Human Phenotype Ontology 
Grandparent Node:
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Abnormality of male external genitalia (HP:0000032)help
Parent Node:
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Abnormal testis morphology (HP:0000035)help
..Starting node
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Vanishing testis (HP:0012870)help
Term ID: 12870
Name: Vanishing testis
Synonym: Testicular regression syndrome; Vanishing testis
Definition: A condition which is considered to be due to the subsequent atrophy and disappearance in fetal life of an initially normal testis. In the presence of spermatic cord structures is evidence of the presence of the testis in early intrauterine life. When associated with a blind-ending spermatic cord, this entity is named as his absence of a testis in an otherwise normal 46XY male is usually unilateral and is assumed to be a consequence of intrauterine or perinatal torsion or infarction.
Comments:
Reference: HP:0012870
Genes and Diseases:
 
       Child Nodes:

 Sister Nodes: 
..expandAbnormality of the Leydig cells (HP:0010789) help
..expandAbnormality of the testis size (HP:0045058) help
..expandAnorchism (HP:0030869) help
..expandCryptorchidism (HP:0000028) help
..expandDysplastic testes (HP:0008733) help
..expandHydrocele testis (HP:0000034) help
..expandIntratesticular abscess (HP:0025038) help
..expandMonorchism (HP:0030868) help
..expandOrchitis (HP:0100796) help
..expandPrimary testicular failure (HP:0008720) help
..expandRetractile testis (HP:0012646) help
..expandSupernumerary testes (HP:0010470) help
..expandTesticular atrophy (HP:0000029) help
..expandTesticular dysgenesis (HP:0008715) help
..expandTesticular fibrosis (HP:0012860) help
..expandTesticular lipomatosis (HP:0025476) help
..expandTesticular microlithiasis (HP:0012215) help
..expandTesticular neoplasm (HP:0010788) help
..expandTesticular torsion (HP:0100813) help
InputHPO IDHPO termDistanceGeneGene id entrezHGNC IDDiseaseIdDiseaseNameFrequencyOnsetHGMD variantsClinVar variants
 
HPO disease - gene - phenotype typical associations:
 
HPO disease - gene - phenotype less frequent non-typical associations:
HP:0012870HP:0012870Vanishing testis0DHX37 CL E G H5764717210OMIM:27325046, XY sex reversal 11.2
HP:0012870HP:0012870Vanishing testis0DHX37 CL E G H5764717210ORPHA:25151046,XY partial gonadal dysgenesisHP:0040281 - Very frequent2
HP:0012870HP:0012870Vanishing testis0DMRT3 CL E G H5852413909ORPHA:25151046,XY partial gonadal dysgenesisHP:0040281 - Very frequent1
HP:0012870HP:0012870Vanishing testis0GATA4 CL E G H26264173ORPHA:25151046,XY partial gonadal dysgenesisHP:0040281 - Very frequent87
HP:0012870HP:0012870Vanishing testis0MAP3K1 CL E G H42146848ORPHA:25151046,XY partial gonadal dysgenesisHP:0040281 - Very frequent13
HP:0012870HP:0012870Vanishing testis0NR0B1 CL E G H1907960ORPHA:25151046,XY partial gonadal dysgenesisHP:0040281 - Very frequent48
HP:0012870HP:0012870Vanishing testis0NR5A1 CL E G H25167983ORPHA:25151046,XY partial gonadal dysgenesisHP:0040281 - Very frequent38
HP:0012870HP:0012870Vanishing testis0SOX9 CL E G H666211204ORPHA:25151046,XY partial gonadal dysgenesisHP:0040281 - Very frequent109
HP:0012870HP:0012870Vanishing testis0SRY CL E G H673611311ORPHA:25151046,XY partial gonadal dysgenesisHP:0040281 - Very frequent23
HP:0012870HP:0012870Vanishing testis0VAMP7 CL E G H684511486ORPHA:25151046,XY partial gonadal dysgenesisHP:0040281 - Very frequent2
HP:0012870HP:0012870Vanishing testis0WT1 CL E G H749012796ORPHA:25151046,XY partial gonadal dysgenesisHP:0040281 - Very frequent177
HP:0012870HP:0012870Vanishing testis0WWOX CL E G H5174112799ORPHA:25151046,XY partial gonadal dysgenesisHP:0040281 - Very frequent149
HP:0012870HP:0012870Vanishing testis0ZFPM2 CL E G H2341416700ORPHA:25151046,XY partial gonadal dysgenesisHP:0040281 - Very frequent31


Genes (12) :DHX37 DMRT3 GATA4 MAP3K1 NR0B1 NR5A1 SOX9 SRY VAMP7 WT1 WWOX ZFPM2

Diseases (2) :OMIM:273250 ORPHA:251510
 

Human Phenotype Ontology(HPO) is developed by the Human Phenotype Ontology Consortium. The version used here is December 15 2022 release.