Variation_Name | GeneID | GeneSymbol | ClinicalSignificance | dbSNP | RCVaccession | TestedInGTR | PhenotypeIDs | Chromosome | Start | Stop | HGVS_c | HGVS_p | HGVS_g | OtherIDs | Disease_ClinVar | Disease_hgmd | NM_000487.5(ARSA):c.*96A>G | 410 | ARSA | Pathogenic | 6151429 | RCV000003190; RCV000020309; RCV000180167; | N | MedGen:C0023522,OMIM:250100,SNOMED CT:396338004; MedGen:CN068604; MedGen:CN221809 | 22 | 51063477 | 51063477 | NM_000487.5:c.*96A>G | | NC_000022.10:g.51063477T>C | OMIM Allelic Variant:607574.0001 | CN068604 Arylsulfatase A pseudodeficiency; C0023522 250100 Metachromatic leukodystrophy; CN221809 not provided | | |
NM_000487.5(ARSA):c.1489_1492dupCCCC (p.Arg498Profs) | 410 | ARSA | Likely pathogenic | 774153480 | RCV000169193; | N | MedGen:C0023522,OMIM:250100,SNOMED CT:396338004 | 22 | 51063611 | 51063614 | NM_000487.5:c.1489_1492dupCCCC | NP_000478.3:p.Arg498Profs | NC_000022.10:g.51063611_51063614dupGGGG | - | C0023522 250100 Metachromatic leukodystrophy | | |
NM_000487.5(ARSA):c.1408_1418delGCAGCTGTGAC (p.Ala470Leufs) | 410 | ARSA | Pathogenic | 80338823 | RCV000180166; | N | MedGen:C0023522,OMIM:250100,SNOMED CT:396338004 | 22 | 51063685 | 51063695 | NM_000487.5:c.1408_1418delGCAGCTGTGAC | NP_000478.3:p.Ala470Leufs | NC_000022.10:g.51063685_51063695delGTCACAGCTGC | - | C0023522 250100 Metachromatic leukodystrophy | | |
NM_000487.5(ARSA):c.1283C>T (p.Pro428Leu) | 410 | ARSA | Pathogenic | 28940893 | RCV000003195; RCV000003197; RCV000003196; RCV000020314; | N | ; MedGen:C0023522,OMIM:250100,SNOMED CT:396338004; MedGen:C0751276,ORPHA:309263,SNOMED CT:44359008; MedGen:C0751279,ORPHA:309271,SNOMED CT:24326000 | 22 | 51063820 | 51063820 | NM_000487.5:c.1283C>T | NP_000478.3:p.Pro428Leu | NC_000022.10:g.51063820G>A | HGMD:CM940113,OMIM Allelic Variant:607574.0004 | C0023522 250100 Metachromatic leukodystrophy; C0751279 Metachromatic leukodystrophy, adult type; C0751276 Metachromatic leukodystrophy, juvenile type | | |
NM_000487.5(ARSA):c.1232C>T (p.Thr411Ile) | 410 | ARSA | Pathogenic | 74315481 | RCV000020313; RCV000003233; | N | MedGen:C0023522,OMIM:250100,SNOMED CT:396338004; MedGen:C4017847 | 22 | 51063871 | 51063871 | NM_000487.5:c.1232C>T | NP_000478.3:p.Thr411Ile | NC_000022.10:g.51063871G>A | OMIM Allelic Variant:607574.0039 | C0023522 250100 Metachromatic leukodystrophy; C4017847 Metachromatic leukodystrophy, mild | | |
NM_000487.5(ARSA):c.1223_1231delGTGATACCA (p.Ser408_Thr410del) | 410 | ARSA | Likely pathogenic | 765905826 | RCV000169598; | N | MedGen:C0023522,OMIM:250100,SNOMED CT:396338004 | 22 | 51063872 | 51063880 | NM_000487.5:c.1223_1231delGTGATACCA | NP_000478.3:p.Ser408_Thr410del | NC_000022.10:g.51063872_51063880delTGGTATCAC | - | C0023522 250100 Metachromatic leukodystrophy | | |
NM_000487.5(ARSA):c.1210+1G>A | 410 | ARSA | Pathogenic | 80338820 | RCV000003204; RCV000020312; | N | MedGen:C0023522,OMIM:250100,SNOMED CT:396338004; MedGen:C0751276,ORPHA:309263,SNOMED CT:44359008 | 22 | 51064006 | 51064006 | NM_000487.5:c.1210+1G>A | | NC_000022.10:g.51064006C>T | OMIM Allelic Variant:607574.0009 | C0023522 250100 Metachromatic leukodystrophy; C0751276 Metachromatic leukodystrophy, juvenile type | | |
NM_000487.5(ARSA):c.1178C>G (p.Thr393Ser) | 410 | ARSA | Benign;Pathogenic | 743616 | RCV000020311; RCV000078937; | N | MedGen:C0023522,OMIM:250100,SNOMED CT:396338004; MedGen:CN169374 | 22 | 51064039 | 51064039 | NM_000487.5:c.1178C>G | NP_000478.3:p.Thr393Ser | NC_000022.10:g.51064039G>C | HGMD:CM910052 | C0023522 250100 Metachromatic leukodystrophy; CN169374 not specified | | |
NM_000487.5(ARSA):c.1175G>A (p.Arg392Gln) | 410 | ARSA | Likely pathogenic | 199476391 | RCV000150058; RCV000058946; | N | MedGen:C0023522,OMIM:250100,SNOMED CT:396338004; MedGen:CN221809 | 22 | 51064042 | 51064042 | NM_000487.5:c.1175G>A | NP_000478.3:p.Arg392Gln | NC_000022.10:g.51064042C>T | HGMD:CM980120,UniProtKB (variants):VAR_007285 | C0023522 250100 Metachromatic leukodystrophy; CN221809 not provided | | |
NM_000487.5(ARSA):c.1174C>T (p.Arg392Trp) | 410 | ARSA | Likely pathogenic;Pathogenic | 74315480 | RCV000003231; | N | MedGen:C0023522,OMIM:250100,SNOMED CT:396338004 | 22 | 51064043 | 51064043 | NM_000487.5:c.1174C>T | NP_000478.3:p.Arg392Trp | NC_000022.10:g.51064043G>A | OMIM Allelic Variant:607574.0037 | C0023522 250100 Metachromatic leukodystrophy | | |
NM_000487.5(ARSA):c.1150G>A (p.Glu384Lys) | 410 | ARSA | Pathogenic | 74315479 | RCV000078936; RCV000003230; | N | MedGen:C0023522,OMIM:250100,SNOMED CT:396338004; MedGen:C4017096 | 22 | 51064067 | 51064067 | NM_000487.5:c.1150G>A | NP_000478.3:p.Glu384Lys | NC_000022.10:g.51064067C>T | HGMD:CM930045,OMIM Allelic Variant:607574.0036 | C4017096 Arylsulfatase a pseudodeficiency, intermediate; C0023522 250100 Metachromatic leukodystrophy | | |
NM_000487.5(ARSA):c.1125_1126delCT (p.Phe376Leufs) | 410 | ARSA | Pathogenic | 398123412 | RCV000078934; | N | MedGen:C0023522,OMIM:250100,SNOMED CT:396338004 | 22 | 51064091 | 51064092 | NM_000487.5:c.1125_1126delCT | NP_000478.3:p.Phe376Leufs | NC_000022.10:g.51064091_51064092delAG | - | C0023522 250100 Metachromatic leukodystrophy | | |
NM_000487.5(ARSA):c.1114C>T (p.Arg372Trp) | 410 | ARSA | Pathogenic | 74315476 | RCV000003227; RCV000078933; | N | MedGen:C0023522,OMIM:250100,SNOMED CT:396338004; MedGen:C4017094 | 22 | 51064103 | 51064103 | NM_000487.5:c.1114C>T | NP_000478.3:p.Arg372Trp | NC_000022.10:g.51064103G>A | HGMD:CM940109,OMIM Allelic Variant:607574.0033 | C0023522 250100 Metachromatic leukodystrophy; C4017094 Metachromatic leukodystrophy, severe | | |
NM_000487.5(ARSA):c.1108-2A>G | 410 | ARSA | Pathogenic | 398123411 | RCV000078932; | N | MedGen:C0023522,OMIM:250100,SNOMED CT:396338004 | 22 | 51064111 | 51064111 | NM_000487.5:c.1108-2A>G | | NC_000022.10:g.51064111T>C | - | C0023522 250100 Metachromatic leukodystrophy | | |
NM_000487.5(ARSA):c.1055A>G (p.Asn352Ser) | 410 | ARSA | Benign;Pathogenic | 2071421 | RCV000003191; RCV000020310; RCV000078931; | N | ; MedGen:C0023522,OMIM:250100,SNOMED CT:396338004; MedGen:CN221809 | 22 | 51064416 | 51064416 | NM_000487.5:c.1055A>G | NP_000478.3:p.Asn352Ser | NC_000022.10:g.51064416T>C | HGMD:CM890013,OMIM Allelic Variant:607574.0002 | C0023522 250100 Metachromatic leukodystrophy; CN221809 not provided | | |
NM_000487.5(ARSA):c.1010A>T (p.Asp337Val) | 410 | ARSA | Likely pathogenic;Pathogenic | 74315475 | RCV000003226; RCV000169024; | N | MedGen:C0023522,OMIM:250100,SNOMED CT:396338004; MedGen:C4017094 | 22 | 51064461 | 51064461 | NM_000487.5:c.1010A>T | NP_000478.3:p.Asp337Val | NC_000022.10:g.51064461T>A | OMIM Allelic Variant:607574.0032 | C0023522 250100 Metachromatic leukodystrophy; C4017094 Metachromatic leukodystrophy, severe | | |
NM_000487.5(ARSA):c.991G>T (p.Glu331Ter) | 410 | ARSA | Pathogenic | 398123419 | RCV000078953; | N | MedGen:C0023522,OMIM:250100,SNOMED CT:396338004 | 22 | 51064480 | 51064480 | NM_000487.5:c.991G>T | NP_000478.3:p.Glu331Ter | NC_000022.10:g.51064480C>A | HGMD:CM065973 | C0023522 250100 Metachromatic leukodystrophy | | |
NM_000487.5(ARSA):c.986C>T (p.Thr329Ile) | 410 | ARSA | Pathogenic | 398123418 | RCV000078952; | N | MedGen:C0023522,OMIM:250100,SNOMED CT:396338004 | 22 | 51064485 | 51064485 | NM_000487.5:c.986C>T | NP_000478.3:p.Thr329Ile | NC_000022.10:g.51064485G>A | HGMD:CM990184 | C0023522 250100 Metachromatic leukodystrophy | | |
NM_000487.5(ARSA):c.979+1G>A | 410 | ARSA | Likely pathogenic | 754722529 | RCV000169323; | N | MedGen:C0023522,OMIM:250100,SNOMED CT:396338004 | 22 | 51064581 | 51064581 | NM_000487.5:c.979+1G>A | | NC_000022.10:g.51064581C>T | - | C0023522 250100 Metachromatic leukodystrophy | | |
NM_000487.5(ARSA):c.899T>C (p.Leu300Ser) | 410 | ARSA | Pathogenic | 199476389 | RCV000150059; RCV000058988; | N | MedGen:C0023522,OMIM:250100,SNOMED CT:396338004; MedGen:CN221809 | 22 | 51064662 | 51064662 | NM_000487.5:c.899T>C | NP_000478.3:p.Leu300Ser | NC_000022.10:g.51064662A>G | HGMD:CM980119,UniProtKB (variants):VAR_054196 | C0023522 250100 Metachromatic leukodystrophy; CN221809 not provided | | |
NM_000487.5(ARSA):c.883G>A (p.Gly295Ser) | 410 | ARSA | Pathogenic | 199476349 | RCV000150060; RCV000058985; | N | MedGen:C0023522,OMIM:250100,SNOMED CT:396338004; MedGen:CN221809 | 22 | 51064678 | 51064678 | NM_000487.5:c.883G>A | NP_000478.3:p.Gly295Ser | NC_000022.10:g.51064678C>T | HGMD:CM042300,UniProtKB (variants):VAR_054194 | C0023522 250100 Metachromatic leukodystrophy; CN221809 not provided | | |
NM_000487.5(ARSA):c.868C>T (p.Arg290Cys) | 410 | ARSA | Pathogenic | 74315473 | RCV000003223; | N | MedGen:C0023522,OMIM:250100,SNOMED CT:396338004 | 22 | 51064693 | 51064693 | NM_000487.5:c.868C>T | NP_000478.3:p.Arg290Cys | NC_000022.10:g.51064693G>A | OMIM Allelic Variant:607574.0029 | C0023522 250100 Metachromatic leukodystrophy | | |
NM_000487.5(ARSA):c.827C>T (p.Thr276Met) | 410 | ARSA | Likely pathogenic;Pathogenic | 74315472 | RCV000003221; RCV000169246; | N | MedGen:C0023522,OMIM:250100,SNOMED CT:396338004; MedGen:C4017094 | 22 | 51065046 | 51065046 | NM_000487.5:c.827C>T | NP_000478.3:p.Thr276Met | NC_000022.10:g.51065046G>A | OMIM Allelic Variant:607574.0027 | C0023522 250100 Metachromatic leukodystrophy; C4017094 Metachromatic leukodystrophy, severe | | |
NM_000487.5(ARSA):c.769G>C (p.Asp257His) | 410 | ARSA | Pathogenic | 80338819 | RCV000020322; | N | MedGen:C0023522,OMIM:250100,SNOMED CT:396338004 | 22 | 51065104 | 51065104 | NM_000487.5:c.769G>C | NP_000478.3:p.Asp257His | NC_000022.10:g.51065104C>G | - | C0023522 250100 Metachromatic leukodystrophy | | |
NM_000487.5(ARSA):c.763G>A (p.Glu255Lys) | 410 | ARSA | Likely pathogenic;Pathogenic | 74315483 | RCV000003237; RCV000169048; | N | MedGen:C0023522,OMIM:250100,SNOMED CT:396338004; MedGen:C0751278 | 22 | 51065110 | 51065110 | NM_000487.5:c.763G>A | NP_000478.3:p.Glu255Lys | NC_000022.10:g.51065110C>T | OMIM Allelic Variant:607574.0044 | C0023522 250100 Metachromatic leukodystrophy; C0751278 Metachromatic leukodystrophy, late infantile | | |
NM_000487.5(ARSA):c.739G>A (p.Gly247Arg) | 410 | ARSA | Pathogenic | 74315471 | RCV000003220; RCV000020321; | N | MedGen:C0023522,OMIM:250100,SNOMED CT:396338004; MedGen:C4017094 | 22 | 51065134 | 51065134 | NM_000487.5:c.739G>A | NP_000478.3:p.Gly247Arg | NC_000022.10:g.51065134C>T | OMIM Allelic Variant:607574.0026 | C0023522 250100 Metachromatic leukodystrophy; C4017094 Metachromatic leukodystrophy, severe | | |
NM_000487.5(ARSA):c.737G>A (p.Arg246His) | 410 | ARSA | Pathogenic | 199476366 | RCV000150061; RCV000058979; | N | MedGen:C0023522,OMIM:250100,SNOMED CT:396338004; MedGen:CN221809 | 22 | 51065136 | 51065136 | NM_000487.5:c.737G>A | NP_000478.3:p.Arg246His | NC_000022.10:g.51065136C>T | HGMD:CM970112,UniProtKB (variants):VAR_007268 | C0023522 250100 Metachromatic leukodystrophy; CN221809 not provided | | |
NM_000487.5(ARSA):c.736C>T (p.Arg246Cys) | 410 | ARSA | Likely pathogenic;Pathogenic | 74315470 | RCV000003219; | N | MedGen:C0023522,OMIM:250100,SNOMED CT:396338004 | 22 | 51065137 | 51065137 | NM_000487.5:c.736C>T | NP_000478.3:p.Arg246Cys | NC_000022.10:g.51065137G>A | OMIM Allelic Variant:607574.0025 | C0023522 250100 Metachromatic leukodystrophy | | |
NM_000487.5(ARSA):c.697C>A (p.Pro233Thr) | 410 | ARSA | Pathogenic | 74315469 | RCV000003218; | N | MedGen:C0023522,OMIM:250100,SNOMED CT:396338004 | 22 | 51065176 | 51065176 | NM_000487.5:c.697C>A | NP_000478.3:p.Pro233Thr | NC_000022.10:g.51065176G>T | OMIM Allelic Variant:607574.0024 | C0023522 250100 Metachromatic leukodystrophy | | |
NM_000487.5(ARSA):c.677C>T (p.Ala226Val) | 410 | ARSA | Pathogenic | 74315468 | RCV000003217; | N | MedGen:C0023522,OMIM:250100,SNOMED CT:396338004 | 22 | 51065269 | 51065269 | NM_000487.5:c.677C>T | NP_000478.3:p.Ala226Val | NC_000022.10:g.51065269G>A | OMIM Allelic Variant:607574.0023 | C0023522 250100 Metachromatic leukodystrophy | | |
NM_000487.5(ARSA):c.641C>T (p.Ala214Val) | 410 | ARSA | Pathogenic | 74315467 | RCV000003216; | N | MedGen:C0023522,OMIM:250100,SNOMED CT:396338004 | 22 | 51065305 | 51065305 | NM_000487.5:c.641C>T | NP_000478.3:p.Ala214Val | NC_000022.10:g.51065305G>A | OMIM Allelic Variant:607574.0022 | C0023522 250100 Metachromatic leukodystrophy | | |
NM_000487.5(ARSA):c.583delT (p.Trp195Glyfs) | 410 | ARSA | Pathogenic | 398123416 | RCV000078948; | N | MedGen:C0023522,OMIM:250100,SNOMED CT:396338004 | 22 | 51065363 | 51065363 | NM_000487.5:c.583delT | NP_000478.3:p.Trp195Glyfs | NC_000022.10:g.51065363delA | - | C0023522 250100 Metachromatic leukodystrophy | | |
NM_000487.5(ARSA):c.542T>G (p.Ile181Ser) | 410 | ARSA | Pathogenic | 74315457 | RCV000003202; RCV000003203; RCV000020320; | N | MedGen:C0023522,OMIM:250100,SNOMED CT:396338004; MedGen:C0751276,ORPHA:309263,SNOMED CT:44359008; MedGen:C0751279,ORPHA:309271,SNOMED CT:24326000 | 22 | 51065404 | 51065404 | NM_000487.5:c.542T>G | NP_000478.3:p.Ile181Ser | NC_000022.10:g.51065404A>C | OMIM Allelic Variant:607574.0008,OMIM Allelic Variant:607574.0041 | C0023522 250100 Metachromatic leukodystrophy; C0751279 Metachromatic leukodystrophy, adult type; C0751276 Metachromatic leukodystrophy, juvenile type | | |
NM_000487.5(ARSA):c.506C>G (p.Pro169Arg) | 410 | ARSA | Pathogenic | 74315465 | RCV000003214; | N | MedGen:C0023522,OMIM:250100,SNOMED CT:396338004 | 22 | 51065440 | 51065440 | NM_000487.5:c.506C>G | NP_000478.3:p.Pro169Arg | NC_000022.10:g.51065440G>C | OMIM Allelic Variant:607574.0020 | C0023522 250100 Metachromatic leukodystrophy | | |
NM_000487.5(ARSA):c.467G>A (p.Gly156Asp) | 410 | ARSA | Pathogenic | 74315463 | RCV000003212; | N | MedGen:C0023522,OMIM:250100,SNOMED CT:396338004 | 22 | 51065479 | 51065479 | NM_000487.5:c.467G>A | NP_000478.3:p.Gly156Asp | NC_000022.10:g.51065479C>T | OMIM Allelic Variant:607574.0018 | C0023522 250100 Metachromatic leukodystrophy | | |
NM_000487.5(ARSA):c.465+1G>A | 410 | ARSA | Pathogenic | 80338815 | RCV000003192; RCV000003194; RCV000020319; | N | MedGen:C0023522,OMIM:250100,SNOMED CT:396338004; MedGen:C0751276,ORPHA:309263,SNOMED CT:44359008; MedGen:C0751279,ORPHA:309271,SNOMED CT:24326000 | 22 | 51065593 | 51065593 | NM_000487.5:c.465+1G>A | | NC_000022.10:g.51065593C>T | HGMD:CS910416,OMIM Allelic Variant:607574.0003 | C0023522 250100 Metachromatic leukodystrophy; C0751279 Metachromatic leukodystrophy, adult type; C0751276 Metachromatic leukodystrophy, juvenile type | | |
NM_000487.5(ARSA):c.370G>A (p.Gly124Ser) | 410 | ARSA | Pathogenic;Uncertain significance | 74315461 | RCV000003209; RCV000078945; | N | MedGen:C0023522,OMIM:250100,SNOMED CT:396338004; MedGen:CN221809 | 22 | 51065689 | 51065689 | NM_000487.5:c.370G>A | NP_000478.3:p.Gly124Ser | NC_000022.10:g.51065689C>T | HGMD:CM940098,OMIM Allelic Variant:607574.0015 | C0023522 250100 Metachromatic leukodystrophy; CN221809 not provided | | |
NM_000487.5(ARSA):c.304delC (p.Leu102Cysfs) | 410 | ARSA | Likely pathogenic | 786204673 | RCV000169476; | N | MedGen:C0023522,OMIM:250100,SNOMED CT:396338004 | 22 | 51065755 | 51065755 | NM_000487.5:c.304delC | NP_000478.3:p.Leu102Cysfs | NC_000022.10:g.51065755delG | - | C0023522 250100 Metachromatic leukodystrophy | | |
NM_000487.5(ARSA):c.302G>A (p.Gly101Asp) | 410 | ARSA | Pathogenic | 74315455 | RCV000003198; RCV000020318; | N | MedGen:C0023522,OMIM:250100,SNOMED CT:396338004; MedGen:C0751279,ORPHA:309271,SNOMED CT:24326000 | 22 | 51065757 | 51065757 | NM_000487.5:c.302G>A | NP_000478.3:p.Gly101Asp | NC_000022.10:g.51065757C>A,NC_000022.10:g.51065757C>T | OMIM Allelic Variant:607574.0005 | C0023522 250100 Metachromatic leukodystrophy; C0751279 Metachromatic leukodystrophy, adult type | | |
NM_000487.5(ARSA):c.293C>T (p.Ser98Phe) | 410 | ARSA | Likely pathogenic;Pathogenic | 74315456 | RCV000003199; RCV000020317; | N | MedGen:C0023522,OMIM:250100,SNOMED CT:396338004; MedGen:C0751278 | 22 | 51065766 | 51065766 | NM_000487.5:c.293C>T | NP_000478.3:p.Ser98Phe | NC_000022.10:g.51065766G>A | HGMD:CM910049,OMIM Allelic Variant:607574.0006 | C0023522 250100 Metachromatic leukodystrophy; C0751278 Metachromatic leukodystrophy, late infantile | | |
NM_000487.5(ARSA):c.257G>A (p.Arg86Gln) | 410 | ARSA | Pathogenic | 74315458 | RCV000003205; RCV000020316; | N | MedGen:C0023522,OMIM:250100,SNOMED CT:396338004; MedGen:C4017093 | 22 | 51065802 | 51065802 | NM_000487.5:c.257G>A | NP_000478.3:p.Arg86Gln | NC_000022.10:g.51065802C>T | OMIM Allelic Variant:607574.0010 | C0023522 250100 Metachromatic leukodystrophy; C4017093 Metachromatic leukodystrophy, late-onset | | |
NM_000487.5(ARSA):c.240dupC (p.Gly81Argfs) | 410 | ARSA | Likely pathogenic | 786204599 | RCV000169355; | N | MedGen:C0023522,OMIM:250100,SNOMED CT:396338004 | 22 | 51065819 | 51065819 | NM_000487.5:c.240dupC | NP_000478.3:p.Gly81Argfs | NC_000022.10:g.51065819dupG | - | C0023522 250100 Metachromatic leukodystrophy | | |
NM_000487.5(ARSA):c.195delC (p.Tyr65Terfs) | 410 | ARSA | Pathogenic | 398123414 | RCV000078942; | N | MedGen:C0023522,OMIM:250100,SNOMED CT:396338004 | 22 | 51066013 | 51066013 | NM_000487.5:c.195delC | NP_000478.3:p.Tyr65Terfs | NC_000022.10:g.51066013delG | - | C0023522 250100 Metachromatic leukodystrophy | | |
NM_000487.5(ARSA):c.34delG (p.Ala12Profs) | 410 | ARSA | Pathogenic | 398123415 | RCV000078944; | N | MedGen:C0023522,OMIM:250100,SNOMED CT:396338004 | 22 | 51066174 | 51066174 | NM_000487.5:c.34delG | NP_000478.3:p.Ala12Profs | NC_000022.10:g.51066174delC | - | C0023522 250100 Metachromatic leukodystrophy | | |