Human Phenotype Ontology

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Examples Gene: MT-ND1, POLG, Region: M:1-1000 Variant: m.8993T>G, 1:g.10042757T>C rs3888511 MSCV_0000006, ClinVar: RCV000000015, Disease: Leigh syndrome, Phenotype: Retinopathy

Grandparent Node:
Abnormal gastric mucosa morphology (HP:0004295)

Parent Node:
Gastritis (HP:0005263)

..Starting node
..Chronic gastritis (HP:0005231)

Term ID:

5231

Name:

Chronic gastritis

Synonym:

Definition:

A chronic form of gastritis.

Comments:

Reference:

HP:0005231

Genes and Diseases:

Child Nodes:

........

Chronic atrophic gastritis (HP:0002582)

Sister Nodes:

Eosinophilic infiltration in the stomach mucosa (HP:0410147)

Giant hypertrophic gastritis (HP:0005246)

Input	HPO ID	HPO term	Distance	Gene	Gene id entrez	HGNC ID	DiseaseId	DiseaseName	ClinVar variants
HPO disease - gene - phenotype typical associations:
HPO disease - gene - phenotype less frequent non-typical associations:
HP:0005231	HP:0005231	Chronic gastritis	0	ELF4 CL E G H	2000	3319	OMIM:301074	AUTOINFLAMMATORY SYNDROME, FAMILIAL, X-LINKED, BEHCET-LIKE 2; AIFBL2	1
HP:0005231	HP:0005231	Chronic gastritis	0	FOCAD CL E G H	54914	23377	OMIM:619991		3
HP:0005231	HP:0005231	Chronic gastritis	0	IGHG2 CL E G H	3501	5526	ORPHA:183675	Recurrent infections associated with rare immunoglobulin isotypes deficiency	1
HP:0005231	HP:0005231	Chronic gastritis	0	IGKC CL E G H	3514	5716	ORPHA:183675	Recurrent infections associated with rare immunoglobulin isotypes deficiency	5
HP:0005231	HP:0005231	Chronic gastritis	0	IPO8 CL E G H	10526	9853	OMIM:619472	VISS syndrome

Genes (5) :ELF4 FOCAD IGHG2 IGKC IPO8

Diseases (4) :OMIM:301074 OMIM:619991 ORPHA:183675 OMIM:619472

Human Phenotype Ontology(HPO) is developed by the Human Phenotype Ontology Consortium. The version used here is December 15 2022 release.