGen:C2677903,OMIM:300749,ORPHA:163937 | X | 41524621 | 41524621 | NM_003688.3:c.617G>A | NP_003679.2:p.Gly206Asp | NC_000023.10:g.41524621C>T | - | C2677903 300749 Mental retardation and microcephaly with pontine and cerebellar hypoplasia | | |
NM_003688.3(CASK):c.430-2A>T | 8573 | CASK | Pathogenic | 587783366 | RCV000145406; | N | MedGen:C2677903,OMIM:300749,ORPHA:163937 | X | 41530785 | 41530785 | NM_003688.3:c.430-2A>T | | NC_000023.10:g.41530785T>A | - | C2677903 300749 Mental retardation and microcephaly with pontine and cerebellar hypoplasia | | |
NM_003688.3(CASK):c.316C>T (p.Arg106Ter) | 8573 | CASK | Pathogenic | 387906704 | RCV000022831; | N | MedGen:C2677903,OMIM:300749,ORPHA:163937 | X | 41604817 | 41604817 | NM_003688.3:c.316C>T | NP_003679.2:p.Arg106Ter | NC_000023.10:g.41604817G>A | OMIM Allelic Variant:300172.0010 | C2677903 300749 Mental retardation and microcephaly with pontine and cerebellar hypoplasia | | |
NM_003688.3(CASK):c.79C>T (p.Arg27Ter) | 8573 | CASK | Pathogenic | 794727270 | RCV000175755; RCV000175756; | N | MedGen:C1845546,OMIM:300422; MedGen:C2677903,OMIM:300749,ORPHA:163937 | X | 41712461 | 41712461 | NM_003688.3:c.79C>T | NP_003679.2:p.Arg27Ter | NC_000023.10:g.41712461G>A | - | C1845546 300422 FG syndrome 4; C2677903 300749 Mental retardation and microcephaly with pontine and cerebellar hypoplasia | | |
NM_003688.3(CASK):c.55G>A (p.Gly19Arg) | 8573 | CASK | Likely pathogenic;Uncertain significance | 727503840 | RCV000173304; RCV000173305; RCV000152930; | N | MedGen:C1845546,OMIM:300422; MedGen:C2677903,OMIM:300749,ORPHA:163937; MedGen:CN221809 | X | 41782187 | 41782187 | NM_003688.3:c.55G>A | NP_003679.2:p.Gly19Arg | NC_000023.10:g.41782187C>T | - | C1845546 300422 FG syndrome 4; C2677903 300749 Mental retardation and microcephaly with pontine and cerebellar hypoplasia; CN221809 not provided | | |
NM_003688.3(CASK):c.20_27delTGTTCGAG (p.Leu7Argfs) | 8573 | CASK | Pathogenic | 587783362 | RCV000145399; | N | MedGen:C2677903,OMIM:300749,ORPHA:163937 | X | 41782215 | 41782222 | NM_003688.3:c.20_27delTGTTCGAG | NP_003679.2:p.Leu7Argfs | NC_000023.10:g.41782215_41782222delCTCGAACA | - | C2677903 300749 Mental retardation and microcephaly with pontine and cerebellar hypoplasia | | |