Human Phenotype Ontology 
Grandparent Node:
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Abnormality of male external genitalia (HP:0000032)help
Grandparent Node:
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Abnormality of the lower urinary tract (HP:0010936)help
Parent Node:
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Abnormality of the urethra (HP:0000795)help
..Starting node
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Urethral atresia (HP:0000068)help
Term ID: 68
Name: Urethral atresia
Synonym: Absent urethral opening; Urethral opening absent
Definition: Congenital anomaly characterized by closure or failure to develop an opening in the urethra.
Comments:
Reference: HP:0000068
Genes and Diseases:
 
       Child Nodes:
........expandUrethral atresia, male (HP:0000052) help
........expandUrethral atresia, female (HP:0000067) help

 Sister Nodes: 
..expandCongenital megalourethra (HP:0030723) help
..expandDisplacement of the urethral meatus (HP:0100627) help
..expandDistal urethral duplication (HP:0008706) help
..expandNeoplasm of the urethra (HP:0100517) help
..expandPatulous urethra (HP:0025417) help
..expandUrethral diverticulum (HP:0008722) help
..expandUrethral fistula (HP:0010480) help
..expandUrethral obstruction (HP:0000796) help
..expandUrethritis (HP:0500006) help
..expandUrethrocele (HP:0100821) help
..expandUrogenital sinus anomaly (HP:0100779) help
InputHPO IDHPO termDistanceGeneGene id entrezHGNC IDDiseaseIdDiseaseNameFrequencyOnsetHGMD variantsClinVar variants
 
HPO disease - gene - phenotype typical associations:
 
HPO disease - gene - phenotype less frequent non-typical associations:
HP:0000068HP:0000068Urethral atresia0B9D1 CL E G H2707724123ORPHA:564Meckel syndromeHP:0040283 - Occasional28
HP:0000068HP:0000068Urethral atresia0B9D2 CL E G H8077628636ORPHA:564Meckel syndromeHP:0040283 - Occasional34
HP:0000068HP:0000068Urethral atresia0CC2D2A CL E G H5754529253ORPHA:564Meckel syndromeHP:0040283 - Occasional247
HP:0000068HP:0000068Urethral atresia0CEP290 CL E G H8018429021ORPHA:564Meckel syndromeHP:0040283 - Occasional342
HP:0000068HP:0000068Urethral atresia0CSPP1 CL E G H7984826193ORPHA:564Meckel syndromeHP:0040283 - Occasional57
HP:0000068HP:0000068Urethral atresia0FANCB CL E G H21873583OMIM:314390VACTERL association, X-linked.58
HP:0000068HP:0000068Urethral atresia0FRAS1 CL E G H8014419185ORPHA:2052Fraser syndromeHP:0040283 - Occasional353
HP:0000068HP:0000068Urethral atresia0FREM2 CL E G H34164025396ORPHA:2052Fraser syndromeHP:0040283 - Occasional263
HP:0000068HP:0000068Urethral atresia0GRIP1 CL E G H2342618708ORPHA:2052Fraser syndromeHP:0040283 - Occasional80
HP:0000068HP:0000068Urethral atresia0MKS1 CL E G H549037121ORPHA:564Meckel syndromeHP:0040283 - Occasional127
HP:0000068HP:0000068Urethral atresia0RPGRIP1 CL E G H5709613436ORPHA:564Meckel syndromeHP:0040283 - Occasional109
HP:0000068HP:0000068Urethral atresia0RPGRIP1L CL E G H2332229168ORPHA:564Meckel syndromeHP:0040283 - Occasional167
HP:0000068HP:0000068Urethral atresia0TCTN1 CL E G H7960026113ORPHA:564Meckel syndromeHP:0040283 - Occasional45
HP:0000068HP:0000068Urethral atresia0TCTN2 CL E G H7986725774ORPHA:564Meckel syndromeHP:0040283 - Occasional76
HP:0000068HP:0000068Urethral atresia0TCTN3 CL E G H2612324519ORPHA:564Meckel syndromeHP:0040283 - Occasional31
HP:0000068HP:0000068Urethral atresia0TMEM107 CL E G H8431428128ORPHA:564Meckel syndromeHP:0040283 - Occasional4
HP:0000068HP:0000068Urethral atresia0TMEM216 CL E G H5125925018ORPHA:564Meckel syndromeHP:0040283 - Occasional45
HP:0000068HP:0000068Urethral atresia0TMEM231 CL E G H7958337234ORPHA:564Meckel syndromeHP:0040283 - Occasional33
HP:0000068HP:0000068Urethral atresia0TMEM237 CL E G H6506214432ORPHA:564Meckel syndromeHP:0040283 - Occasional82
HP:0000068HP:0000068Urethral atresia0TMEM67 CL E G H9114728396ORPHA:564Meckel syndromeHP:0040283 - Occasional166
HP:0000068HP:0000068Urethral atresia0TP63 CL E G H862615979ORPHA:1896EEC syndromeHP:0040282 - Frequent140
HP:0000068HP:0000068Urethral atresia0TXNDC15 CL E G H7977020652ORPHA:564Meckel syndromeHP:0040283 - Occasional2
HP:0000068HP:0000068Urethral atresia0WNT3 CL E G H747312782OMIM:273395Tetraamelia, autosomal recessive.12
HP:0000068HP:0000068Urethral atresia0ZIC3 CL E G H754712874OMIM:314390VACTERL association, X-linked.39
HP:0000068HP:0000067Urethral atresia, female1 CL E G H
HP:0000068HP:0000052Urethral atresia, male1 CL E G H


Genes (24) :B9D1 B9D2 CC2D2A CEP290 CSPP1 FANCB FRAS1 FREM2 GRIP1 MKS1 RPGRIP1 RPGRIP1L TCTN1 TCTN2 TCTN3 TMEM107 TMEM216 TMEM231 TMEM237 TMEM67 TP63 TXNDC15 WNT3 ZIC3

Diseases (5) :ORPHA:564 OMIM:314390 ORPHA:2052 ORPHA:1896 OMIM:273395
 

Human Phenotype Ontology(HPO) is developed by the Human Phenotype Ontology Consortium. The version used here is December 15 2022 release.