Human Phenotype Ontology 
Grandparent Node:
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Abnormal oral morphology (HP:0031816)help
Parent Node:
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Oral cleft (HP:0000202)help
..Starting node
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Cleft lip (HP:0410030)help
Term ID: 410030
Name: Cleft lip
Synonym: Cleft lip; Cleft of the lip
Definition: A gap in the lip or lips.
Comments:
Reference: HP:0410030
Genes and Diseases:
 
       Child Nodes:
........expandCleft upper lip (HP:0000204) help
................... HP:0000161 Median cleft lip
................... HP:0009101 Submucous cleft lip
................... HP:0011340 Incomplete cleft of the upper lip
................... HP:0100335 Non-midline cleft lip
........expandCleft lower lip (HP:0010281) help

 Sister Nodes: 
..expandCleft palate (HP:0000175) help
InputHPO IDHPO termDistanceGeneGene id entrezHGNC IDDiseaseIdDiseaseNameFrequencyOnsetHGMD variantsClinVar variants
 
HPO disease - gene - phenotype typical associations:
 
HPO disease - gene - phenotype less frequent non-typical associations:
HP:0410030HP:0410030Cleft lip0ACTB CL E G H60132OMIM:243310Baraitser-Winter syndrome 172
HP:0410030HP:0410030Cleft lip0ACTB CL E G H60132OMIM:607371Dystonia, juvenile-onset72
HP:0410030HP:0410030Cleft lip0ADA2 CL E G H518161839ORPHA:124Blackfan-Diamond anemiaHP:0040283 - Occasional22
HP:0410030HP:0410030Cleft lip0ALX3 CL E G H257449OMIM:136760Frontonasal dysplasia 19
HP:0410030HP:0410030Cleft lip0ALX4 CL E G H60529450ORPHA:60015Enlarged parietal foraminaHP:0040284 - Very rare132
HP:0410030HP:0410030Cleft lip0AMER1 CL E G H13928526837OMIM:300373Osteopathia striata with cranial sclerosis34
HP:0410030HP:0410030Cleft lip0ANKRD17 CL E G H2605723575OMIM:619504CHOPRA-AMIEL-GORDON SYNDROME; CAGS2
HP:0410030HP:0410030Cleft lip0ARHGAP31 CL E G H5751429216OMIM:100300Adams-Oliver syndrome 1147
HP:0410030HP:0410030Cleft lip0ASXL1 CL E G H17102318318ORPHA:97297Bohring-Opitz syndromeHP:0040283 - Occasional145
HP:0410030HP:0410030Cleft lip0ASXL1 CL E G H17102318318OMIM:605039Bohring-Opitz syndrome145
HP:0410030HP:0410030Cleft lip0B3GALT6 CL E G H12679217978ORPHA:2725Eye defects-arachnodactyly-cardiopathy syndrome38
HP:0410030HP:0410030Cleft lip0B3GLCT CL E G H14517320207ORPHA:709Peters plus syndrome36
HP:0410030HP:0410030Cleft lip0B3GLCT CL E G H14517320207OMIM:261540Peters-Plus syndrome36
HP:0410030HP:0410030Cleft lip0BCOR CL E G H5488020893OMIM:309800Microphthalmia, syndromic 1101
HP:0410030HP:0410030Cleft lip0BMP4 CL E G H6521071OMIM:600625OROFACIAL CLEFT 11; OFC1138
HP:0410030HP:0410030Cleft lip0C2CD3 CL E G H2600524564OMIM:615948Orofaciodigital syndrome XIV.27
HP:0410030HP:0410030Cleft lip0CC2D2A CL E G H5754529253OMIM:612284Meckel syndrome, type 6247
HP:0410030HP:0410030Cleft lip0CCDC32 CL E G H9041628295OMIM:619123CARDIOFACIONEURODEVELOPMENTAL SYNDROME; CFNDS1
HP:0410030HP:0410030Cleft lip0CDH1 CL E G H9991748ORPHA:1997Blepharo-cheilo-odontic syndrome1003
HP:0410030HP:0410030Cleft lip0CDH1 CL E G H9991748OMIM:119580Blepharocheilodontic syndrome 11003
HP:0410030HP:0410030Cleft lip0CDH1 CL E G H9991748OMIM:137215Gastric cancer, hereditary diffuse1003
HP:0410030HP:0410030Cleft lip0CDON CL E G H5093717104ORPHA:93925Alobar holoprosencephaly200
HP:0410030HP:0410030Cleft lip0CDON CL E G H5093717104OMIM:614226Holoprosencephaly 11.200
HP:0410030HP:0410030Cleft lip0CDON CL E G H5093717104ORPHA:93924Lobar holoprosencephaly200
HP:0410030HP:0410030Cleft lip0CDON CL E G H5093717104ORPHA:93926Midline interhemispheric variant of holoprosencephaly200
HP:0410030HP:0410030Cleft lip0CDON CL E G H5093717104ORPHA:220386Semilobar holoprosencephaly200
HP:0410030HP:0410030Cleft lip0CEP120 CL E G H15324126690OMIM:616300Short-Rib thoracic dysplasia 13 with or without polydactyly.7
HP:0410030HP:0410030Cleft lip0CHD7 CL E G H5563620626OMIM:214800Charge syndrome515
HP:0410030HP:0410030Cleft lip0CHD7 CL E G H5563620626ORPHA:138CHARGE syndrome515
HP:0410030HP:0410030Cleft lip0CHD7 CL E G H5563620626OMIM:612370Hypogonadotropic hypogonadism 5 with or without anosmia.515
HP:0410030HP:0410030Cleft lip0CHST14 CL E G H11318924464ORPHA:2953Musculocontractural Ehlers-Danlos syndromeHP:0040283 - Occasional27
HP:0410030HP:0410030Cleft lip0CHUK CL E G H11471974OMIM:619339BARTSOCAS-PAPAS SYNDROME 2; BPS23
HP:0410030HP:0410030Cleft lip0CILK1 CL E G H2285821219OMIM:612651ENDOCRINE-CEREBROOSTEODYSPLASIA
HP:0410030HP:0410030Cleft lip0COLEC10 CL E G H105842220OMIM:2483403MC syndrome 33
HP:0410030HP:0410030Cleft lip0COLEC11 CL E G H7898917213OMIM:2650503mc syndrome 29
HP:0410030HP:0410030Cleft lip0CPLANE1 CL E G H6525025801OMIM:277170Orofaciodigital syndrome VI
HP:0410030HP:0410030Cleft lip0CPLX1 CL E G H108152309OMIM:194190Wolf-Hirschhorn syndrome1
HP:0410030HP:0410030Cleft lip0CPLX1 CL E G H108152309ORPHA:280Wolf-Hirschhorn syndrome1
HP:0410030HP:0410030Cleft lip0CTBP1 CL E G H14872494ORPHA:280Wolf-Hirschhorn syndrome2
HP:0410030HP:0410030Cleft lip0CTBP1 CL E G H14872494OMIM:194190Wolf-Hirschhorn syndrome2
HP:0410030HP:0410030Cleft lip0CTNND1 CL E G H15002515ORPHA:1997Blepharo-cheilo-odontic syndrome
HP:0410030HP:0410030Cleft lip0CYP26C1 CL E G H34066520577ORPHA:398189Focal facial dermal dysplasia type IV2
HP:0410030HP:0410030Cleft lip0DDX3X CL E G H16542745OMIM:300958MENTAL RETARDATION, X-LINKED 102; MRX10257
HP:0410030HP:0410030Cleft lip0DDX59 CL E G H8347925360ORPHA:2919Orofaciodigital syndrome type 52
HP:0410030HP:0410030Cleft lip0DDX59 CL E G H8347925360OMIM:174300Orofaciodigital syndrome V2
HP:0410030HP:0410030Cleft lip0DEAF1 CL E G H1052214677ORPHA:819Smith-Magenis syndrome33
HP:0410030HP:0410030Cleft lip0DHODH CL E G H17232867ORPHA:246Postaxial acrofacial dysostosis59
HP:0410030HP:0410030Cleft lip0DHODH CL E G H17232867OMIM:263750Postaxial acrofacial dysostosis59
HP:0410030HP:0410030Cleft lip0DISP1 CL E G H8497619711ORPHA:93925Alobar holoprosencephaly22
HP:0410030HP:0410030Cleft lip0DISP1 CL E G H8497619711ORPHA:93924Lobar holoprosencephaly22
HP:0410030HP:0410030Cleft lip0DISP1 CL E G H8497619711ORPHA:93926Midline interhemispheric variant of holoprosencephaly22
HP:0410030HP:0410030Cleft lip0DISP1 CL E G H8497619711ORPHA:220386Semilobar holoprosencephaly22
HP:0410030HP:0410030Cleft lip0DLL1 CL E G H285142908ORPHA:93925Alobar holoprosencephaly3
HP:0410030HP:0410030Cleft lip0DLL1 CL E G H285142908ORPHA:93924Lobar holoprosencephaly3
HP:0410030HP:0410030Cleft lip0DLL1 CL E G H285142908ORPHA:93926Midline interhemispheric variant of holoprosencephaly3
HP:0410030HP:0410030Cleft lip0DLL1 CL E G H285142908ORPHA:220386Semilobar holoprosencephaly3
HP:0410030HP:0410030Cleft lip0DLX4 CL E G H17482917OMIM:616788Orofacial cleft 151
HP:0410030HP:0410030Cleft lip0DSE CL E G H2994021144ORPHA:2953Musculocontractural Ehlers-Danlos syndromeHP:0040283 - Occasional13
HP:0410030HP:0410030Cleft lip0DVL1 CL E G H18553084ORPHA:3107Autosomal dominant Robinow syndrome14
HP:0410030HP:0410030Cleft lip0DVL3 CL E G H18573087ORPHA:3107Autosomal dominant Robinow syndrome5
HP:0410030HP:0410030Cleft lip0DVL3 CL E G H18573087OMIM:616894ROBINOW SYNDROME, AUTOSOMAL DOMINANT 3; DRS35
HP:0410030HP:0410030Cleft lip0DYNC2H1 CL E G H796592962OMIM:613091Asphyxiating thoracic dystrophy 3304
HP:0410030HP:0410030Cleft lip0DYNC2H1 CL E G H796592962ORPHA:93271Short rib-polydactyly syndrome, Verma-Naumoff type304
HP:0410030HP:0410030Cleft lip0DYNC2I1 CL E G H5511221862ORPHA:93271Short rib-polydactyly syndrome, Verma-Naumoff type
HP:0410030HP:0410030Cleft lip0DYNC2I2 CL E G H8989128296ORPHA:93271Short rib-polydactyly syndrome, Verma-Naumoff type
HP:0410030HP:0410030Cleft lip0DYNC2LI1 CL E G H5162624595OMIM:617088Short-rib thoracic dysplasia 15 with polydactyly7
HP:0410030HP:0410030Cleft lip0EFNB1 CL E G H19473226OMIM:304110Craniofrontonasal syndrome27
HP:0410030HP:0410030Cleft lip0EIF2S3 CL E G H19683267OMIM:300148Mehmo syndrome.8
HP:0410030HP:0410030Cleft lip0EPG5 CL E G H5772429331OMIM:242840Vici syndrome40
HP:0410030HP:0410030Cleft lip0ESCO2 CL E G H15757027230OMIM:216100Cleft lip/palate with abnormal thumbs and microcephaly92
HP:0410030HP:0410030Cleft lip0ESCO2 CL E G H15757027230OMIM:268300Roberts syndrome92
HP:0410030HP:0410030Cleft lip0ESCO2 CL E G H15757027230ORPHA:3103Roberts syndrome92
HP:0410030HP:0410030Cleft lip0EVC CL E G H21213497OMIM:225500Ellis-Van creveld syndrome209
HP:0410030HP:0410030Cleft lip0EVC2 CL E G H13288419747OMIM:225500Ellis-Van creveld syndrome137
HP:0410030HP:0410030Cleft lip0FAM20C CL E G H5697522140ORPHA:1832Lethal osteosclerotic bone dysplasia35
HP:0410030HP:0410030Cleft lip0FBXO11 CL E G H8020413590OMIM:618089Intellectual developmental disorder with dysmorphic facies and behavioral abnormalities7
HP:0410030HP:0410030Cleft lip0FGD1 CL E G H22453663OMIM:305400Aarskog-Scott syndrome62
HP:0410030HP:0410030Cleft lip0FGD1 CL E G H22453663ORPHA:915Aarskog-Scott syndrome62
HP:0410030HP:0410030Cleft lip0FGF20 CL E G H262813677ORPHA:1848Renal agenesis, bilateral2
HP:0410030HP:0410030Cleft lip0FGF8 CL E G H22533686ORPHA:93925Alobar holoprosencephaly17
HP:0410030HP:0410030Cleft lip0FGF8 CL E G H22533686OMIM:612702Hypogonadotropic hypogonadism 6 with or without anosmia.17
HP:0410030HP:0410030Cleft lip0FGF8 CL E G H22533686ORPHA:93924Lobar holoprosencephaly17
HP:0410030HP:0410030Cleft lip0FGF8 CL E G H22533686ORPHA:93926Midline interhemispheric variant of holoprosencephaly17
HP:0410030HP:0410030Cleft lip0FGF8 CL E G H22533686ORPHA:220386Semilobar holoprosencephaly17
HP:0410030HP:0410030Cleft lip0FGFR1 CL E G H22603688ORPHA:2117Hartsfield syndrome172
HP:0410030HP:0410030Cleft lip0FGFR1 CL E G H22603688OMIM:615465Hartsfield syndrome172
HP:0410030HP:0410030Cleft lip0FGFR1 CL E G H22603688OMIM:147950Hypogonadotropic hypogonadism 2 with or without anosmia172
HP:0410030HP:0410030Cleft lip0FGFR1 CL E G H22603688ORPHA:93924Lobar holoprosencephaly172
HP:0410030HP:0410030Cleft lip0FGFR1 CL E G H22603688ORPHA:220386Semilobar holoprosencephaly172
HP:0410030HP:0410030Cleft lip0FGFRL1 CL E G H538343693OMIM:194190Wolf-Hirschhorn syndrome
HP:0410030HP:0410030Cleft lip0FKRP CL E G H7914717997OMIM:236670Muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A, 1157
HP:0410030HP:0410030Cleft lip0FKTN CL E G H22183622OMIM:236670Muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A, 1184
HP:0410030HP:0410030Cleft lip0FLII CL E G H23143750ORPHA:819Smith-Magenis syndrome
HP:0410030HP:0410030Cleft lip0FLNB CL E G H23173755OMIM:150250Larsen syndrome233
HP:0410030HP:0410030Cleft lip0FLRT3 CL E G H237673762OMIM:615271Hypogonadotropic hypogonadism 21 with or without anosmia4
HP:0410030HP:0410030Cleft lip0FOXA2 CL E G H31705022ORPHA:95494Combined pituitary hormone deficiencies, genetic forms
HP:0410030HP:0410030Cleft lip0FOXC2 CL E G H23033801ORPHA:33001Lymphedema-distichiasis syndrome20
HP:0410030HP:0410030Cleft lip0FOXC2 CL E G H23033801OMIM:153400Lymphedema-Distichiasis syndrome20
HP:0410030HP:0410030Cleft lip0FOXF1 CL E G H22943809OMIM:265380Alveolar capillary dysplasia with misalignment of pulmonary veins61
HP:0410030HP:0410030Cleft lip0FOXH1 CL E G H89283814ORPHA:93925Alobar holoprosencephaly48
HP:0410030HP:0410030Cleft lip0FOXH1 CL E G H89283814ORPHA:93924Lobar holoprosencephaly48
HP:0410030HP:0410030Cleft lip0FOXH1 CL E G H89283814ORPHA:93926Midline interhemispheric variant of holoprosencephaly48
HP:0410030HP:0410030Cleft lip0FOXH1 CL E G H89283814ORPHA:220386Semilobar holoprosencephaly48
HP:0410030HP:0410030Cleft lip0FRAS1 CL E G H8014419185OMIM:219000Fraser syndrome353
HP:0410030HP:0410030Cleft lip0FRAS1 CL E G H8014419185ORPHA:2052Fraser syndrome353
HP:0410030HP:0410030Cleft lip0FREM2 CL E G H34164025396ORPHA:2052Fraser syndrome263
HP:0410030HP:0410030Cleft lip0FZD2 CL E G H25354040ORPHA:3107Autosomal dominant Robinow syndrome
HP:0410030HP:0410030Cleft lip0GAS1 CL E G H26194165ORPHA:93925Alobar holoprosencephaly2
HP:0410030HP:0410030Cleft lip0GAS1 CL E G H26194165ORPHA:93924Lobar holoprosencephaly2
HP:0410030HP:0410030Cleft lip0GAS1 CL E G H26194165ORPHA:93926Midline interhemispheric variant of holoprosencephaly2
HP:0410030HP:0410030Cleft lip0GAS1 CL E G H26194165ORPHA:220386Semilobar holoprosencephaly2
HP:0410030HP:0410030Cleft lip0GATA1 CL E G H26234170ORPHA:124Blackfan-Diamond anemiaHP:0040283 - Occasional29
HP:0410030HP:0410030Cleft lip0GDF11 CL E G H102204216OMIM:619122VERTEBRAL HYPERSEGMENTATION AND OROFACIAL ANOMALIES; VHO
HP:0410030HP:0410030Cleft lip0GFRA1 CL E G H26744243ORPHA:1848Renal agenesis, bilateral1
HP:0410030HP:0410030Cleft lip0GJA1 CL E G H26974274ORPHA:2710Oculodentodigital dysplasia68
HP:0410030HP:0410030Cleft lip0GJA1 CL E G H26974274OMIM:164200Oculodentodigital dysplasia68
HP:0410030HP:0410030Cleft lip0GLI2 CL E G H27364318ORPHA:93925Alobar holoprosencephaly173
HP:0410030HP:0410030Cleft lip0GLI2 CL E G H27364318ORPHA:95494Combined pituitary hormone deficiencies, genetic forms173
HP:0410030HP:0410030Cleft lip0GLI2 CL E G H27364318OMIM:615849Culler-Jones syndrome173
HP:0410030HP:0410030Cleft lip0GLI2 CL E G H27364318OMIM:610829Holoprosencephaly 9173
HP:0410030HP:0410030Cleft lip0GLI2 CL E G H27364318ORPHA:93924Lobar holoprosencephaly173
HP:0410030HP:0410030Cleft lip0GLI2 CL E G H27364318ORPHA:93926Midline interhemispheric variant of holoprosencephaly173
HP:0410030HP:0410030Cleft lip0GLI2 CL E G H27364318ORPHA:220386Semilobar holoprosencephaly173
HP:0410030HP:0410030Cleft lip0GLI3 CL E G H27374319ORPHA:672Pallister-Hall syndromeHP:0040283 - Occasional270
HP:0410030HP:0410030Cleft lip0GLI3 CL E G H27374319OMIM:146510Pallister-Hall syndrome270
HP:0410030HP:0410030Cleft lip0GPC3 CL E G H27194451ORPHA:373Simpson-Golabi-Behmel syndrome73
HP:0410030HP:0410030Cleft lip0GPC3 CL E G H27194451OMIM:312870Simpson-golabi-behmel syndrome, type 173
HP:0410030HP:0410030Cleft lip0GPC4 CL E G H22394452ORPHA:373Simpson-Golabi-Behmel syndrome
HP:0410030HP:0410030Cleft lip0GPC4 CL E G H22394452OMIM:312870Simpson-golabi-behmel syndrome, type 1
HP:0410030HP:0410030Cleft lip0GREB1L CL E G H8000031042ORPHA:1848Renal agenesis, bilateral
HP:0410030HP:0410030Cleft lip0GRHL3 CL E G H5782225839ORPHA:99771Bifid uvulaHP:0040283 - Occasional12
HP:0410030HP:0410030Cleft lip0GRHL3 CL E G H5782225839ORPHA:888Van der Woude syndrome12
HP:0410030HP:0410030Cleft lip0GRHL3 CL E G H5782225839OMIM:606713Van der woude syndrome 212
HP:0410030HP:0410030Cleft lip0GRIP1 CL E G H2342618708ORPHA:2052Fraser syndrome80
HP:0410030HP:0410030Cleft lip0H4C3 CL E G H83644787OMIM:619758TESSADORI-VAN HAAFTEN NEURODEVELOPMENTAL SYNDROME 1; TEVANED1
HP:0410030HP:0410030Cleft lip0HESX1 CL E G H88204877ORPHA:95494Combined pituitary hormone deficiencies, genetic forms21
HP:0410030HP:0410030Cleft lip0HOXD13 CL E G H32395136ORPHA:887VACTERL/VATER association25
HP:0410030HP:0410030Cleft lip0HYLS1 CL E G H21984426558ORPHA:2189Hydrolethalus31
HP:0410030HP:0410030Cleft lip0HYLS1 CL E G H21984426558OMIM:236680Hydrolethalus syndrome 131
HP:0410030HP:0410030Cleft lip0IFT57 CL E G H5508117367OMIM:617927Orofaciodigital syndrome XVIII.
HP:0410030HP:0410030Cleft lip0IFT80 CL E G H5756029262ORPHA:93271Short rib-polydactyly syndrome, Verma-Naumoff type65
HP:0410030HP:0410030Cleft lip0INTS1 CL E G H2617324555OMIM:618571NEURODEVELOPMENTAL DISORDER WITH CATARACTS, POOR GROWTH, AND DYSMORPHIC FACIES; NDCAGF
HP:0410030HP:0410030Cleft lip0INTU CL E G H2715229239OMIM:617926OROFACIODIGITAL SYNDROME XVII; OFD17
HP:0410030HP:0410030Cleft lip0INTU CL E G H2715229239OMIM:617925Short-Rib thoracic dysplasia 20 with polydactyly
HP:0410030HP:0410030Cleft lip0IQSEC2 CL E G H2309629059ORPHA:819Smith-Magenis syndrome119
HP:0410030HP:0410030Cleft lip0IRF6 CL E G H36646121ORPHA:1300Autosomal dominant popliteal pterygium syndrome99
HP:0410030HP:0410030Cleft lip0IRF6 CL E G H36646121ORPHA:199302Isolated cleft lip99
HP:0410030HP:0410030Cleft lip0IRF6 CL E G H36646121OMIM:608864Orofacial cleft 6, susceptibility to99
HP:0410030HP:0410030Cleft lip0IRF6 CL E G H36646121OMIM:119500Popliteal pterygium syndrome99
HP:0410030HP:0410030Cleft lip0IRF6 CL E G H36646121ORPHA:888Van der Woude syndrome99
HP:0410030HP:0410030Cleft lip0IRF6 CL E G H36646121OMIM:119300van der Woude syndrome 199
HP:0410030HP:0410030Cleft lip0ITGA8 CL E G H85166144ORPHA:1848Renal agenesis, bilateral4
HP:0410030HP:0410030Cleft lip0JUP CL E G H37286207ORPHA:34217Naxos disease222
HP:0410030HP:0410030Cleft lip0KANSL1 CL E G H28405824565OMIM:610443Koolen-De Vries syndrome283
HP:0410030HP:0410030Cleft lip0KAT5 CL E G H105245275OMIM:619103NEURODEVELOPMENTAL DISORDER WITH DYSMORPHIC FACIES, SLEEP DISTURBANCE, AND BRAIN ABNORMALITIES; NEDFASB1
HP:0410030HP:0410030Cleft lip0KATNIP CL E G H2324729068OMIM:616784JOUBERT SYNDROME 26; JBTS26
HP:0410030HP:0410030Cleft lip0KIF7 CL E G H37465430497OMIM:200990Acrocallosal syndrome167
HP:0410030HP:0410030Cleft lip0KIF7 CL E G H37465430497ORPHA:2189Hydrolethalus167
HP:0410030HP:0410030Cleft lip0LARGE1 CL E G H92156511OMIM:236670Muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A, 1136
HP:0410030HP:0410030Cleft lip0LETM1 CL E G H39546556ORPHA:280Wolf-Hirschhorn syndrome2
HP:0410030HP:0410030Cleft lip0LETM1 CL E G H39546556OMIM:194190Wolf-Hirschhorn syndrome2
HP:0410030HP:0410030Cleft lip0LHX4 CL E G H8988421734ORPHA:95494Combined pituitary hormone deficiencies, genetic forms43
HP:0410030HP:0410030Cleft lip0LMX1B CL E G H40106654OMIM:161200Nail-Patella syndrome165
HP:0410030HP:0410030Cleft lip0MASP1 CL E G H56486901OMIM:2579203mc syndrome 121
HP:0410030HP:0410030Cleft lip0MED12 CL E G H996811957OMIM:301068HARDIKAR SYNDROME; HDKR228
HP:0410030HP:0410030Cleft lip0MED12 CL E G H996811957OMIM:305450Opitz-Kaveggia syndrome228
HP:0410030HP:0410030Cleft lip0MEIS2 CL E G H42127001OMIM:600987Cleft palate, cardiac defects, and mental retardation7
HP:0410030HP:0410030Cleft lip0MEOX1 CL E G H42227013OMIM:214300Klippel-Feil syndrome, autosomal recessive5
HP:0410030HP:0410030Cleft lip0MID1 CL E G H42817095ORPHA:2745Opitz GBBB syndromeHP:0040282 - Frequent57
HP:0410030HP:0410030Cleft lip0MID1 CL E G H42817095OMIM:300000Opitz gbbb syndrome, type I57
HP:0410030HP:0410030Cleft lip0MSX1 CL E G H44877391ORPHA:199302Isolated cleft lip12
HP:0410030HP:0410030Cleft lip0MSX1 CL E G H44877391OMIM:608874OROFACIAL CLEFT 5; OFC512
HP:0410030HP:0410030Cleft lip0MSX2 CL E G H44887392ORPHA:60015Enlarged parietal foraminaHP:0040284 - Very rare45
HP:0410030HP:0410030Cleft lip0MSX2 CL E G H44887392OMIM:168500Parietal foramina45
HP:0410030HP:0410030Cleft lip0MTHFR CL E G H45247436ORPHA:563609Isolated anencephalyHP:0040283 - Occasional183
HP:0410030HP:0410030Cleft lip0MYL11 CL E G H2989529824OMIM:619110ARTHROGRYPOSIS, DISTAL, TYPE 1C; DA1C
HP:0410030HP:0410030Cleft lip0NAA10 CL E G H826018704OMIM:309800Microphthalmia, syndromic 123
HP:0410030HP:0410030Cleft lip0NBN CL E G H46837652ORPHA:647Nijmegen breakage syndrome706
HP:0410030HP:0410030Cleft lip0NBN CL E G H46837652OMIM:251260Nijmegen breakage syndrome706
HP:0410030HP:0410030Cleft lip0NECTIN1 CL E G H58189706OMIM:225060Cleft lip/palate-ectodermal dysplasia syndrome4
HP:0410030HP:0410030Cleft lip0NECTIN1 CL E G H58189706ORPHA:3253Cleft lip/palate-ectodermal dysplasia syndrome4
HP:0410030HP:0410030Cleft lip0NECTIN1 CL E G H58189706ORPHA:199302Isolated cleft lip4
HP:0410030HP:0410030Cleft lip0NEK1 CL E G H47507744ORPHA:2751Orofaciodigital syndrome type 2101
HP:0410030HP:0410030Cleft lip0NEK1 CL E G H47507744OMIM:263520Short-Rib thoracic dysplasia 6 with or without polydactyly101
HP:0410030HP:0410030Cleft lip0NELFA CL E G H746912768ORPHA:280Wolf-Hirschhorn syndrome
HP:0410030HP:0410030Cleft lip0NIPBL CL E G H2583628862OMIM:122470Cornelia de Lange syndrome 1494
HP:0410030HP:0410030Cleft lip0NODAL CL E G H48387865ORPHA:93925Alobar holoprosencephaly45
HP:0410030HP:0410030Cleft lip0NODAL CL E G H48387865ORPHA:93924Lobar holoprosencephaly45
HP:0410030HP:0410030Cleft lip0NODAL CL E G H48387865ORPHA:93926Midline interhemispheric variant of holoprosencephaly45
HP:0410030HP:0410030Cleft lip0NODAL CL E G H48387865ORPHA:220386Semilobar holoprosencephaly45
HP:0410030HP:0410030Cleft lip0NSD2 CL E G H746812766OMIM:194190Wolf-Hirschhorn syndrome118
HP:0410030HP:0410030Cleft lip0NSD2 CL E G H746812766ORPHA:280Wolf-Hirschhorn syndrome118
HP:0410030HP:0410030Cleft lip0NSDHL CL E G H5081413398OMIM:308050Congenital hemidysplasia with ichthyosiform erythroderma and limb defects34
HP:0410030HP:0410030Cleft lip0NSMF CL E G H2601229843OMIM:614838Hypogonadotropic hypogonadism 9 with or without anosmia.6
HP:0410030HP:0410030Cleft lip0NUAK2 CL E G H8178829558OMIM:619452ANENCEPHALY 2; ANPH2
HP:0410030HP:0410030Cleft lip0NUP107 CL E G H5712229914OMIM:618348Galloway-Mowat syndrome 7.5
HP:0410030HP:0410030Cleft lip0NUP107 CL E G H5712229914OMIM:616730Nephrotic syndrome, type 11.5
HP:0410030HP:0410030Cleft lip0OCLN CL E G H1005066588104OMIM:251290Band-Like calcification with simplified gyration and polymicrogyria23
HP:0410030HP:0410030Cleft lip0OFD1 CL E G H84812567OMIM:311200Orofaciodigital syndrome I201
HP:0410030HP:0410030Cleft lip0OFD1 CL E G H84812567ORPHA:2750Orofaciodigital syndrome type 1201
HP:0410030HP:0410030Cleft lip0OTX2 CL E G H50158522ORPHA:95494Combined pituitary hormone deficiencies, genetic forms41
HP:0410030HP:0410030Cleft lip0PAX3 CL E G H50778617ORPHA:894Waardenburg syndrome type 159
HP:0410030HP:0410030Cleft lip0PHF8 CL E G H2313320672OMIM:300263Siderius X-linked mental retardation syndrome23
HP:0410030HP:0410030Cleft lip0PHF8 CL E G H2313320672ORPHA:85287X-linked intellectual disability, Siderius type23
HP:0410030HP:0410030Cleft lip0PHGDH CL E G H262278923OMIM:256520Neu-Laxova syndrome37
HP:0410030HP:0410030Cleft lip0PIGG CL E G H5487225985ORPHA:280Wolf-Hirschhorn syndrome7
HP:0410030HP:0410030Cleft lip0PIGN CL E G H235568967ORPHA:2059Fryns syndrome37
HP:0410030HP:0410030Cleft lip0PIGV CL E G H5565026031OMIM:239300Hyperphosphatasia with mental retardation57
HP:0410030HP:0410030Cleft lip0PLCH1 CL E G H2300729185OMIM:619895
HP:0410030HP:0410030Cleft lip0PLCH1 CL E G H2300729185ORPHA:93925Alobar holoprosencephaly
HP:0410030HP:0410030Cleft lip0POLR1B CL E G H8417220454ORPHA:861Treacher-Collins syndrome
HP:0410030HP:0410030Cleft lip0POLR1C CL E G H953320194ORPHA:861Treacher-Collins syndrome38
HP:0410030HP:0410030Cleft lip0POLR1D CL E G H5108220422ORPHA:861Treacher-Collins syndrome31
HP:0410030HP:0410030Cleft lip0POMT1 CL E G H105859202OMIM:236670Muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A, 1213
HP:0410030HP:0410030Cleft lip0POMT2 CL E G H2995419743OMIM:236670Muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A, 1221
HP:0410030HP:0410030Cleft lip0POMT2 CL E G H2995419743OMIM:613150Muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A, 2221
HP:0410030HP:0410030Cleft lip0PORCN CL E G H6484017652OMIM:305600Focal dermal hypoplasia20
HP:0410030HP:0410030Cleft lip0POU1F1 CL E G H54499210ORPHA:95494Combined pituitary hormone deficiencies, genetic forms36
HP:0410030HP:0410030Cleft lip0PROKR2 CL E G H12867415836OMIM:244200Hypogonadotropic hypogonadism 3 with or without anosmia34
HP:0410030HP:0410030Cleft lip0PROP1 CL E G H56269455ORPHA:95494Combined pituitary hormone deficiencies, genetic forms54
HP:0410030HP:0410030Cleft lip0PTCH1 CL E G H57279585ORPHA:93925Alobar holoprosencephaly665
HP:0410030HP:0410030Cleft lip0PTCH1 CL E G H57279585OMIM:109400Basal cell nevus syndrome665
HP:0410030HP:0410030Cleft lip0PTCH1 CL E G H57279585OMIM:610828Holoprosencephaly 7665
HP:0410030HP:0410030Cleft lip0PTCH1 CL E G H57279585ORPHA:93924Lobar holoprosencephaly665
HP:0410030HP:0410030Cleft lip0PTCH1 CL E G H57279585ORPHA:93926Midline interhemispheric variant of holoprosencephaly665
HP:0410030HP:0410030Cleft lip0PTCH1 CL E G H57279585ORPHA:220386Semilobar holoprosencephaly665
HP:0410030HP:0410030Cleft lip0PTCH2 CL E G H86439586OMIM:109400Basal cell nevus syndrome40
HP:0410030HP:0410030Cleft lip0RAB5IF CL E G H5596915870OMIM:616994
HP:0410030HP:0410030Cleft lip0RAI1 CL E G H107439834ORPHA:819Smith-Magenis syndrome150
HP:0410030HP:0410030Cleft lip0RERE CL E G H4739965OMIM:616975Neurodevelopmental disorder with or without anomalies of the brain, eye, or heart16
HP:0410030HP:0410030Cleft lip0RET CL E G H59799967ORPHA:1848Renal agenesis, bilateral572
HP:0410030HP:0410030Cleft lip0RIC1 CL E G H5758917686OMIM:618761CATIFA SYNDROME; CATIFA
HP:0410030HP:0410030Cleft lip0RIPK4 CL E G H54101496ORPHA:1234Bartsocas-Papas syndrome69
HP:0410030HP:0410030Cleft lip0RIPK4 CL E G H54101496OMIM:263650Popliteal pterygium syndrome, Bartsocas-Papas type 169
HP:0410030HP:0410030Cleft lip0RPGRIP1L CL E G H2332229168OMIM:611561Meckel syndrome, type 5167
HP:0410030HP:0410030Cleft lip0RPL11 CL E G H613510301ORPHA:124Blackfan-Diamond anemiaHP:0040283 - Occasional22
HP:0410030HP:0410030Cleft lip0RPL15 CL E G H613810306ORPHA:124Blackfan-Diamond anemiaHP:0040283 - Occasional3
HP:0410030HP:0410030Cleft lip0RPL18 CL E G H614110310ORPHA:124Blackfan-Diamond anemiaHP:0040283 - Occasional
HP:0410030HP:0410030Cleft lip0RPL26 CL E G H615410327ORPHA:124Blackfan-Diamond anemiaHP:0040283 - Occasional3
HP:0410030HP:0410030Cleft lip0RPL27 CL E G H615510328ORPHA:124Blackfan-Diamond anemiaHP:0040283 - Occasional1
HP:0410030HP:0410030Cleft lip0RPL31 CL E G H616010334ORPHA:124Blackfan-Diamond anemiaHP:0040283 - Occasional
HP:0410030HP:0410030Cleft lip0RPL35 CL E G H1122410344ORPHA:124Blackfan-Diamond anemiaHP:0040283 - Occasional
HP:0410030HP:0410030Cleft lip0RPL35A CL E G H616510345ORPHA:124Blackfan-Diamond anemiaHP:0040283 - Occasional11
HP:0410030HP:0410030Cleft lip0RPL5 CL E G H612510360ORPHA:124Blackfan-Diamond anemiaHP:0040283 - Occasional40
HP:0410030HP:0410030Cleft lip0RPL5 CL E G H612510360OMIM:612561Diamond-Blackfan anemia 640
HP:0410030HP:0410030Cleft lip0RPS10 CL E G H620410383ORPHA:124Blackfan-Diamond anemiaHP:0040283 - Occasional26
HP:0410030HP:0410030Cleft lip0RPS15A CL E G H621010389ORPHA:124Blackfan-Diamond anemiaHP:0040283 - Occasional
HP:0410030HP:0410030Cleft lip0RPS17 CL E G H621810397ORPHA:124Blackfan-Diamond anemiaHP:0040283 - Occasional5
HP:0410030HP:0410030Cleft lip0RPS19 CL E G H622310402ORPHA:124Blackfan-Diamond anemiaHP:0040283 - Occasional42
HP:0410030HP:0410030Cleft lip0RPS19 CL E G H622310402OMIM:105650Diamond-Blackfan anemia 142
HP:0410030HP:0410030Cleft lip0RPS20 CL E G H622410405ORPHA:124Blackfan-Diamond anemiaHP:0040283 - Occasional1
HP:0410030HP:0410030Cleft lip0RPS24 CL E G H622910411ORPHA:124Blackfan-Diamond anemiaHP:0040283 - Occasional22
HP:0410030HP:0410030Cleft lip0RPS26 CL E G H623110414ORPHA:124Blackfan-Diamond anemiaHP:0040283 - Occasional20
HP:0410030HP:0410030Cleft lip0RPS27 CL E G H623210416ORPHA:124Blackfan-Diamond anemiaHP:0040283 - Occasional1
HP:0410030HP:0410030Cleft lip0RPS28 CL E G H623410418ORPHA:124Blackfan-Diamond anemiaHP:0040283 - Occasional1
HP:0410030HP:0410030Cleft lip0RPS29 CL E G H623510419ORPHA:124Blackfan-Diamond anemiaHP:0040283 - Occasional3
HP:0410030HP:0410030Cleft lip0RPS7 CL E G H620110440ORPHA:124Blackfan-Diamond anemiaHP:0040283 - Occasional20
HP:0410030HP:0410030Cleft lip0RSPO2 CL E G H34041928583OMIM:618021Tetraamelia syndrome 2
HP:0410030HP:0410030Cleft lip0SEMA3E CL E G H972310727ORPHA:138CHARGE syndrome16
HP:0410030HP:0410030Cleft lip0SF3B2 CL E G H1099210769OMIM:164210Hemifacial microsomia2
HP:0410030HP:0410030Cleft lip0SF3B4 CL E G H1026210771OMIM:154400Acrofacial dysostosis 1, Nager type49
HP:0410030HP:0410030Cleft lip0SF3B4 CL E G H1026210771ORPHA:245Nager syndrome49
HP:0410030HP:0410030Cleft lip0SHH CL E G H646910848ORPHA:93925Alobar holoprosencephaly67
HP:0410030HP:0410030Cleft lip0SHH CL E G H646910848OMIM:142945Holoprosencephaly 3.67
HP:0410030HP:0410030Cleft lip0SHH CL E G H646910848ORPHA:93924Lobar holoprosencephaly67
HP:0410030HP:0410030Cleft lip0SHH CL E G H646910848ORPHA:93926Midline interhemispheric variant of holoprosencephaly67
HP:0410030HP:0410030Cleft lip0SHH CL E G H646910848ORPHA:220386Semilobar holoprosencephaly67
HP:0410030HP:0410030Cleft lip0SHH CL E G H646910848OMIM:147250Solitary median maxillary central incisor67
HP:0410030HP:0410030Cleft lip0SIX3 CL E G H649610889ORPHA:93925Alobar holoprosencephaly32
HP:0410030HP:0410030Cleft lip0SIX3 CL E G H649610889OMIM:157170Holoprosencephaly 232
HP:0410030HP:0410030Cleft lip0SIX3 CL E G H649610889ORPHA:93924Lobar holoprosencephaly32
HP:0410030HP:0410030Cleft lip0SIX3 CL E G H649610889ORPHA:93926Midline interhemispheric variant of holoprosencephaly32
HP:0410030HP:0410030Cleft lip0SIX3 CL E G H649610889ORPHA:220386Semilobar holoprosencephaly32
HP:0410030HP:0410030Cleft lip0SLC29A3 CL E G H5531523096ORPHA:168569H syndrome68
HP:0410030HP:0410030Cleft lip0SLC2A10 CL E G H8103113444ORPHA:3342Arterial tortuosity syndrome178
HP:0410030HP:0410030Cleft lip0SMAD4 CL E G H40896770OMIM:139210Myhre syndrome504
HP:0410030HP:0410030Cleft lip0SMAD4 CL E G H40896770ORPHA:2588Myhre syndrome504
HP:0410030HP:0410030Cleft lip0SMC1A CL E G H824311111ORPHA:220386Semilobar holoprosencephaly135
HP:0410030HP:0410030Cleft lip0SMCHD1 CL E G H2334729090OMIM:603457Bosma arhinia microphthalmia syndrome174
HP:0410030HP:0410030Cleft lip0SMG9 CL E G H5600625763OMIM:616920Heart and brain malformation syndrome.2
HP:0410030HP:0410030Cleft lip0SMO CL E G H660811119OMIM:241800Hypothalamic hamartomascongenital hypothalamic hamartoma syndrome, included22
HP:0410030HP:0410030Cleft lip0SMOC1 CL E G H6409320318ORPHA:1106Microphthalmia with limb anomalies15
HP:0410030HP:0410030Cleft lip0SMOC1 CL E G H6409320318OMIM:206920Microphthalmia with limb anomalies15
HP:0410030HP:0410030Cleft lip0SMPD4 CL E G H5562732949OMIM:618622NEURODEVELOPMENTAL DISORDER WITH MICROCEPHALY, ARTHROGRYPOSIS, AND STRUCTURAL BRAIN ANOMALIES; NEDMABA1
HP:0410030HP:0410030Cleft lip0SPECC1L CL E G H2338429022OMIM:600251Facial clefting, oblique, 16
HP:0410030HP:0410030Cleft lip0SPOP CL E G H840511254OMIM:618829NABAIS SA-DE VRIES SYNDROME, TYPE 2; NSDVS216
HP:0410030HP:0410030Cleft lip0STAG2 CL E G H1073511355ORPHA:93925Alobar holoprosencephaly1
HP:0410030HP:0410030Cleft lip0STAG2 CL E G H1073511355OMIM:301043HOLOPROSENCEPHALY 13, X-LINKED; HPE131
HP:0410030HP:0410030Cleft lip0STAG2 CL E G H1073511355OMIM:301022Neurodevelopmental disorder, X-linked, with craniofacial abnormalities.1
HP:0410030HP:0410030Cleft lip0STAG2 CL E G H1073511355ORPHA:220386Semilobar holoprosencephaly1
HP:0410030HP:0410030Cleft lip0STIL CL E G H649110879ORPHA:93925Alobar holoprosencephaly99
HP:0410030HP:0410030Cleft lip0STIL CL E G H649110879ORPHA:93924Lobar holoprosencephaly99
HP:0410030HP:0410030Cleft lip0STIL CL E G H649110879ORPHA:93926Midline interhemispheric variant of holoprosencephaly99
HP:0410030HP:0410030Cleft lip0STIL CL E G H649110879ORPHA:220386Semilobar holoprosencephaly99
HP:0410030HP:0410030Cleft lip0SUFU CL E G H5168416466OMIM:109400Basal cell nevus syndrome124
HP:0410030HP:0410030Cleft lip0SUMO1 CL E G H734112502OMIM:613705Orofacial cleft 108
HP:0410030HP:0410030Cleft lip0TAPT1 CL E G H20201826887OMIM:616897Osteochondrodysplasia, complex lethal, Symoens-Barnes-Gistelinck type2
HP:0410030HP:0410030Cleft lip0TBX2 CL E G H690911597OMIM:618223VERTEBRAL ANOMALIES AND VARIABLE ENDOCRINE AND T-CELL DYSFUNCTION.
HP:0410030HP:0410030Cleft lip0TCOF1 CL E G H694911654ORPHA:861Treacher-Collins syndrome140
HP:0410030HP:0410030Cleft lip0TCTN2 CL E G H7986725774OMIM:613885Meckel syndrome, type 876
HP:0410030HP:0410030Cleft lip0TCTN3 CL E G H2612324519ORPHA:2753Orofaciodigital syndrome type 431
HP:0410030HP:0410030Cleft lip0TDGF1 CL E G H699711701ORPHA:93925Alobar holoprosencephaly1
HP:0410030HP:0410030Cleft lip0TDGF1 CL E G H699711701ORPHA:93924Lobar holoprosencephaly1
HP:0410030HP:0410030Cleft lip0TDGF1 CL E G H699711701ORPHA:93926Midline interhemispheric variant of holoprosencephaly1
HP:0410030HP:0410030Cleft lip0TDGF1 CL E G H699711701ORPHA:220386Semilobar holoprosencephaly1
HP:0410030HP:0410030Cleft lip0TFAP2A CL E G H702011742ORPHA:1297Branchio-oculo-facial syndrome12
HP:0410030HP:0410030Cleft lip0TFAP2A CL E G H702011742OMIM:113620Branchiooculofacial syndrome12
HP:0410030HP:0410030Cleft lip0TFE3 CL E G H703011752OMIM:301066INTELLECTUAL DEVELOPMENTAL DISORDER, X-LINKED, SYNDROMIC, WITH PIGMENTARY MOSAICISM AND COARSE FACIES; MRXSPF
HP:0410030HP:0410030Cleft lip0TGDS CL E G H2348320324OMIM:616145Catel-Manzke syndrome6
HP:0410030HP:0410030Cleft lip0TGIF1 CL E G H705011776ORPHA:93925Alobar holoprosencephaly32
HP:0410030HP:0410030Cleft lip0TGIF1 CL E G H705011776OMIM:142946Holoprosencephaly 432
HP:0410030HP:0410030Cleft lip0TGIF1 CL E G H705011776ORPHA:93924Lobar holoprosencephaly32
HP:0410030HP:0410030Cleft lip0TGIF1 CL E G H705011776ORPHA:93926Midline interhemispheric variant of holoprosencephaly32
HP:0410030HP:0410030Cleft lip0TGIF1 CL E G H705011776ORPHA:220386Semilobar holoprosencephaly32
HP:0410030HP:0410030Cleft lip0TMCO1 CL E G H5449918188ORPHA:1394Cerebrofaciothoracic dysplasia6
HP:0410030HP:0410030Cleft lip0TMCO1 CL E G H5449918188OMIM:213980Craniofacial dysmorphism, skeletal anomalies, and mental retardation syndrome6
HP:0410030HP:0410030Cleft lip0TP63 CL E G H862615979ORPHA:1072Ankyloblepharon filiforme adnatum-cleft palate syndrome140
HP:0410030HP:0410030Cleft lip0TP63 CL E G H862615979OMIM:106260Ankyloblepharon-Ectodermal defects-cleft lip/palate140
HP:0410030HP:0410030Cleft lip0TP63 CL E G H862615979ORPHA:199302Isolated cleft lip140
HP:0410030HP:0410030Cleft lip0TP63 CL E G H862615979ORPHA:69085Limb-mammary syndromeHP:0040283 - Occasional140
HP:0410030HP:0410030Cleft lip0TP63 CL E G H862615979OMIM:129400Rapp-Hodgkin syndrome140
HP:0410030HP:0410030Cleft lip0TRAPPC9 CL E G H8369630832OMIM:613192Mental retardation, autosomal recessive 13158
HP:0410030HP:0410030Cleft lip0TRRAP CL E G H829512347OMIM:618454Developmental delay with or without dysmorphic facies and autism.2
HP:0410030HP:0410030Cleft lip0TSR2 CL E G H9012125455ORPHA:124Blackfan-Diamond anemiaHP:0040283 - Occasional1
HP:0410030HP:0410030Cleft lip0TXNL4A CL E G H1090730551OMIM:608572Burn-Mckeown syndrome19
HP:0410030HP:0410030Cleft lip0UBB CL E G H731412463ORPHA:99771Bifid uvulaHP:0040283 - Occasional
HP:0410030HP:0410030Cleft lip0VANGL2 CL E G H5721615511ORPHA:563609Isolated anencephalyHP:0040283 - Occasional2
HP:0410030HP:0410030Cleft lip0VAX1 CL E G H1102312660OMIM:614402Microphthalmia, syndromic 115
HP:0410030HP:0410030Cleft lip0WDR35 CL E G H5753929250ORPHA:93271Short rib-polydactyly syndrome, Verma-Naumoff type136
HP:0410030HP:0410030Cleft lip0WLS CL E G H7997130238OMIM:619648ZAKI SYNDROME; ZKS
HP:0410030HP:0410030Cleft lip0WNT3 CL E G H747312782OMIM:273395Tetraamelia, autosomal recessive12
HP:0410030HP:0410030Cleft lip0WNT4 CL E G H5436112783OMIM:61181246,xx sex reversal with dysgenesis of kidneys, adrenals, and lungs.4
HP:0410030HP:0410030Cleft lip0WNT5A CL E G H747412784ORPHA:3107Autosomal dominant Robinow syndrome98
HP:0410030HP:0410030Cleft lip0WNT9B CL E G H748412779ORPHA:1848Renal agenesis, bilateral
HP:0410030HP:0410030Cleft lip0YAP1 CL E G H1041316262OMIM:120433Coloboma, ocular, with or without hearing impairment, cleft lip/palate, and/or mental retardation2
HP:0410030HP:0410030Cleft lip0YAP1 CL E G H1041316262ORPHA:1473Uveal coloboma-cleft lip and palate-intellectual disability2
HP:0410030HP:0410030Cleft lip0ZIC2 CL E G H754612873ORPHA:93925Alobar holoprosencephaly34
HP:0410030HP:0410030Cleft lip0ZIC2 CL E G H754612873ORPHA:93924Lobar holoprosencephaly34
HP:0410030HP:0410030Cleft lip0ZIC2 CL E G H754612873ORPHA:93926Midline interhemispheric variant of holoprosencephaly34
HP:0410030HP:0410030Cleft lip0ZIC2 CL E G H754612873ORPHA:220386Semilobar holoprosencephaly34
HP:0410030HP:0410030Cleft lip0ZSWIM6 CL E G H5768829316OMIM:603671Acromelic frontonasal dysostosis5
HP:0410030HP:0410030Cleft lip0ZSWIM6 CL E G H5768829316ORPHA:1827Acromelic frontonasal dysplasia5
HP:0410030HP:0010281Cleft lower lip1 CL E G H
HP:0410030HP:0000204Cleft upper lip1ACTB CL E G H60132OMIM:243310Baraitser-Winter syndrome 1HP:0040283 - Occasional72
HP:0410030HP:0000204Cleft upper lip1ACTB CL E G H60132OMIM:607371Dystonia, juvenile-onset.72
HP:0410030HP:0000204Cleft upper lip1ALX3 CL E G H257449OMIM:136760Frontonasal dysplasia 19
HP:0410030HP:0000204Cleft upper lip1AMER1 CL E G H13928526837OMIM:300373Osteopathia striata with cranial sclerosis.34
HP:0410030HP:0000204Cleft upper lip1ARHGAP31 CL E G H5751429216OMIM:100300Adams-Oliver syndrome 1.147
HP:0410030HP:0000204Cleft upper lip1ASXL1 CL E G H17102318318OMIM:605039Bohring-Opitz syndrome.145
HP:0410030HP:0000204Cleft upper lip1B3GALT6 CL E G H12679217978ORPHA:2725Eye defects-arachnodactyly-cardiopathy syndrome38
HP:0410030HP:0000204Cleft upper lip1B3GLCT CL E G H14517320207ORPHA:709Peters plus syndromeHP:0040282 - Frequent36
HP:0410030HP:0000204Cleft upper lip1B3GLCT CL E G H14517320207OMIM:261540Peters-Plus syndrome.36
HP:0410030HP:0000204Cleft upper lip1BCOR CL E G H5488020893OMIM:309800Microphthalmia, syndromic 1.101
HP:0410030HP:0000204Cleft upper lip1CC2D2A CL E G H5754529253OMIM:612284Meckel syndrome, type 6HP:0040283 - OccasionalHP:0003577 - Congenital onset247
HP:0410030HP:0000204Cleft upper lip1CDH1 CL E G H9991748ORPHA:1997Blepharo-cheilo-odontic syndrome1003
HP:0410030HP:0000204Cleft upper lip1CDH1 CL E G H9991748OMIM:119580Blepharocheilodontic syndrome 1.1003
HP:0410030HP:0000204Cleft upper lip1CDH1 CL E G H9991748OMIM:137215Gastric cancer, hereditary diffuseHP:0040283 - Occasional1003
HP:0410030HP:0000204Cleft upper lip1CDON CL E G H5093717104ORPHA:93925Alobar holoprosencephaly200
HP:0410030HP:0000204Cleft upper lip1CDON CL E G H5093717104ORPHA:93924Lobar holoprosencephaly200
HP:0410030HP:0000204Cleft upper lip1CDON CL E G H5093717104ORPHA:93926Midline interhemispheric variant of holoprosencephaly200
HP:0410030HP:0000204Cleft upper lip1CDON CL E G H5093717104ORPHA:220386Semilobar holoprosencephaly200
HP:0410030HP:0000204Cleft upper lip1CHD7 CL E G H5563620626ORPHA:138CHARGE syndromeHP:0040282 - Frequent515
HP:0410030HP:0000204Cleft upper lip1CHD7 CL E G H5563620626OMIM:214800Charge syndrome.515
HP:0410030HP:0000204Cleft upper lip1CHUK CL E G H11471974OMIM:619339BARTSOCAS-PAPAS SYNDROME 2; BPS23
HP:0410030HP:0000204Cleft upper lip1CILK1 CL E G H2285821219OMIM:612651ENDOCRINE-CEREBROOSTEODYSPLASIA.
HP:0410030HP:0000204Cleft upper lip1COLEC10 CL E G H105842220OMIM:2483403MC syndrome 33
HP:0410030HP:0000204Cleft upper lip1COLEC11 CL E G H7898917213OMIM:2650503mc syndrome 2.9
HP:0410030HP:0000204Cleft upper lip1CPLANE1 CL E G H6525025801OMIM:277170Orofaciodigital syndrome VI.
HP:0410030HP:0000204Cleft upper lip1CPLX1 CL E G H108152309OMIM:194190Wolf-Hirschhorn syndrome.1
HP:0410030HP:0000204Cleft upper lip1CPLX1 CL E G H108152309ORPHA:280Wolf-Hirschhorn syndromeHP:0040282 - Frequent1
HP:0410030HP:0000204Cleft upper lip1CTBP1 CL E G H14872494OMIM:194190Wolf-Hirschhorn syndrome.2
HP:0410030HP:0000204Cleft upper lip1CTBP1 CL E G H14872494ORPHA:280Wolf-Hirschhorn syndromeHP:0040282 - Frequent2
HP:0410030HP:0000204Cleft upper lip1CTNND1 CL E G H15002515ORPHA:1997Blepharo-cheilo-odontic syndrome
HP:0410030HP:0000204Cleft upper lip1CYP26C1 CL E G H34066520577ORPHA:398189Focal facial dermal dysplasia type IVHP:0040282 - Frequent2
HP:0410030HP:0000204Cleft upper lip1DDX3X CL E G H16542745OMIM:300958MENTAL RETARDATION, X-LINKED 102; MRX10257
HP:0410030HP:0000204Cleft upper lip1DDX59 CL E G H8347925360ORPHA:2919Orofaciodigital syndrome type 52
HP:0410030HP:0000204Cleft upper lip1DDX59 CL E G H8347925360OMIM:174300Orofaciodigital syndrome V2
HP:0410030HP:0000204Cleft upper lip1DEAF1 CL E G H1052214677ORPHA:819Smith-Magenis syndromeHP:0040283 - Occasional33
HP:0410030HP:0000204Cleft upper lip1DHODH CL E G H17232867ORPHA:246Postaxial acrofacial dysostosis59
HP:0410030HP:0000204Cleft upper lip1DHODH CL E G H17232867OMIM:263750Postaxial acrofacial dysostosis.59
HP:0410030HP:0000204Cleft upper lip1DISP1 CL E G H8497619711ORPHA:93925Alobar holoprosencephaly22
HP:0410030HP:0000204Cleft upper lip1DISP1 CL E G H8497619711ORPHA:93924Lobar holoprosencephaly22
HP:0410030HP:0000204Cleft upper lip1DISP1 CL E G H8497619711ORPHA:93926Midline interhemispheric variant of holoprosencephaly22
HP:0410030HP:0000204Cleft upper lip1DISP1 CL E G H8497619711ORPHA:220386Semilobar holoprosencephaly22
HP:0410030HP:0000204Cleft upper lip1DLL1 CL E G H285142908ORPHA:93925Alobar holoprosencephaly3
HP:0410030HP:0000204Cleft upper lip1DLL1 CL E G H285142908ORPHA:93924Lobar holoprosencephaly3
HP:0410030HP:0000204Cleft upper lip1DLL1 CL E G H285142908ORPHA:93926Midline interhemispheric variant of holoprosencephaly3
HP:0410030HP:0000204Cleft upper lip1DLL1 CL E G H285142908ORPHA:220386Semilobar holoprosencephaly3
HP:0410030HP:0000204Cleft upper lip1DLX4 CL E G H17482917OMIM:616788Orofacial cleft 151
HP:0410030HP:0000204Cleft upper lip1DVL1 CL E G H18553084ORPHA:3107Autosomal dominant Robinow syndrome14
HP:0410030HP:0000204Cleft upper lip1DVL3 CL E G H18573087ORPHA:3107Autosomal dominant Robinow syndrome5
HP:0410030HP:0000204Cleft upper lip1DYNC2H1 CL E G H796592962OMIM:613091Asphyxiating thoracic dystrophy 3HP:0040283 - Occasional304
HP:0410030HP:0000204Cleft upper lip1DYNC2H1 CL E G H796592962ORPHA:93271Short rib-polydactyly syndrome, Verma-Naumoff typeHP:0040282 - Frequent304
HP:0410030HP:0000204Cleft upper lip1DYNC2I1 CL E G H5511221862ORPHA:93271Short rib-polydactyly syndrome, Verma-Naumoff typeHP:0040282 - Frequent
HP:0410030HP:0000204Cleft upper lip1DYNC2I2 CL E G H8989128296ORPHA:93271Short rib-polydactyly syndrome, Verma-Naumoff typeHP:0040282 - Frequent
HP:0410030HP:0000204Cleft upper lip1DYNC2LI1 CL E G H5162624595OMIM:617088Short-rib thoracic dysplasia 15 with polydactyly7
HP:0410030HP:0000204Cleft upper lip1EFNB1 CL E G H19473226OMIM:304110Craniofrontonasal syndrome.27
HP:0410030HP:0000204Cleft upper lip1EPG5 CL E G H5772429331OMIM:242840Vici syndrome.40
HP:0410030HP:0000204Cleft upper lip1ESCO2 CL E G H15757027230OMIM:216100Cleft lip/palate with abnormal thumbs and microcephaly.92
HP:0410030HP:0000204Cleft upper lip1ESCO2 CL E G H15757027230OMIM:268300Roberts syndrome.92
HP:0410030HP:0000204Cleft upper lip1ESCO2 CL E G H15757027230ORPHA:3103Roberts syndromeHP:0040282 - Frequent92
HP:0410030HP:0000204Cleft upper lip1EVC CL E G H21213497OMIM:225500Ellis-Van creveld syndrome.209
HP:0410030HP:0000204Cleft upper lip1EVC2 CL E G H13288419747OMIM:225500Ellis-Van creveld syndrome.137
HP:0410030HP:0000204Cleft upper lip1FAM20C CL E G H5697522140ORPHA:1832Lethal osteosclerotic bone dysplasia35
HP:0410030HP:0000204Cleft upper lip1FGD1 CL E G H22453663OMIM:305400Aarskog-Scott syndrome.62
HP:0410030HP:0000204Cleft upper lip1FGD1 CL E G H22453663ORPHA:915Aarskog-Scott syndromeHP:0040283 - Occasional62
HP:0410030HP:0000204Cleft upper lip1FGF20 CL E G H262813677ORPHA:1848Renal agenesis, bilateral2
HP:0410030HP:0000204Cleft upper lip1FGF8 CL E G H22533686ORPHA:93925Alobar holoprosencephaly17
HP:0410030HP:0000204Cleft upper lip1FGF8 CL E G H22533686ORPHA:93924Lobar holoprosencephaly17
HP:0410030HP:0000204Cleft upper lip1FGF8 CL E G H22533686ORPHA:93926Midline interhemispheric variant of holoprosencephaly17
HP:0410030HP:0000204Cleft upper lip1FGF8 CL E G H22533686ORPHA:220386Semilobar holoprosencephaly17
HP:0410030HP:0000204Cleft upper lip1FGFR1 CL E G H22603688OMIM:615465Hartsfield syndrome.172
HP:0410030HP:0000204Cleft upper lip1FGFR1 CL E G H22603688ORPHA:2117Hartsfield syndrome172
HP:0410030HP:0000204Cleft upper lip1FGFR1 CL E G H22603688OMIM:147950Hypogonadotropic hypogonadism 2 with or without anosmia.172
HP:0410030HP:0000204Cleft upper lip1FGFR1 CL E G H22603688ORPHA:93924Lobar holoprosencephaly172
HP:0410030HP:0000204Cleft upper lip1FGFR1 CL E G H22603688ORPHA:220386Semilobar holoprosencephaly172
HP:0410030HP:0000204Cleft upper lip1FGFRL1 CL E G H538343693OMIM:194190Wolf-Hirschhorn syndrome.
HP:0410030HP:0000204Cleft upper lip1FKRP CL E G H7914717997OMIM:236670Muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A, 1.157
HP:0410030HP:0000204Cleft upper lip1FKTN CL E G H22183622OMIM:236670Muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A, 1.184
HP:0410030HP:0000204Cleft upper lip1FLII CL E G H23143750ORPHA:819Smith-Magenis syndromeHP:0040283 - Occasional
HP:0410030HP:0000204Cleft upper lip1FLNB CL E G H23173755OMIM:150250Larsen syndrome.233
HP:0410030HP:0000204Cleft upper lip1FOXA2 CL E G H31705022ORPHA:95494Combined pituitary hormone deficiencies, genetic forms
HP:0410030HP:0000204Cleft upper lip1FOXC2 CL E G H23033801OMIM:153400Lymphedema-Distichiasis syndrome20
HP:0410030HP:0000204Cleft upper lip1FOXC2 CL E G H23033801ORPHA:33001Lymphedema-distichiasis syndromeHP:0040283 - Occasional20
HP:0410030HP:0000204Cleft upper lip1FOXH1 CL E G H89283814ORPHA:93925Alobar holoprosencephaly48
HP:0410030HP:0000204Cleft upper lip1FOXH1 CL E G H89283814ORPHA:93924Lobar holoprosencephaly48
HP:0410030HP:0000204Cleft upper lip1FOXH1 CL E G H89283814ORPHA:93926Midline interhemispheric variant of holoprosencephaly48
HP:0410030HP:0000204Cleft upper lip1FOXH1 CL E G H89283814ORPHA:220386Semilobar holoprosencephaly48
HP:0410030HP:0000204Cleft upper lip1FRAS1 CL E G H8014419185OMIM:219000Fraser syndrome.353
HP:0410030HP:0000204Cleft upper lip1FRAS1 CL E G H8014419185ORPHA:2052Fraser syndromeHP:0040283 - Occasional353
HP:0410030HP:0000204Cleft upper lip1FREM2 CL E G H34164025396ORPHA:2052Fraser syndromeHP:0040283 - Occasional263
HP:0410030HP:0000204Cleft upper lip1FZD2 CL E G H25354040ORPHA:3107Autosomal dominant Robinow syndrome
HP:0410030HP:0000204Cleft upper lip1GAS1 CL E G H26194165ORPHA:93925Alobar holoprosencephaly2
HP:0410030HP:0000204Cleft upper lip1GAS1 CL E G H26194165ORPHA:93924Lobar holoprosencephaly2
HP:0410030HP:0000204Cleft upper lip1GAS1 CL E G H26194165ORPHA:93926Midline interhemispheric variant of holoprosencephaly2
HP:0410030HP:0000204Cleft upper lip1GAS1 CL E G H26194165ORPHA:220386Semilobar holoprosencephaly2
HP:0410030HP:0000204Cleft upper lip1GDF11 CL E G H102204216OMIM:619122VERTEBRAL HYPERSEGMENTATION AND OROFACIAL ANOMALIES; VHO
HP:0410030HP:0000204Cleft upper lip1GFRA1 CL E G H26744243ORPHA:1848Renal agenesis, bilateral1
HP:0410030HP:0000204Cleft upper lip1GJA1 CL E G H26974274OMIM:164200Oculodentodigital dysplasia.68
HP:0410030HP:0000204Cleft upper lip1GJA1 CL E G H26974274ORPHA:2710Oculodentodigital dysplasia68
HP:0410030HP:0000204Cleft upper lip1GLI2 CL E G H27364318ORPHA:93925Alobar holoprosencephaly173
HP:0410030HP:0000204Cleft upper lip1GLI2 CL E G H27364318ORPHA:95494Combined pituitary hormone deficiencies, genetic forms173
HP:0410030HP:0000204Cleft upper lip1GLI2 CL E G H27364318OMIM:615849Culler-Jones syndromeHP:0040283 - Occasional173
HP:0410030HP:0000204Cleft upper lip1GLI2 CL E G H27364318OMIM:610829Holoprosencephaly 9173
HP:0410030HP:0000204Cleft upper lip1GLI2 CL E G H27364318ORPHA:93924Lobar holoprosencephaly173
HP:0410030HP:0000204Cleft upper lip1GLI2 CL E G H27364318ORPHA:93926Midline interhemispheric variant of holoprosencephaly173
HP:0410030HP:0000204Cleft upper lip1GLI2 CL E G H27364318ORPHA:220386Semilobar holoprosencephaly173
HP:0410030HP:0000204Cleft upper lip1GLI3 CL E G H27374319OMIM:146510Pallister-Hall syndromeHP:0040283 - Occasional270
HP:0410030HP:0000204Cleft upper lip1GPC3 CL E G H27194451ORPHA:373Simpson-Golabi-Behmel syndromeHP:0040283 - Occasional73
HP:0410030HP:0000204Cleft upper lip1GPC3 CL E G H27194451OMIM:312870Simpson-golabi-behmel syndrome, type 173
HP:0410030HP:0000204Cleft upper lip1GPC4 CL E G H22394452ORPHA:373Simpson-Golabi-Behmel syndromeHP:0040283 - Occasional
HP:0410030HP:0000204Cleft upper lip1GPC4 CL E G H22394452OMIM:312870Simpson-golabi-behmel syndrome, type 1
HP:0410030HP:0000204Cleft upper lip1GREB1L CL E G H8000031042ORPHA:1848Renal agenesis, bilateral
HP:0410030HP:0000204Cleft upper lip1GRHL3 CL E G H5782225839ORPHA:888Van der Woude syndromeHP:0040283 - Occasional12
HP:0410030HP:0000204Cleft upper lip1GRHL3 CL E G H5782225839OMIM:606713Van der woude syndrome 2.12
HP:0410030HP:0000204Cleft upper lip1GRIP1 CL E G H2342618708ORPHA:2052Fraser syndromeHP:0040283 - Occasional80
HP:0410030HP:0000204Cleft upper lip1H4C3 CL E G H83644787OMIM:619758TESSADORI-VAN HAAFTEN NEURODEVELOPMENTAL SYNDROME 1; TEVANED1
HP:0410030HP:0000204Cleft upper lip1HESX1 CL E G H88204877ORPHA:95494Combined pituitary hormone deficiencies, genetic forms21
HP:0410030HP:0000204Cleft upper lip1HOXD13 CL E G H32395136ORPHA:887VACTERL/VATER association25
HP:0410030HP:0000204Cleft upper lip1HYLS1 CL E G H21984426558ORPHA:2189Hydrolethalus31
HP:0410030HP:0000204Cleft upper lip1HYLS1 CL E G H21984426558OMIM:236680Hydrolethalus syndrome 131
HP:0410030HP:0000204Cleft upper lip1IFT80 CL E G H5756029262ORPHA:93271Short rib-polydactyly syndrome, Verma-Naumoff typeHP:0040282 - Frequent65
HP:0410030HP:0000204Cleft upper lip1INTU CL E G H2715229239OMIM:617926OROFACIODIGITAL SYNDROME XVII; OFD17
HP:0410030HP:0000204Cleft upper lip1IQSEC2 CL E G H2309629059ORPHA:819Smith-Magenis syndromeHP:0040283 - Occasional119
HP:0410030HP:0000204Cleft upper lip1IRF6 CL E G H36646121ORPHA:1300Autosomal dominant popliteal pterygium syndrome99
HP:0410030HP:0000204Cleft upper lip1IRF6 CL E G H36646121ORPHA:199302Isolated cleft lip99
HP:0410030HP:0000204Cleft upper lip1IRF6 CL E G H36646121OMIM:608864Orofacial cleft 6, susceptibility to.99
HP:0410030HP:0000204Cleft upper lip1IRF6 CL E G H36646121OMIM:119500Popliteal pterygium syndrome.99
HP:0410030HP:0000204Cleft upper lip1IRF6 CL E G H36646121ORPHA:888Van der Woude syndromeHP:0040283 - Occasional99
HP:0410030HP:0000204Cleft upper lip1IRF6 CL E G H36646121OMIM:119300van der Woude syndrome 1.99
HP:0410030HP:0000204Cleft upper lip1ITGA8 CL E G H85166144ORPHA:1848Renal agenesis, bilateral4
HP:0410030HP:0000204Cleft upper lip1JUP CL E G H37286207ORPHA:34217Naxos diseaseHP:0040282 - Frequent222
HP:0410030HP:0000204Cleft upper lip1KANSL1 CL E G H28405824565OMIM:610443Koolen-De Vries syndrome.283
HP:0410030HP:0000204Cleft upper lip1KAT5 CL E G H105245275OMIM:619103NEURODEVELOPMENTAL DISORDER WITH DYSMORPHIC FACIES, SLEEP DISTURBANCE, AND BRAIN ABNORMALITIES; NEDFASB1
HP:0410030HP:0000204Cleft upper lip1KIF7 CL E G H37465430497OMIM:200990Acrocallosal syndrome167
HP:0410030HP:0000204Cleft upper lip1KIF7 CL E G H37465430497ORPHA:2189Hydrolethalus167
HP:0410030HP:0000204Cleft upper lip1LARGE1 CL E G H92156511OMIM:236670Muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A, 1.136
HP:0410030HP:0000204Cleft upper lip1LETM1 CL E G H39546556OMIM:194190Wolf-Hirschhorn syndrome.2
HP:0410030HP:0000204Cleft upper lip1LETM1 CL E G H39546556ORPHA:280Wolf-Hirschhorn syndromeHP:0040282 - Frequent2
HP:0410030HP:0000204Cleft upper lip1LHX4 CL E G H8988421734ORPHA:95494Combined pituitary hormone deficiencies, genetic forms43
HP:0410030HP:0000204Cleft upper lip1LMX1B CL E G H40106654OMIM:161200Nail-Patella syndrome.165
HP:0410030HP:0000204Cleft upper lip1MASP1 CL E G H56486901OMIM:2579203mc syndrome 1.21
HP:0410030HP:0000204Cleft upper lip1MED12 CL E G H996811957OMIM:301068HARDIKAR SYNDROME; HDKR228
HP:0410030HP:0000204Cleft upper lip1MED12 CL E G H996811957OMIM:305450Opitz-Kaveggia syndrome.228
HP:0410030HP:0000204Cleft upper lip1MEIS2 CL E G H42127001OMIM:600987Cleft palate, cardiac defects, and mental retardation.7
HP:0410030HP:0000204Cleft upper lip1MEOX1 CL E G H42227013OMIM:214300Klippel-Feil syndrome, autosomal recessive.5
HP:0410030HP:0000204Cleft upper lip1MID1 CL E G H42817095OMIM:300000Opitz gbbb syndrome, type I.57
HP:0410030HP:0000204Cleft upper lip1MSX1 CL E G H44877391ORPHA:199302Isolated cleft lip12
HP:0410030HP:0000204Cleft upper lip1MSX1 CL E G H44877391OMIM:608874OROFACIAL CLEFT 5; OFC512
HP:0410030HP:0000204Cleft upper lip1MSX2 CL E G H44887392OMIM:168500Parietal foramina.45
HP:0410030HP:0000204Cleft upper lip1NAA10 CL E G H826018704OMIM:309800Microphthalmia, syndromic 1.23
HP:0410030HP:0000204Cleft upper lip1NBN CL E G H46837652ORPHA:647Nijmegen breakage syndrome706
HP:0410030HP:0000204Cleft upper lip1NBN CL E G H46837652OMIM:251260Nijmegen breakage syndrome.706
HP:0410030HP:0000204Cleft upper lip1NECTIN1 CL E G H58189706OMIM:225060Cleft lip/palate-ectodermal dysplasia syndrome.4
HP:0410030HP:0000204Cleft upper lip1NECTIN1 CL E G H58189706ORPHA:3253Cleft lip/palate-ectodermal dysplasia syndromeHP:0040281 - Very frequent4
HP:0410030HP:0000204Cleft upper lip1NECTIN1 CL E G H58189706ORPHA:199302Isolated cleft lip4
HP:0410030HP:0000204Cleft upper lip1NEK1 CL E G H47507744ORPHA:2751Orofaciodigital syndrome type 2101
HP:0410030HP:0000204Cleft upper lip1NEK1 CL E G H47507744OMIM:263520Short-Rib thoracic dysplasia 6 with or without polydactyly101
HP:0410030HP:0000204Cleft upper lip1NELFA CL E G H746912768ORPHA:280Wolf-Hirschhorn syndromeHP:0040282 - Frequent
HP:0410030HP:0000204Cleft upper lip1NIPBL CL E G H2583628862OMIM:122470Cornelia de Lange syndrome 1.494
HP:0410030HP:0000204Cleft upper lip1NODAL CL E G H48387865ORPHA:93925Alobar holoprosencephaly45
HP:0410030HP:0000204Cleft upper lip1NODAL CL E G H48387865ORPHA:93924Lobar holoprosencephaly45
HP:0410030HP:0000204Cleft upper lip1NODAL CL E G H48387865ORPHA:93926Midline interhemispheric variant of holoprosencephaly45
HP:0410030HP:0000204Cleft upper lip1NODAL CL E G H48387865ORPHA:220386Semilobar holoprosencephaly45
HP:0410030HP:0000204Cleft upper lip1NSD2 CL E G H746812766OMIM:194190Wolf-Hirschhorn syndrome.118
HP:0410030HP:0000204Cleft upper lip1NSD2 CL E G H746812766ORPHA:280Wolf-Hirschhorn syndromeHP:0040282 - Frequent118
HP:0410030HP:0000204Cleft upper lip1NSDHL CL E G H5081413398OMIM:308050Congenital hemidysplasia with ichthyosiform erythroderma and limb defects.34
HP:0410030HP:0000204Cleft upper lip1NUAK2 CL E G H8178829558OMIM:619452ANENCEPHALY 2; ANPH2
HP:0410030HP:0000204Cleft upper lip1OFD1 CL E G H84812567OMIM:311200Orofaciodigital syndrome I201
HP:0410030HP:0000204Cleft upper lip1OFD1 CL E G H84812567ORPHA:2750Orofaciodigital syndrome type 1201
HP:0410030HP:0000204Cleft upper lip1OTX2 CL E G H50158522ORPHA:95494Combined pituitary hormone deficiencies, genetic forms41
HP:0410030HP:0000204Cleft upper lip1PAX3 CL E G H50778617ORPHA:894Waardenburg syndrome type 1HP:0040283 - Occasional59
HP:0410030HP:0000204Cleft upper lip1PHF8 CL E G H2313320672ORPHA:85287X-linked intellectual disability, Siderius typeHP:0040281 - Very frequent23
HP:0410030HP:0000204Cleft upper lip1PHGDH CL E G H262278923OMIM:256520Neu-Laxova syndrome.37
HP:0410030HP:0000204Cleft upper lip1PIGG CL E G H5487225985ORPHA:280Wolf-Hirschhorn syndromeHP:0040282 - Frequent7
HP:0410030HP:0000204Cleft upper lip1PIGN CL E G H235568967ORPHA:2059Fryns syndrome37
HP:0410030HP:0000204Cleft upper lip1PIGV CL E G H5565026031OMIM:239300Hyperphosphatasia with mental retardation57
HP:0410030HP:0000204Cleft upper lip1PLCH1 CL E G H2300729185OMIM:619895
HP:0410030HP:0000204Cleft upper lip1PLCH1 CL E G H2300729185ORPHA:93925Alobar holoprosencephaly
HP:0410030HP:0000204Cleft upper lip1POLR1B CL E G H8417220454ORPHA:861Treacher-Collins syndromeHP:0040283 - Occasional
HP:0410030HP:0000204Cleft upper lip1POLR1C CL E G H953320194ORPHA:861Treacher-Collins syndromeHP:0040283 - Occasional38
HP:0410030HP:0000204Cleft upper lip1POLR1D CL E G H5108220422ORPHA:861Treacher-Collins syndromeHP:0040283 - Occasional31
HP:0410030HP:0000204Cleft upper lip1POMT1 CL E G H105859202OMIM:236670Muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A, 1.213
HP:0410030HP:0000204Cleft upper lip1POMT2 CL E G H2995419743OMIM:236670Muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A, 1.221
HP:0410030HP:0000204Cleft upper lip1POMT2 CL E G H2995419743OMIM:613150Muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A, 2221
HP:0410030HP:0000204Cleft upper lip1PORCN CL E G H6484017652OMIM:305600Focal dermal hypoplasia.20
HP:0410030HP:0000204Cleft upper lip1POU1F1 CL E G H54499210ORPHA:95494Combined pituitary hormone deficiencies, genetic forms36
HP:0410030HP:0000204Cleft upper lip1PROKR2 CL E G H12867415836OMIM:244200Hypogonadotropic hypogonadism 3 with or without anosmia.34
HP:0410030HP:0000204Cleft upper lip1PROP1 CL E G H56269455ORPHA:95494Combined pituitary hormone deficiencies, genetic forms54
HP:0410030HP:0000204Cleft upper lip1PTCH1 CL E G H57279585ORPHA:93925Alobar holoprosencephaly665
HP:0410030HP:0000204Cleft upper lip1PTCH1 CL E G H57279585OMIM:109400Basal cell nevus syndrome665
HP:0410030HP:0000204Cleft upper lip1PTCH1 CL E G H57279585OMIM:610828Holoprosencephaly 7665
HP:0410030HP:0000204Cleft upper lip1PTCH1 CL E G H57279585ORPHA:93924Lobar holoprosencephaly665
HP:0410030HP:0000204Cleft upper lip1PTCH1 CL E G H57279585ORPHA:93926Midline interhemispheric variant of holoprosencephaly665
HP:0410030HP:0000204Cleft upper lip1PTCH1 CL E G H57279585ORPHA:220386Semilobar holoprosencephaly665
HP:0410030HP:0000204Cleft upper lip1PTCH2 CL E G H86439586OMIM:109400Basal cell nevus syndrome40
HP:0410030HP:0000204Cleft upper lip1RAB5IF CL E G H5596915870OMIM:616994
HP:0410030HP:0000204Cleft upper lip1RAI1 CL E G H107439834ORPHA:819Smith-Magenis syndromeHP:0040283 - Occasional150
HP:0410030HP:0000204Cleft upper lip1RET CL E G H59799967ORPHA:1848Renal agenesis, bilateral572
HP:0410030HP:0000204Cleft upper lip1RIPK4 CL E G H54101496ORPHA:1234Bartsocas-Papas syndrome69
HP:0410030HP:0000204Cleft upper lip1RIPK4 CL E G H54101496OMIM:263650Popliteal pterygium syndrome, Bartsocas-Papas type 169
HP:0410030HP:0000204Cleft upper lip1RPGRIP1L CL E G H2332229168OMIM:611561Meckel syndrome, type 5.167
HP:0410030HP:0000204Cleft upper lip1RPL5 CL E G H612510360OMIM:612561Diamond-Blackfan anemia 640
HP:0410030HP:0000204Cleft upper lip1RPS19 CL E G H622310402OMIM:105650Diamond-Blackfan anemia 1.42
HP:0410030HP:0000204Cleft upper lip1RSPO2 CL E G H34041928583OMIM:618021Tetraamelia syndrome 2
HP:0410030HP:0000204Cleft upper lip1SEMA3E CL E G H972310727ORPHA:138CHARGE syndromeHP:0040282 - Frequent16
HP:0410030HP:0000204Cleft upper lip1SF3B2 CL E G H1099210769OMIM:164210Hemifacial microsomia.2
HP:0410030HP:0000204Cleft upper lip1SF3B4 CL E G H1026210771OMIM:154400Acrofacial dysostosis 1, Nager type.49
HP:0410030HP:0000204Cleft upper lip1SF3B4 CL E G H1026210771ORPHA:245Nager syndrome49
HP:0410030HP:0000204Cleft upper lip1SHH CL E G H646910848ORPHA:93925Alobar holoprosencephaly67
HP:0410030HP:0000204Cleft upper lip1SHH CL E G H646910848ORPHA:93924Lobar holoprosencephaly67
HP:0410030HP:0000204Cleft upper lip1SHH CL E G H646910848ORPHA:93926Midline interhemispheric variant of holoprosencephaly67
HP:0410030HP:0000204Cleft upper lip1SHH CL E G H646910848ORPHA:220386Semilobar holoprosencephaly67
HP:0410030HP:0000204Cleft upper lip1SHH CL E G H646910848OMIM:147250Solitary median maxillary central incisor67
HP:0410030HP:0000204Cleft upper lip1SIX3 CL E G H649610889ORPHA:93925Alobar holoprosencephaly32
HP:0410030HP:0000204Cleft upper lip1SIX3 CL E G H649610889OMIM:157170Holoprosencephaly 232
HP:0410030HP:0000204Cleft upper lip1SIX3 CL E G H649610889ORPHA:93924Lobar holoprosencephaly32
HP:0410030HP:0000204Cleft upper lip1SIX3 CL E G H649610889ORPHA:93926Midline interhemispheric variant of holoprosencephaly32
HP:0410030HP:0000204Cleft upper lip1SIX3 CL E G H649610889ORPHA:220386Semilobar holoprosencephaly32
HP:0410030HP:0000204Cleft upper lip1SLC29A3 CL E G H5531523096ORPHA:168569H syndromeHP:0040283 - Occasional68
HP:0410030HP:0000204Cleft upper lip1SLC2A10 CL E G H8103113444ORPHA:3342Arterial tortuosity syndrome178
HP:0410030HP:0000204Cleft upper lip1SMAD4 CL E G H40896770ORPHA:2588Myhre syndrome504
HP:0410030HP:0000204Cleft upper lip1SMC1A CL E G H824311111ORPHA:220386Semilobar holoprosencephaly135
HP:0410030HP:0000204Cleft upper lip1SMO CL E G H660811119OMIM:241800Hypothalamic hamartomascongenital hypothalamic hamartoma syndrome, included22
HP:0410030HP:0000204Cleft upper lip1SMOC1 CL E G H6409320318ORPHA:1106Microphthalmia with limb anomaliesHP:0040282 - Frequent15
HP:0410030HP:0000204Cleft upper lip1SMOC1 CL E G H6409320318OMIM:206920Microphthalmia with limb anomalies.15
HP:0410030HP:0000204Cleft upper lip1SMPD4 CL E G H5562732949OMIM:618622NEURODEVELOPMENTAL DISORDER WITH MICROCEPHALY, ARTHROGRYPOSIS, AND STRUCTURAL BRAIN ANOMALIES; NEDMABA1
HP:0410030HP:0000204Cleft upper lip1SPECC1L CL E G H2338429022OMIM:600251Facial clefting, oblique, 1.6
HP:0410030HP:0000204Cleft upper lip1SPOP CL E G H840511254OMIM:618829NABAIS SA-DE VRIES SYNDROME, TYPE 2; NSDVS216
HP:0410030HP:0000204Cleft upper lip1STAG2 CL E G H1073511355ORPHA:93925Alobar holoprosencephaly1
HP:0410030HP:0000204Cleft upper lip1STAG2 CL E G H1073511355OMIM:301043HOLOPROSENCEPHALY 13, X-LINKED; HPE131
HP:0410030HP:0000204Cleft upper lip1STAG2 CL E G H1073511355ORPHA:220386Semilobar holoprosencephaly1
HP:0410030HP:0000204Cleft upper lip1STIL CL E G H649110879ORPHA:93925Alobar holoprosencephaly99
HP:0410030HP:0000204Cleft upper lip1STIL CL E G H649110879ORPHA:93924Lobar holoprosencephaly99
HP:0410030HP:0000204Cleft upper lip1STIL CL E G H649110879ORPHA:93926Midline interhemispheric variant of holoprosencephaly99
HP:0410030HP:0000204Cleft upper lip1STIL CL E G H649110879ORPHA:220386Semilobar holoprosencephaly99
HP:0410030HP:0000204Cleft upper lip1SUFU CL E G H5168416466OMIM:109400Basal cell nevus syndrome124
HP:0410030HP:0000204Cleft upper lip1SUMO1 CL E G H734112502OMIM:613705Orofacial cleft 108
HP:0410030HP:0000204Cleft upper lip1TAPT1 CL E G H20201826887OMIM:616897Osteochondrodysplasia, complex lethal, Symoens-Barnes-Gistelinck type2
HP:0410030HP:0000204Cleft upper lip1TCOF1 CL E G H694911654ORPHA:861Treacher-Collins syndromeHP:0040283 - Occasional140
HP:0410030HP:0000204Cleft upper lip1TCTN2 CL E G H7986725774OMIM:613885Meckel syndrome, type 8.76
HP:0410030HP:0000204Cleft upper lip1TCTN3 CL E G H2612324519ORPHA:2753Orofaciodigital syndrome type 431
HP:0410030HP:0000204Cleft upper lip1TDGF1 CL E G H699711701ORPHA:93925Alobar holoprosencephaly1
HP:0410030HP:0000204Cleft upper lip1TDGF1 CL E G H699711701ORPHA:93924Lobar holoprosencephaly1
HP:0410030HP:0000204Cleft upper lip1TDGF1 CL E G H699711701ORPHA:93926Midline interhemispheric variant of holoprosencephaly1
HP:0410030HP:0000204Cleft upper lip1TDGF1 CL E G H699711701ORPHA:220386Semilobar holoprosencephaly1
HP:0410030HP:0000204Cleft upper lip1TFAP2A CL E G H702011742ORPHA:1297Branchio-oculo-facial syndrome12
HP:0410030HP:0000204Cleft upper lip1TFAP2A CL E G H702011742OMIM:113620Branchiooculofacial syndrome.12
HP:0410030HP:0000204Cleft upper lip1TGDS CL E G H2348320324OMIM:616145Catel-Manzke syndrome.6
HP:0410030HP:0000204Cleft upper lip1TGIF1 CL E G H705011776ORPHA:93925Alobar holoprosencephaly32
HP:0410030HP:0000204Cleft upper lip1TGIF1 CL E G H705011776OMIM:142946Holoprosencephaly 432
HP:0410030HP:0000204Cleft upper lip1TGIF1 CL E G H705011776ORPHA:93924Lobar holoprosencephaly32
HP:0410030HP:0000204Cleft upper lip1TGIF1 CL E G H705011776ORPHA:93926Midline interhemispheric variant of holoprosencephaly32
HP:0410030HP:0000204Cleft upper lip1TGIF1 CL E G H705011776ORPHA:220386Semilobar holoprosencephaly32
HP:0410030HP:0000204Cleft upper lip1TMCO1 CL E G H5449918188ORPHA:1394Cerebrofaciothoracic dysplasiaHP:0040283 - Occasional6
HP:0410030HP:0000204Cleft upper lip1TMCO1 CL E G H5449918188OMIM:213980Craniofacial dysmorphism, skeletal anomalies, and mental retardation syndrome.6
HP:0410030HP:0000204Cleft upper lip1TP63 CL E G H862615979ORPHA:1072Ankyloblepharon filiforme adnatum-cleft palate syndrome140
HP:0410030HP:0000204Cleft upper lip1TP63 CL E G H862615979OMIM:106260Ankyloblepharon-Ectodermal defects-cleft lip/palate.140
HP:0410030HP:0000204Cleft upper lip1TP63 CL E G H862615979ORPHA:199302Isolated cleft lip140
HP:0410030HP:0000204Cleft upper lip1TP63 CL E G H862615979OMIM:129400Rapp-Hodgkin syndrome.140
HP:0410030HP:0000204Cleft upper lip1TRAPPC9 CL E G H8369630832OMIM:613192Mental retardation, autosomal recessive 13HP:0040283 - Occasional158
HP:0410030HP:0000204Cleft upper lip1TXNL4A CL E G H1090730551OMIM:608572Burn-Mckeown syndrome.19
HP:0410030HP:0000204Cleft upper lip1VAX1 CL E G H1102312660OMIM:614402Microphthalmia, syndromic 11.5
HP:0410030HP:0000204Cleft upper lip1WDR35 CL E G H5753929250ORPHA:93271Short rib-polydactyly syndrome, Verma-Naumoff typeHP:0040282 - Frequent136
HP:0410030HP:0000204Cleft upper lip1WLS CL E G H7997130238OMIM:619648ZAKI SYNDROME; ZKS
HP:0410030HP:0000204Cleft upper lip1WNT3 CL E G H747312782OMIM:273395Tetraamelia, autosomal recessive.12
HP:0410030HP:0000204Cleft upper lip1WNT5A CL E G H747412784ORPHA:3107Autosomal dominant Robinow syndrome98
HP:0410030HP:0000204Cleft upper lip1WNT9B CL E G H748412779ORPHA:1848Renal agenesis, bilateral
HP:0410030HP:0000204Cleft upper lip1YAP1 CL E G H1041316262OMIM:120433Coloboma, ocular, with or without hearing impairment, cleft lip/palate, and/or mental retardationHP:0040283 - Occasional2
HP:0410030HP:0000204Cleft upper lip1YAP1 CL E G H1041316262ORPHA:1473Uveal coloboma-cleft lip and palate-intellectual disability2
HP:0410030HP:0000204Cleft upper lip1ZIC2 CL E G H754612873ORPHA:93925Alobar holoprosencephaly34
HP:0410030HP:0000204Cleft upper lip1ZIC2 CL E G H754612873ORPHA:93924Lobar holoprosencephaly34
HP:0410030HP:0000204Cleft upper lip1ZIC2 CL E G H754612873ORPHA:93926Midline interhemispheric variant of holoprosencephaly34
HP:0410030HP:0000204Cleft upper lip1ZIC2 CL E G H754612873ORPHA:220386Semilobar holoprosencephaly34
HP:0410030HP:0000204Cleft upper lip1ZSWIM6 CL E G H5768829316OMIM:603671Acromelic frontonasal dysostosis.5
HP:0410030HP:0000204Cleft upper lip1ZSWIM6 CL E G H5768829316ORPHA:1827Acromelic frontonasal dysplasia5
HP:0410030HP:0000161Median cleft lip2ALX3 CL E G H257449OMIM:136760Frontonasal dysplasia 1.9
HP:0410030HP:0100335Non-midline cleft lip2B3GALT6 CL E G H12679217978ORPHA:2725Eye defects-arachnodactyly-cardiopathy syndromeHP:0040281 - Very frequent38
HP:0410030HP:0100335Non-midline cleft lip2CDH1 CL E G H9991748ORPHA:1997Blepharo-cheilo-odontic syndrome1003
HP:0410030HP:0000161Median cleft lip2CDON CL E G H5093717104ORPHA:93925Alobar holoprosencephalyHP:0040282 - Frequent200
HP:0410030HP:0000161Median cleft lip2CDON CL E G H5093717104ORPHA:93924Lobar holoprosencephalyHP:0040282 - Frequent200
HP:0410030HP:0000161Median cleft lip2CDON CL E G H5093717104ORPHA:93926Midline interhemispheric variant of holoprosencephalyHP:0040282 - Frequent200
HP:0410030HP:0000161Median cleft lip2CDON CL E G H5093717104ORPHA:220386Semilobar holoprosencephalyHP:0040282 - Frequent200
HP:0410030HP:0100335Non-midline cleft lip2CHUK CL E G H11471974OMIM:619339BARTSOCAS-PAPAS SYNDROME 2; BPS23
HP:0410030HP:0100335Non-midline cleft lip2CILK1 CL E G H2285821219OMIM:612651ENDOCRINE-CEREBROOSTEODYSPLASIA
HP:0410030HP:0000161Median cleft lip2CILK1 CL E G H2285821219OMIM:612651ENDOCRINE-CEREBROOSTEODYSPLASIA
HP:0410030HP:0011340Incomplete cleft of the upper lip2CPLANE1 CL E G H6525025801OMIM:277170Orofaciodigital syndrome VI
HP:0410030HP:0100335Non-midline cleft lip2CTNND1 CL E G H15002515ORPHA:1997Blepharo-cheilo-odontic syndrome
HP:0410030HP:0000161Median cleft lip2DDX59 CL E G H8347925360ORPHA:2919Orofaciodigital syndrome type 5HP:0040281 - Very frequent2
HP:0410030HP:0100335Non-midline cleft lip2DDX59 CL E G H8347925360ORPHA:2919Orofaciodigital syndrome type 5HP:0040283 - Occasional2
HP:0410030HP:0000161Median cleft lip2DDX59 CL E G H8347925360OMIM:174300Orofaciodigital syndrome V.2
HP:0410030HP:0100335Non-midline cleft lip2DHODH CL E G H17232867ORPHA:246Postaxial acrofacial dysostosisHP:0040282 - Frequent59
HP:0410030HP:0000161Median cleft lip2DISP1 CL E G H8497619711ORPHA:93925Alobar holoprosencephalyHP:0040282 - Frequent22
HP:0410030HP:0000161Median cleft lip2DISP1 CL E G H8497619711ORPHA:93924Lobar holoprosencephalyHP:0040282 - Frequent22
HP:0410030HP:0000161Median cleft lip2DISP1 CL E G H8497619711ORPHA:93926Midline interhemispheric variant of holoprosencephalyHP:0040282 - Frequent22
HP:0410030HP:0000161Median cleft lip2DISP1 CL E G H8497619711ORPHA:220386Semilobar holoprosencephalyHP:0040282 - Frequent22
HP:0410030HP:0000161Median cleft lip2DLL1 CL E G H285142908ORPHA:93925Alobar holoprosencephalyHP:0040282 - Frequent3
HP:0410030HP:0000161Median cleft lip2DLL1 CL E G H285142908ORPHA:93924Lobar holoprosencephalyHP:0040282 - Frequent3
HP:0410030HP:0000161Median cleft lip2DLL1 CL E G H285142908ORPHA:93926Midline interhemispheric variant of holoprosencephalyHP:0040282 - Frequent3
HP:0410030HP:0000161Median cleft lip2DLL1 CL E G H285142908ORPHA:220386Semilobar holoprosencephalyHP:0040282 - Frequent3
HP:0410030HP:0100335Non-midline cleft lip2DLX4 CL E G H17482917OMIM:616788Orofacial cleft 151
HP:0410030HP:0000161Median cleft lip2DVL1 CL E G H18553084ORPHA:3107Autosomal dominant Robinow syndrome14
HP:0410030HP:0000161Median cleft lip2DVL3 CL E G H18573087ORPHA:3107Autosomal dominant Robinow syndrome5
HP:0410030HP:0000161Median cleft lip2DYNC2LI1 CL E G H5162624595OMIM:617088Short-rib thoracic dysplasia 15 with polydactyly7
HP:0410030HP:0000161Median cleft lip2EPG5 CL E G H5772429331OMIM:242840Vici syndrome40
HP:0410030HP:0000161Median cleft lip2FAM20C CL E G H5697522140ORPHA:1832Lethal osteosclerotic bone dysplasia35
HP:0410030HP:0100335Non-midline cleft lip2FGF20 CL E G H262813677ORPHA:1848Renal agenesis, bilateralHP:0040283 - Occasional2
HP:0410030HP:0000161Median cleft lip2FGF8 CL E G H22533686ORPHA:93925Alobar holoprosencephalyHP:0040282 - Frequent17
HP:0410030HP:0000161Median cleft lip2FGF8 CL E G H22533686ORPHA:93924Lobar holoprosencephalyHP:0040282 - Frequent17
HP:0410030HP:0000161Median cleft lip2FGF8 CL E G H22533686ORPHA:93926Midline interhemispheric variant of holoprosencephalyHP:0040282 - Frequent17
HP:0410030HP:0000161Median cleft lip2FGF8 CL E G H22533686ORPHA:220386Semilobar holoprosencephalyHP:0040282 - Frequent17
HP:0410030HP:0100335Non-midline cleft lip2FGFR1 CL E G H22603688ORPHA:2117Hartsfield syndromeHP:0040281 - Very frequent172
HP:0410030HP:0000161Median cleft lip2FGFR1 CL E G H22603688ORPHA:93924Lobar holoprosencephalyHP:0040282 - Frequent172
HP:0410030HP:0000161Median cleft lip2FGFR1 CL E G H22603688ORPHA:220386Semilobar holoprosencephalyHP:0040282 - Frequent172
HP:0410030HP:0000161Median cleft lip2FOXA2 CL E G H31705022ORPHA:95494Combined pituitary hormone deficiencies, genetic forms
HP:0410030HP:0000161Median cleft lip2FOXH1 CL E G H89283814ORPHA:93925Alobar holoprosencephalyHP:0040282 - Frequent48
HP:0410030HP:0000161Median cleft lip2FOXH1 CL E G H89283814ORPHA:93924Lobar holoprosencephalyHP:0040282 - Frequent48
HP:0410030HP:0000161Median cleft lip2FOXH1 CL E G H89283814ORPHA:93926Midline interhemispheric variant of holoprosencephalyHP:0040282 - Frequent48
HP:0410030HP:0000161Median cleft lip2FOXH1 CL E G H89283814ORPHA:220386Semilobar holoprosencephalyHP:0040282 - Frequent48
HP:0410030HP:0000161Median cleft lip2FZD2 CL E G H25354040ORPHA:3107Autosomal dominant Robinow syndrome
HP:0410030HP:0000161Median cleft lip2GAS1 CL E G H26194165ORPHA:93925Alobar holoprosencephalyHP:0040282 - Frequent2
HP:0410030HP:0000161Median cleft lip2GAS1 CL E G H26194165ORPHA:93924Lobar holoprosencephalyHP:0040282 - Frequent2
HP:0410030HP:0000161Median cleft lip2GAS1 CL E G H26194165ORPHA:93926Midline interhemispheric variant of holoprosencephalyHP:0040282 - Frequent2
HP:0410030HP:0000161Median cleft lip2GAS1 CL E G H26194165ORPHA:220386Semilobar holoprosencephalyHP:0040282 - Frequent2
HP:0410030HP:0100335Non-midline cleft lip2GDF11 CL E G H102204216OMIM:619122VERTEBRAL HYPERSEGMENTATION AND OROFACIAL ANOMALIES; VHO
HP:0410030HP:0100335Non-midline cleft lip2GFRA1 CL E G H26744243ORPHA:1848Renal agenesis, bilateralHP:0040283 - Occasional1
HP:0410030HP:0000161Median cleft lip2GJA1 CL E G H26974274ORPHA:2710Oculodentodigital dysplasiaHP:0040282 - Frequent68
HP:0410030HP:0100335Non-midline cleft lip2GJA1 CL E G H26974274ORPHA:2710Oculodentodigital dysplasiaHP:0040283 - Occasional68
HP:0410030HP:0000161Median cleft lip2GLI2 CL E G H27364318ORPHA:93925Alobar holoprosencephalyHP:0040282 - Frequent173
HP:0410030HP:0000161Median cleft lip2GLI2 CL E G H27364318ORPHA:95494Combined pituitary hormone deficiencies, genetic forms173
HP:0410030HP:0100335Non-midline cleft lip2GLI2 CL E G H27364318OMIM:610829Holoprosencephaly 9173
HP:0410030HP:0000161Median cleft lip2GLI2 CL E G H27364318ORPHA:93924Lobar holoprosencephalyHP:0040282 - Frequent173
HP:0410030HP:0000161Median cleft lip2GLI2 CL E G H27364318ORPHA:93926Midline interhemispheric variant of holoprosencephalyHP:0040282 - Frequent173
HP:0410030HP:0000161Median cleft lip2GLI2 CL E G H27364318ORPHA:220386Semilobar holoprosencephalyHP:0040282 - Frequent173
HP:0410030HP:0009101Submucous cleft lip2GPC3 CL E G H27194451OMIM:312870Simpson-golabi-behmel syndrome, type 173
HP:0410030HP:0009101Submucous cleft lip2GPC4 CL E G H22394452OMIM:312870Simpson-golabi-behmel syndrome, type 1
HP:0410030HP:0100335Non-midline cleft lip2GREB1L CL E G H8000031042ORPHA:1848Renal agenesis, bilateralHP:0040283 - Occasional
HP:0410030HP:0000161Median cleft lip2H4C3 CL E G H83644787OMIM:619758TESSADORI-VAN HAAFTEN NEURODEVELOPMENTAL SYNDROME 1; TEVANED1
HP:0410030HP:0000161Median cleft lip2HESX1 CL E G H88204877ORPHA:95494Combined pituitary hormone deficiencies, genetic forms21
HP:0410030HP:0100335Non-midline cleft lip2HOXD13 CL E G H32395136ORPHA:887VACTERL/VATER associationHP:0040283 - Occasional25
HP:0410030HP:0100335Non-midline cleft lip2HYLS1 CL E G H21984426558ORPHA:2189Hydrolethalus31
HP:0410030HP:0000161Median cleft lip2HYLS1 CL E G H21984426558OMIM:236680Hydrolethalus syndrome 1.31
HP:0410030HP:0000161Median cleft lip2INTU CL E G H2715229239OMIM:617926OROFACIODIGITAL SYNDROME XVII; OFD17
HP:0410030HP:0100335Non-midline cleft lip2IRF6 CL E G H36646121ORPHA:1300Autosomal dominant popliteal pterygium syndromeHP:0040282 - Frequent99
HP:0410030HP:0100335Non-midline cleft lip2IRF6 CL E G H36646121ORPHA:199302Isolated cleft lipHP:0040282 - Frequent99
HP:0410030HP:0100335Non-midline cleft lip2ITGA8 CL E G H85166144ORPHA:1848Renal agenesis, bilateralHP:0040283 - Occasional4
HP:0410030HP:0100335Non-midline cleft lip2KAT5 CL E G H105245275OMIM:619103NEURODEVELOPMENTAL DISORDER WITH DYSMORPHIC FACIES, SLEEP DISTURBANCE, AND BRAIN ABNORMALITIES; NEDFASB1
HP:0410030HP:0100335Non-midline cleft lip2KIF7 CL E G H37465430497ORPHA:2189Hydrolethalus167
HP:0410030HP:0000161Median cleft lip2LHX4 CL E G H8988421734ORPHA:95494Combined pituitary hormone deficiencies, genetic forms43
HP:0410030HP:0100335Non-midline cleft lip2MED12 CL E G H996811957OMIM:301068HARDIKAR SYNDROME; HDKR228
HP:0410030HP:0100335Non-midline cleft lip2MID1 CL E G H42817095OMIM:300000Opitz gbbb syndrome, type I57
HP:0410030HP:0100335Non-midline cleft lip2MSX1 CL E G H44877391ORPHA:199302Isolated cleft lipHP:0040282 - Frequent12
HP:0410030HP:0100335Non-midline cleft lip2NBN CL E G H46837652ORPHA:647Nijmegen breakage syndromeHP:0040283 - Occasional706
HP:0410030HP:0100335Non-midline cleft lip2NECTIN1 CL E G H58189706ORPHA:3253Cleft lip/palate-ectodermal dysplasia syndrome4
HP:0410030HP:0100335Non-midline cleft lip2NECTIN1 CL E G H58189706ORPHA:199302Isolated cleft lipHP:0040282 - Frequent4
HP:0410030HP:0000161Median cleft lip2NEK1 CL E G H47507744ORPHA:2751Orofaciodigital syndrome type 2HP:0040282 - Frequent101
HP:0410030HP:0000161Median cleft lip2NEK1 CL E G H47507744OMIM:263520Short-Rib thoracic dysplasia 6 with or without polydactyly.101
HP:0410030HP:0000161Median cleft lip2NODAL CL E G H48387865ORPHA:93925Alobar holoprosencephalyHP:0040282 - Frequent45
HP:0410030HP:0000161Median cleft lip2NODAL CL E G H48387865ORPHA:93924Lobar holoprosencephalyHP:0040282 - Frequent45
HP:0410030HP:0000161Median cleft lip2NODAL CL E G H48387865ORPHA:93926Midline interhemispheric variant of holoprosencephalyHP:0040282 - Frequent45
HP:0410030HP:0000161Median cleft lip2NODAL CL E G H48387865ORPHA:220386Semilobar holoprosencephalyHP:0040282 - Frequent45
HP:0410030HP:0000161Median cleft lip2NUAK2 CL E G H8178829558OMIM:619452ANENCEPHALY 2; ANPH2
HP:0410030HP:0000161Median cleft lip2OFD1 CL E G H84812567OMIM:311200Orofaciodigital syndrome I.201
HP:0410030HP:0000161Median cleft lip2OFD1 CL E G H84812567ORPHA:2750Orofaciodigital syndrome type 1HP:0040281 - Very frequent201
HP:0410030HP:0000161Median cleft lip2OTX2 CL E G H50158522ORPHA:95494Combined pituitary hormone deficiencies, genetic forms41
HP:0410030HP:0000161Median cleft lip2PIGN CL E G H235568967ORPHA:2059Fryns syndromeHP:0040282 - Frequent37
HP:0410030HP:0100335Non-midline cleft lip2PIGN CL E G H235568967ORPHA:2059Fryns syndromeHP:0040282 - Frequent37
HP:0410030HP:0000161Median cleft lip2PLCH1 CL E G H2300729185OMIM:619895
HP:0410030HP:0000161Median cleft lip2PLCH1 CL E G H2300729185ORPHA:93925Alobar holoprosencephalyHP:0040282 - Frequent
HP:0410030HP:0000161Median cleft lip2POU1F1 CL E G H54499210ORPHA:95494Combined pituitary hormone deficiencies, genetic forms36
HP:0410030HP:0000161Median cleft lip2PROP1 CL E G H56269455ORPHA:95494Combined pituitary hormone deficiencies, genetic forms54
HP:0410030HP:0000161Median cleft lip2PTCH1 CL E G H57279585ORPHA:93925Alobar holoprosencephalyHP:0040282 - Frequent665
HP:0410030HP:0100335Non-midline cleft lip2PTCH1 CL E G H57279585OMIM:610828Holoprosencephaly 7665
HP:0410030HP:0000161Median cleft lip2PTCH1 CL E G H57279585OMIM:610828Holoprosencephaly 7665
HP:0410030HP:0000161Median cleft lip2PTCH1 CL E G H57279585ORPHA:93924Lobar holoprosencephalyHP:0040282 - Frequent665
HP:0410030HP:0000161Median cleft lip2PTCH1 CL E G H57279585ORPHA:93926Midline interhemispheric variant of holoprosencephalyHP:0040282 - Frequent665
HP:0410030HP:0000161Median cleft lip2PTCH1 CL E G H57279585ORPHA:220386Semilobar holoprosencephalyHP:0040282 - Frequent665
HP:0410030HP:0100335Non-midline cleft lip2RAB5IF CL E G H5596915870OMIM:616994
HP:0410030HP:0100335Non-midline cleft lip2RET CL E G H59799967ORPHA:1848Renal agenesis, bilateralHP:0040283 - Occasional572
HP:0410030HP:0000161Median cleft lip2RIPK4 CL E G H54101496ORPHA:1234Bartsocas-Papas syndromeHP:0040281 - Very frequent69
HP:0410030HP:0100335Non-midline cleft lip2RSPO2 CL E G H34041928583OMIM:618021Tetraamelia syndrome 2
HP:0410030HP:0100335Non-midline cleft lip2SF3B4 CL E G H1026210771ORPHA:245Nager syndromeHP:0040283 - Occasional49
HP:0410030HP:0000161Median cleft lip2SHH CL E G H646910848ORPHA:93925Alobar holoprosencephalyHP:0040282 - Frequent67
HP:0410030HP:0000161Median cleft lip2SHH CL E G H646910848ORPHA:93924Lobar holoprosencephalyHP:0040282 - Frequent67
HP:0410030HP:0000161Median cleft lip2SHH CL E G H646910848ORPHA:93926Midline interhemispheric variant of holoprosencephalyHP:0040282 - Frequent67
HP:0410030HP:0000161Median cleft lip2SHH CL E G H646910848ORPHA:220386Semilobar holoprosencephalyHP:0040282 - Frequent67
HP:0410030HP:0000161Median cleft lip2SIX3 CL E G H649610889ORPHA:93925Alobar holoprosencephalyHP:0040282 - Frequent32
HP:0410030HP:0100335Non-midline cleft lip2SIX3 CL E G H649610889OMIM:157170Holoprosencephaly 232
HP:0410030HP:0000161Median cleft lip2SIX3 CL E G H649610889OMIM:157170Holoprosencephaly 232
HP:0410030HP:0000161Median cleft lip2SIX3 CL E G H649610889ORPHA:93924Lobar holoprosencephalyHP:0040282 - Frequent32
HP:0410030HP:0000161Median cleft lip2SIX3 CL E G H649610889ORPHA:93926Midline interhemispheric variant of holoprosencephalyHP:0040282 - Frequent32
HP:0410030HP:0000161Median cleft lip2SIX3 CL E G H649610889ORPHA:220386Semilobar holoprosencephalyHP:0040282 - Frequent32
HP:0410030HP:0000161Median cleft lip2SLC2A10 CL E G H8103113444ORPHA:3342Arterial tortuosity syndrome178
HP:0410030HP:0100335Non-midline cleft lip2SMAD4 CL E G H40896770ORPHA:2588Myhre syndrome504
HP:0410030HP:0000161Median cleft lip2SMC1A CL E G H824311111ORPHA:220386Semilobar holoprosencephalyHP:0040282 - Frequent135
HP:0410030HP:0000161Median cleft lip2SMO CL E G H660811119OMIM:241800Hypothalamic hamartomascongenital hypothalamic hamartoma syndrome, included.22
HP:0410030HP:0100335Non-midline cleft lip2SMPD4 CL E G H5562732949OMIM:618622NEURODEVELOPMENTAL DISORDER WITH MICROCEPHALY, ARTHROGRYPOSIS, AND STRUCTURAL BRAIN ANOMALIES; NEDMABA1
HP:0410030HP:0100335Non-midline cleft lip2SPOP CL E G H840511254OMIM:618829NABAIS SA-DE VRIES SYNDROME, TYPE 2; NSDVS216
HP:0410030HP:0000161Median cleft lip2STAG2 CL E G H1073511355ORPHA:93925Alobar holoprosencephalyHP:0040282 - Frequent1
HP:0410030HP:0000161Median cleft lip2STAG2 CL E G H1073511355OMIM:301043HOLOPROSENCEPHALY 13, X-LINKED; HPE131
HP:0410030HP:0000161Median cleft lip2STAG2 CL E G H1073511355ORPHA:220386Semilobar holoprosencephalyHP:0040282 - Frequent1
HP:0410030HP:0000161Median cleft lip2STIL CL E G H649110879ORPHA:93925Alobar holoprosencephalyHP:0040282 - Frequent99
HP:0410030HP:0000161Median cleft lip2STIL CL E G H649110879ORPHA:93924Lobar holoprosencephalyHP:0040282 - Frequent99
HP:0410030HP:0000161Median cleft lip2STIL CL E G H649110879ORPHA:93926Midline interhemispheric variant of holoprosencephalyHP:0040282 - Frequent99
HP:0410030HP:0000161Median cleft lip2STIL CL E G H649110879ORPHA:220386Semilobar holoprosencephalyHP:0040282 - Frequent99
HP:0410030HP:0100335Non-midline cleft lip2SUMO1 CL E G H734112502OMIM:613705Orofacial cleft 108
HP:0410030HP:0100335Non-midline cleft lip2TAPT1 CL E G H20201826887OMIM:616897Osteochondrodysplasia, complex lethal, Symoens-Barnes-Gistelinck type2
HP:0410030HP:0000161Median cleft lip2TCTN3 CL E G H2612324519ORPHA:2753Orofaciodigital syndrome type 4HP:0040281 - Very frequent31
HP:0410030HP:0000161Median cleft lip2TDGF1 CL E G H699711701ORPHA:93925Alobar holoprosencephalyHP:0040282 - Frequent1
HP:0410030HP:0000161Median cleft lip2TDGF1 CL E G H699711701ORPHA:93924Lobar holoprosencephalyHP:0040282 - Frequent1
HP:0410030HP:0000161Median cleft lip2TDGF1 CL E G H699711701ORPHA:93926Midline interhemispheric variant of holoprosencephalyHP:0040282 - Frequent1
HP:0410030HP:0000161Median cleft lip2TDGF1 CL E G H699711701ORPHA:220386Semilobar holoprosencephalyHP:0040282 - Frequent1
HP:0410030HP:0100335Non-midline cleft lip2TFAP2A CL E G H702011742ORPHA:1297Branchio-oculo-facial syndromeHP:0040282 - Frequent12
HP:0410030HP:0000161Median cleft lip2TGIF1 CL E G H705011776ORPHA:93925Alobar holoprosencephalyHP:0040282 - Frequent32
HP:0410030HP:0000161Median cleft lip2TGIF1 CL E G H705011776OMIM:142946Holoprosencephaly 4.32
HP:0410030HP:0000161Median cleft lip2TGIF1 CL E G H705011776ORPHA:93924Lobar holoprosencephalyHP:0040282 - Frequent32
HP:0410030HP:0000161Median cleft lip2TGIF1 CL E G H705011776ORPHA:93926Midline interhemispheric variant of holoprosencephalyHP:0040282 - Frequent32
HP:0410030HP:0000161Median cleft lip2TGIF1 CL E G H705011776ORPHA:220386Semilobar holoprosencephalyHP:0040282 - Frequent32
HP:0410030HP:0100335Non-midline cleft lip2TP63 CL E G H862615979ORPHA:1072Ankyloblepharon filiforme adnatum-cleft palate syndromeHP:0040283 - Occasional140
HP:0410030HP:0100335Non-midline cleft lip2TP63 CL E G H862615979ORPHA:199302Isolated cleft lipHP:0040282 - Frequent140
HP:0410030HP:0000161Median cleft lip2WLS CL E G H7997130238OMIM:619648ZAKI SYNDROME; ZKS
HP:0410030HP:0000161Median cleft lip2WNT5A CL E G H747412784ORPHA:3107Autosomal dominant Robinow syndrome98
HP:0410030HP:0100335Non-midline cleft lip2WNT9B CL E G H748412779ORPHA:1848Renal agenesis, bilateralHP:0040283 - Occasional
HP:0410030HP:0100335Non-midline cleft lip2YAP1 CL E G H1041316262ORPHA:1473Uveal coloboma-cleft lip and palate-intellectual disability2
HP:0410030HP:0000161Median cleft lip2ZIC2 CL E G H754612873ORPHA:93925Alobar holoprosencephalyHP:0040282 - Frequent34
HP:0410030HP:0000161Median cleft lip2ZIC2 CL E G H754612873ORPHA:93924Lobar holoprosencephalyHP:0040282 - Frequent34
HP:0410030HP:0000161Median cleft lip2ZIC2 CL E G H754612873ORPHA:93926Midline interhemispheric variant of holoprosencephalyHP:0040282 - Frequent34
HP:0410030HP:0000161Median cleft lip2ZIC2 CL E G H754612873ORPHA:220386Semilobar holoprosencephalyHP:0040282 - Frequent34
HP:0410030HP:0000161Median cleft lip2ZSWIM6 CL E G H5768829316ORPHA:1827Acromelic frontonasal dysplasiaHP:0040282 - Frequent5
HP:0410030HP:0100336Bilateral cleft lip3CDH1 CL E G H9991748ORPHA:1997Blepharo-cheilo-odontic syndrome1003
HP:0410030HP:0100336Bilateral cleft lip3CHUK CL E G H11471974OMIM:619339BARTSOCAS-PAPAS SYNDROME 2; BPS23
HP:0410030HP:0100336Bilateral cleft lip3CILK1 CL E G H2285821219OMIM:612651ENDOCRINE-CEREBROOSTEODYSPLASIA
HP:0410030HP:0100336Bilateral cleft lip3CTNND1 CL E G H15002515ORPHA:1997Blepharo-cheilo-odontic syndrome
HP:0410030HP:0100336Bilateral cleft lip3DLX4 CL E G H17482917OMIM:616788Orofacial cleft 151
HP:0410030HP:0008501Median cleft lip and palate3DVL1 CL E G H18553084ORPHA:3107Autosomal dominant Robinow syndromeHP:0040282 - Frequent14
HP:0410030HP:0008501Median cleft lip and palate3DVL3 CL E G H18573087ORPHA:3107Autosomal dominant Robinow syndromeHP:0040282 - Frequent5
HP:0410030HP:0008501Median cleft lip and palate3FAM20C CL E G H5697522140ORPHA:1832Lethal osteosclerotic bone dysplasiaHP:0040281 - Very frequent35
HP:0410030HP:0008501Median cleft lip and palate3FOXA2 CL E G H31705022ORPHA:95494Combined pituitary hormone deficiencies, genetic formsHP:0040284 - Very rare
HP:0410030HP:0008501Median cleft lip and palate3FZD2 CL E G H25354040ORPHA:3107Autosomal dominant Robinow syndromeHP:0040282 - Frequent
HP:0410030HP:0100333Unilateral cleft lip3GDF11 CL E G H102204216OMIM:619122VERTEBRAL HYPERSEGMENTATION AND OROFACIAL ANOMALIES; VHO
HP:0410030HP:0008501Median cleft lip and palate3GLI2 CL E G H27364318ORPHA:95494Combined pituitary hormone deficiencies, genetic formsHP:0040284 - Very rare173
HP:0410030HP:0100336Bilateral cleft lip3GLI2 CL E G H27364318OMIM:610829Holoprosencephaly 9173
HP:0410030HP:0034185Median pseudocleft lip3H4C3 CL E G H83644787OMIM:619758TESSADORI-VAN HAAFTEN NEURODEVELOPMENTAL SYNDROME 1; TEVANED1
HP:0410030HP:0008501Median cleft lip and palate3HESX1 CL E G H88204877ORPHA:95494Combined pituitary hormone deficiencies, genetic formsHP:0040284 - Very rare21
HP:0410030HP:0100333Unilateral cleft lip3HYLS1 CL E G H21984426558ORPHA:2189HydrolethalusHP:0040282 - Frequent31
HP:0410030HP:0100336Bilateral cleft lip3IRF6 CL E G H36646121ORPHA:199302Isolated cleft lipHP:0040283 - Occasional99
HP:0410030HP:0100333Unilateral cleft lip3KAT5 CL E G H105245275OMIM:619103NEURODEVELOPMENTAL DISORDER WITH DYSMORPHIC FACIES, SLEEP DISTURBANCE, AND BRAIN ABNORMALITIES; NEDFASB1
HP:0410030HP:0100333Unilateral cleft lip3KIF7 CL E G H37465430497ORPHA:2189HydrolethalusHP:0040282 - Frequent167
HP:0410030HP:0008501Median cleft lip and palate3LHX4 CL E G H8988421734ORPHA:95494Combined pituitary hormone deficiencies, genetic formsHP:0040284 - Very rare43
HP:0410030HP:0100333Unilateral cleft lip3MED12 CL E G H996811957OMIM:301068HARDIKAR SYNDROME; HDKR228
HP:0410030HP:0100336Bilateral cleft lip3MED12 CL E G H996811957OMIM:301068HARDIKAR SYNDROME; HDKR228
HP:0410030HP:0100333Unilateral cleft lip3MID1 CL E G H42817095OMIM:300000Opitz gbbb syndrome, type I57
HP:0410030HP:0100336Bilateral cleft lip3MSX1 CL E G H44877391ORPHA:199302Isolated cleft lipHP:0040283 - Occasional12
HP:0410030HP:0100336Bilateral cleft lip3NECTIN1 CL E G H58189706ORPHA:3253Cleft lip/palate-ectodermal dysplasia syndrome4
HP:0410030HP:0100336Bilateral cleft lip3NECTIN1 CL E G H58189706ORPHA:199302Isolated cleft lipHP:0040283 - Occasional4
HP:0410030HP:0008501Median cleft lip and palate3OTX2 CL E G H50158522ORPHA:95494Combined pituitary hormone deficiencies, genetic formsHP:0040284 - Very rare41
HP:0410030HP:0008501Median cleft lip and palate3POU1F1 CL E G H54499210ORPHA:95494Combined pituitary hormone deficiencies, genetic formsHP:0040284 - Very rare36
HP:0410030HP:0008501Median cleft lip and palate3PROP1 CL E G H56269455ORPHA:95494Combined pituitary hormone deficiencies, genetic formsHP:0040284 - Very rare54
HP:0410030HP:0008501Median cleft lip and palate3PTCH1 CL E G H57279585OMIM:610828Holoprosencephaly 7665
HP:0410030HP:0100336Bilateral cleft lip3PTCH1 CL E G H57279585OMIM:610828Holoprosencephaly 7665
HP:0410030HP:0100336Bilateral cleft lip3RAB5IF CL E G H5596915870OMIM:616994
HP:0410030HP:0100336Bilateral cleft lip3RSPO2 CL E G H34041928583OMIM:618021Tetraamelia syndrome 2.
HP:0410030HP:0100336Bilateral cleft lip3SIX3 CL E G H649610889OMIM:157170Holoprosencephaly 232
HP:0410030HP:0008501Median cleft lip and palate3SIX3 CL E G H649610889OMIM:157170Holoprosencephaly 2.32
HP:0410030HP:0008501Median cleft lip and palate3SLC2A10 CL E G H8103113444ORPHA:3342Arterial tortuosity syndromeHP:0040282 - Frequent178
HP:0410030HP:0100333Unilateral cleft lip3SMAD4 CL E G H40896770ORPHA:2588Myhre syndromeHP:0040283 - Occasional504
HP:0410030HP:0100336Bilateral cleft lip3SMPD4 CL E G H5562732949OMIM:618622NEURODEVELOPMENTAL DISORDER WITH MICROCEPHALY, ARTHROGRYPOSIS, AND STRUCTURAL BRAIN ANOMALIES; NEDMABA1
HP:0410030HP:0100336Bilateral cleft lip3SPOP CL E G H840511254OMIM:618829NABAIS SA-DE VRIES SYNDROME, TYPE 2; NSDVS216
HP:0410030HP:0100333Unilateral cleft lip3SUMO1 CL E G H734112502OMIM:613705Orofacial cleft 10.8
HP:0410030HP:0100333Unilateral cleft lip3TAPT1 CL E G H20201826887OMIM:616897Osteochondrodysplasia, complex lethal, Symoens-Barnes-Gistelinck type2
HP:0410030HP:0008501Median cleft lip and palate3TGIF1 CL E G H705011776OMIM:142946Holoprosencephaly 4.32
HP:0410030HP:0100336Bilateral cleft lip3TP63 CL E G H862615979ORPHA:199302Isolated cleft lipHP:0040283 - Occasional140
HP:0410030HP:0034185Median pseudocleft lip3WLS CL E G H7997130238OMIM:619648ZAKI SYNDROME; ZKS
HP:0410030HP:0008501Median cleft lip and palate3WNT5A CL E G H747412784ORPHA:3107Autosomal dominant Robinow syndromeHP:0040282 - Frequent98
HP:0410030HP:0100336Bilateral cleft lip3YAP1 CL E G H1041316262ORPHA:1473Uveal coloboma-cleft lip and palate-intellectual disability2
HP:0410030HP:0002744Bilateral cleft lip and palate4CDH1 CL E G H9991748ORPHA:1997Blepharo-cheilo-odontic syndromeHP:0040281 - Very frequent1003
HP:0410030HP:0002744Bilateral cleft lip and palate4CHUK CL E G H11471974OMIM:619339BARTSOCAS-PAPAS SYNDROME 2; BPS23
HP:0410030HP:0002744Bilateral cleft lip and palate4CTNND1 CL E G H15002515ORPHA:1997Blepharo-cheilo-odontic syndromeHP:0040281 - Very frequent
HP:0410030HP:0002744Bilateral cleft lip and palate4GLI2 CL E G H27364318OMIM:610829Holoprosencephaly 9173
HP:0410030HP:0002744Bilateral cleft lip and palate4MED12 CL E G H996811957OMIM:301068HARDIKAR SYNDROME; HDKR228
HP:0410030HP:0002744Bilateral cleft lip and palate4NECTIN1 CL E G H58189706ORPHA:3253Cleft lip/palate-ectodermal dysplasia syndromeHP:0040281 - Very frequent4
HP:0410030HP:0002744Bilateral cleft lip and palate4PTCH1 CL E G H57279585OMIM:610828Holoprosencephaly 7665
HP:0410030HP:0002744Bilateral cleft lip and palate4SIX3 CL E G H649610889OMIM:157170Holoprosencephaly 232
HP:0410030HP:0002744Bilateral cleft lip and palate4SPOP CL E G H840511254OMIM:618829NABAIS SA-DE VRIES SYNDROME, TYPE 2; NSDVS216
HP:0410030HP:0002744Bilateral cleft lip and palate4YAP1 CL E G H1041316262ORPHA:1473Uveal coloboma-cleft lip and palate-intellectual disabilityHP:0040282 - Frequent2


Genes (218) :ACTB ADA2 ALX3 ALX4 AMER1 ANKRD17 ARHGAP31 ASXL1 B3GALT6 B3GLCT BCOR BMP4 C2CD3 CC2D2A CCDC32 CDH1 CDON CEP120 CHD7 CHST14 CHUK CILK1 COLEC10 COLEC11 CPLANE1 CPLX1 CTBP1 CTNND1 CYP26C1 DDX3X DDX59 DEAF1 DHODH DISP1 DLL1 DLX4 DSE DVL1 DVL3 DYNC2H1 DYNC2I1 DYNC2I2 DYNC2LI1 EFNB1 EIF2S3 EPG5 ESCO2 EVC EVC2 FAM20C FBXO11 FGD1 FGF20 FGF8 FGFR1 FGFRL1 FKRP FKTN FLII FLNB FLRT3 FOXA2 FOXC2 FOXF1 FOXH1 FRAS1 FREM2 FZD2 GAS1 GATA1 GDF11 GFRA1 GJA1 GLI2 GLI3 GPC3 GPC4 GREB1L GRHL3 GRIP1 H4C3 HESX1 HOXD13 HYLS1 IFT57 IFT80 INTS1 INTU IQSEC2 IRF6 ITGA8 JUP KANSL1 KAT5 KATNIP KIF7 LARGE1 LETM1 LHX4 LMX1B MASP1 MED12 MEIS2 MEOX1 MID1 MSX1 MSX2 MTHFR MYL11 NAA10 NBN NECTIN1 NEK1 NELFA NIPBL NODAL NSD2 NSDHL NSMF NUAK2 NUP107 OCLN OFD1 OTX2 PAX3 PHF8 PHGDH PIGG PIGN PIGV PLCH1 POLR1B POLR1C POLR1D POMT1 POMT2 PORCN POU1F1 PROKR2 PROP1 PTCH1 PTCH2 RAB5IF RAI1 RERE RET RIC1 RIPK4 RPGRIP1L RPL11 RPL15 RPL18 RPL26 RPL27 RPL31 RPL35 RPL35A RPL5 RPS10 RPS15A RPS17 RPS19 RPS20 RPS24 RPS26 RPS27 RPS28 RPS29 RPS7 RSPO2 SEMA3E SF3B2 SF3B4 SHH SIX3 SLC29A3 SLC2A10 SMAD4 SMC1A SMCHD1 SMG9 SMO SMOC1 SMPD4 SPECC1L SPOP STAG2 STIL SUFU SUMO1 TAPT1 TBX2 TCOF1 TCTN2 TCTN3 TDGF1 TFAP2A TFE3 TGDS TGIF1 TMCO1 TP63 TRAPPC9 TRRAP TSR2 TXNL4A UBB VANGL2 VAX1 WDR35 WLS WNT3 WNT4 WNT5A WNT9B YAP1 ZIC2 ZSWIM6

Diseases (202) :OMIM:243310 OMIM:607371 ORPHA:124 OMIM:136760 ORPHA:60015 OMIM:300373 OMIM:619504 OMIM:100300 ORPHA:97297 OMIM:605039 ORPHA:2725 ORPHA:709 OMIM:261540 OMIM:309800 OMIM:600625 OMIM:615948 OMIM:612284 OMIM:619123 ORPHA:1997 OMIM:119580 OMIM:137215 ORPHA:93925 OMIM:614226 ORPHA:93924 ORPHA:93926 ORPHA:220386 OMIM:616300 OMIM:214800 ORPHA:138 OMIM:612370 ORPHA:2953 OMIM:619339 OMIM:612651 OMIM:248340 OMIM:265050 OMIM:277170 OMIM:194190 ORPHA:280 ORPHA:398189 OMIM:300958 ORPHA:2919 OMIM:174300 ORPHA:819 ORPHA:246 OMIM:263750 OMIM:616788 ORPHA:3107 OMIM:616894 OMIM:613091 ORPHA:93271 OMIM:617088 OMIM:304110 OMIM:300148 OMIM:242840 OMIM:216100 OMIM:268300 ORPHA:3103 OMIM:225500 ORPHA:1832 OMIM:618089 OMIM:305400 ORPHA:915 ORPHA:1848 OMIM:612702 ORPHA:2117 OMIM:615465 OMIM:147950 OMIM:236670 OMIM:150250 OMIM:615271 ORPHA:95494 ORPHA:33001 OMIM:153400 OMIM:265380 OMIM:219000 ORPHA:2052 OMIM:619122 ORPHA:2710 OMIM:164200 OMIM:615849 OMIM:610829 ORPHA:672 OMIM:146510 ORPHA:373 OMIM:312870 ORPHA:99771 ORPHA:888 OMIM:606713 OMIM:619758 ORPHA:887 ORPHA:2189 OMIM:236680 OMIM:617927 OMIM:618571 OMIM:617926 OMIM:617925 ORPHA:1300 ORPHA:199302 OMIM:608864 OMIM:119500 OMIM:119300 ORPHA:34217 OMIM:610443 OMIM:619103 OMIM:616784 OMIM:200990 OMIM:161200 OMIM:257920 OMIM:301068 OMIM:305450 OMIM:600987 OMIM:214300 ORPHA:2745 OMIM:300000 OMIM:608874 OMIM:168500 ORPHA:563609 OMIM:619110 ORPHA:647 OMIM:251260 OMIM:225060 ORPHA:3253 ORPHA:2751 OMIM:263520 OMIM:122470 OMIM:308050 OMIM:614838 OMIM:619452 OMIM:618348 OMIM:616730 OMIM:251290 OMIM:311200 ORPHA:2750 ORPHA:894 OMIM:300263 ORPHA:85287 OMIM:256520 ORPHA:2059 OMIM:239300 OMIM:619895 ORPHA:861 OMIM:613150 OMIM:305600 OMIM:244200 OMIM:109400 OMIM:610828 OMIM:616994 OMIM:616975 OMIM:618761 ORPHA:1234 OMIM:263650 OMIM:611561 OMIM:612561 OMIM:105650 OMIM:618021 OMIM:164210 OMIM:154400 ORPHA:245 OMIM:142945 OMIM:147250 OMIM:157170 ORPHA:168569 ORPHA:3342 OMIM:139210 ORPHA:2588 OMIM:603457 OMIM:616920 OMIM:241800 ORPHA:1106 OMIM:206920 OMIM:618622 OMIM:600251 OMIM:618829 OMIM:301043 OMIM:301022 OMIM:613705 OMIM:616897 OMIM:618223 OMIM:613885 ORPHA:2753 ORPHA:1297 OMIM:113620 OMIM:301066 OMIM:616145 OMIM:142946 ORPHA:1394 OMIM:213980 ORPHA:1072 OMIM:106260 ORPHA:69085 OMIM:129400 OMIM:613192 OMIM:618454 OMIM:608572 OMIM:614402 OMIM:619648 OMIM:273395 OMIM:611812 OMIM:120433 ORPHA:1473 OMIM:603671 ORPHA:1827
 

Human Phenotype Ontology(HPO) is developed by the Human Phenotype Ontology Consortium. The version used here is December 15 2022 release.