Variation_Name | GeneID | GeneSymbol | ClinicalSignificance | dbSNP | RCVaccession | TestedInGTR | PhenotypeIDs | Chromosome | Start | Stop | HGVS_c | HGVS_p | HGVS_g | OtherIDs | Disease_ClinVar | Disease_hgmd | NC_012920.1:m.14743A>G | -1 | - | Likely pathogenic | 527236161 | RCV000133403; | N | Gene:6765,MedGen:C0919267,OMIM:167000,SNOMED CT:123843001 | M | 14743 | 14743 | - | - | NC_012920.1:m.14743A>G | - | C0919267 167000 Neoplasm of ovary | | |
NM_005163.2(AKT1):c.49G>A (p.Glu17Lys) | 207 | AKT1 | Pathogenic | 121434592 | RCV000015017; RCV000015018; RCV000015019; RCV000031926; | N | Gene:6765,MedGen:C0919267,OMIM:167000,SNOMED CT:123843001; MedGen:C0085261,OMIM:176920,ORPHA:744,SNOMED CT:23150001; MedGen:C0699790,OMIM:114500,SNOMED CT:269533000; MedGen:C0858252 | 14 | 105246551 | 105246551 | NM_005163.2:c.49G>A | NP_005154.2:p.Glu17Lys | NC_000014.8:g.105246551C>T | OMIM Allelic Variant:164730.0001 | C0858252 Breast adenocarcinoma; C0699790 114500 Carcinoma of colon; C0919267 167000 Neoplasm of ovary; C0085261 176920 Proteus syndrome | | |
NM_004360.4(CDH1):c.2512A>G (p.Ser838Gly) | 999 | CDH1 | Likely benign;Pathogenic;Uncertain significance | 121964872 | RCV000198450; RCV000013020; RCV000212390; RCV000115857; | N | Gene:6765,MedGen:C0919267,OMIM:167000,SNOMED CT:123843001; MedGen:C0027672,SNOMED CT:699346009; MedGen:C1708349,OMIM:137215; MedGen:CN169374 | 16 | 68867265 | 68867265 | NM_004360.4:c.2512A>G | NP_004351.1:p.Ser838Gly | | OMIM Allelic Variant:192090.0003 | C0027672 Hereditary cancer-predisposing syndrome; C1708349 137215 Hereditary diffuse gastric cancer; C0919267 167000 Neoplasm of ovary; CN169374 not specified | | |
NM_001904.3(CTNNB1):c.110C>G (p.Ser37Cys) | 1499 | CTNNB1 | Likely pathogenic;Pathogenic | 121913403 | RCV000030945; RCV000019141; RCV000087195; | N | Gene:6765,MedGen:C0919267,OMIM:167000,SNOMED CT:123843001; MedGen:C0206711,OMIM:132600,ORPHA:91414; MedGen:CN221809 | 3 | 41266113 | 41266113 | NM_001904.3:c.110C>G | NP_001895.1:p.Ser37Cys | NC_000003.11:g.41266113C>G,NC_000003.11:g.41266113C>T | OMIM Allelic Variant:116806.0009,OMIM Allelic Variant:116806.0012 | C0919267 167000 Neoplasm of ovary; CN221809 not provided; C0206711 132600 Pilomatrixoma | | |
NM_001005862.2(ERBB2):c.2480A>G (p.Asn827Ser) | 2064 | ERBB2 | Pathogenic | 28933370 | RCV000014894; | N | Gene:6765,MedGen:C0919267,OMIM:167000,SNOMED CT:123843001 | 17 | 37881378 | 37881378 | NM_001005862.2:c.2480A>G | NP_001005862.1:p.Asn827Ser | NC_000017.10:g.37881378A>G | OMIM Allelic Variant:164870.0008 | C0919267 167000 Neoplasm of ovary | | |
NM_001005862.2(ERBB2):c.2515C>T (p.Leu839=) | 2064 | ERBB2 | not provided | 104886010 | RCV000119349; | N | Gene:6765,MedGen:C0919267,OMIM:167000,SNOMED CT:123843001 | 17 | 37881413 | 37881413 | NM_001005862.2:c.2515C>T | NP_001005862.1:p.Leu839= | NC_000017.10:g.37881413C>T | - | C0919267 167000 Neoplasm of ovary | | |
NM_022965.3(FGFR3):c.1793G>T (p.Gly598Val) | 2261 | FGFR3 | not provided | 104886023 | RCV000119369; | N | Gene:6765,MedGen:C0919267,OMIM:167000,SNOMED CT:123843001 | 4 | 1808371 | 1808371 | NM_022965.3:c.1793G>T | NP_075254.1:p.Gly598Val | NC_000004.11:g.1808371G>T | - | C0919267 167000 Neoplasm of ovary | | |
NM_001002295.1(GATA3):c.925-16C>T | 2625 | GATA3 | not provided | 104886016 | RCV000119362; | N | Gene:6765,MedGen:C0919267,OMIM:167000,SNOMED CT:123843001 | 10 | 8111420 | 8111420 | NM_001002295.1:c.925-16C>T | | NC_000010.10:g.8111420C>T | - | C0919267 167000 Neoplasm of ovary | | |
NM_033360.3(KRAS):c.35G>A (p.Gly12Asp) | 3845 | KRAS | Pathogenic | 121913529 | RCV000144969; RCV000144970; RCV000150896; RCV000022799; RCV000150897; RCV000013411; RCV000013412; RCV000029214; RCV000029215; | N | Gene:6765,MedGen:C0919267,OMIM:167000,SNOMED CT:123843001; MedGen:C0007131,SNOMED CT:254637007; MedGen:C0038356,OMIM:613659,SNOMED CT:126824007; MedGen:C0235974,OMIM:260350,ORPHA:217074,SNOMED CT:372142002; MedGen:C0265318,OMIM:163200,SNOMED CT:239112008; Me | 12 | 25398284 | 25398284 | NM_033360.3:c.35G>A | NP_203524.1:p.Gly12Asp | NC_000012.11:g.25398284C>A,NC_000012.11:g.25398284C>G,NC_000012.11:g.25398284C>T | OMIM Allelic Variant:190070.0005 | C0235974 260350 Carcinoma of pancreas; C0265318 163200 Epidermal nevus syndrome; C0919267 167000 Neoplasm of ovary; C0038356 613659 Neoplasm of stomach; C0007131 Non-small cell lung cancer | | |
NM_033360.3(KRAS):c.34G>A (p.Gly12Ser) | 3845 | KRAS | Pathogenic | 121913530 | RCV000144971; RCV000038264; RCV000119790; RCV000013414; | N | Gene:6765,MedGen:C0919267,OMIM:167000,SNOMED CT:123843001; MedGen:C0007131,SNOMED CT:254637007; MedGen:C0038356,OMIM:613659,SNOMED CT:126824007; MedGen:C0349639,OMIM:607785,ORPHA:86834 | 12 | 25398285 | 25398285 | NM_033360.3:c.34G>A | NP_203524.1:p.Gly12Ser | NC_000012.11:g.25398285C>A,NC_000012.11:g.25398285C>G,NC_000012.11:g.25398285C>T | OMIM Allelic Variant:190070.0007 | C0349639 607785 Juvenile myelomonocytic leukemia; C0919267 167000 Neoplasm of ovary; C0038356 613659 Neoplasm of stomach; C0007131 Non-small cell lung cancer | | |
NC_012920.1:m.14753C>T | 4519 | MT-CYB | Likely pathogenic | 527236162 | RCV000133404; | N | Gene:6765,MedGen:C0919267,OMIM:167000,SNOMED CT:123843001 | M | 14753 | 14753 | - | - | NC_012920.1:m.14753C>T | - | C0919267 167000 Neoplasm of ovary | | |
NC_012920.1:m.14784T>C | 4519 | MT-CYB | Likely pathogenic | 527236163 | RCV000133405; | N | Gene:6765,MedGen:C0919267,OMIM:167000,SNOMED CT:123843001 | M | 14784 | 14784 | - | - | NC_012920.1:m.14784T>C | - | C0919267 167000 Neoplasm of ovary | | |
NC_012920.1:m.15058C>T | 4519 | MT-CYB | Likely pathogenic | 527236171 | RCV000133413; | N | Gene:6765,MedGen:C0919267,OMIM:167000,SNOMED CT:123843001 | M | 15058 | 15058 | - | - | NC_012920.1:m.15058C>T | - | C0919267 167000 Neoplasm of ovary | | |
NC_012920.1:m.15061A>G | 4519 | MT-CYB | Likely pathogenic | 527236205 | RCV000133452; | N | Gene:6765,MedGen:C0919267,OMIM:167000,SNOMED CT:123843001 | M | 15061 | 15061 | - | - | NC_012920.1:m.15061A>G | - | C0919267 167000 Neoplasm of ovary | | |
NC_012920.1:m.15098A>G | 4519 | MT-CYB | Likely pathogenic | 527236172 | RCV000133414; | N | Gene:6765,MedGen:C0919267,OMIM:167000,SNOMED CT:123843001 | M | 15098 | 15098 | - | - | NC_012920.1:m.15098A>G | - | C0919267 167000 Neoplasm of ovary | | |
NC_012920.1:m.15148G>A | 4519 | MT-CYB | Likely pathogenic | 527236206 | RCV000133453; | N | Gene:6765,MedGen:C0919267,OMIM:167000,SNOMED CT:123843001 | M | 15148 | 15148 | - | - | NC_012920.1:m.15148G>A | - | C0919267 167000 Neoplasm of ovary | | |
NC_012920.1:m.15259C>T | 4519 | MT-CYB | Likely pathogenic | 527236207 | RCV000133454; | N | Gene:6765,MedGen:C0919267,OMIM:167000,SNOMED CT:123843001 | M | 15259 | 15259 | - | - | NC_012920.1:m.15259C>T | - | C0919267 167000 Neoplasm of ovary | | |
NC_012920.1:m.15314G>A | 4519 | MT-CYB | Likely pathogenic | 527236176 | RCV000133418; | N | Gene:6765,MedGen:C0919267,OMIM:167000,SNOMED CT:123843001 | M | 15314 | 15314 | - | - | NC_012920.1:m.15314G>A | - | C0919267 167000 Neoplasm of ovary | | |
NC_012920.1:m.15328A>G | 4519 | MT-CYB | Likely pathogenic | 527236178 | RCV000133420; | N | Gene:6765,MedGen:C0919267,OMIM:167000,SNOMED CT:123843001 | M | 15328 | 15328 | - | - | NC_012920.1:m.15328A>G | - | C0919267 167000 Neoplasm of ovary | | |
NC_012920.1:m.15334C>T | 4519 | MT-CYB | Likely pathogenic | 527236179 | RCV000133421; | N | Gene:6765,MedGen:C0919267,OMIM:167000,SNOMED CT:123843001 | M | 15334 | 15334 | - | - | NC_012920.1:m.15334C>T | - | C0919267 167000 Neoplasm of ovary | | |
NC_012920.1:m.15363A>G | 4519 | MT-CYB | Likely pathogenic | 527236182 | RCV000133426; | N | Gene:6765,MedGen:C0919267,OMIM:167000,SNOMED CT:123843001 | M | 15363 | 15363 | - | - | NC_012920.1:m.15363A>G | - | C0919267 167000 Neoplasm of ovary | | |
NC_012920.1:m.15431G>A | 4519 | MT-CYB | Likely pathogenic | 193302993 | RCV000133455; | N | Gene:6765,MedGen:C0919267,OMIM:167000,SNOMED CT:123843001 | M | 15431 | 15431 | - | - | NC_012920.1:m.15431G>A | - | C0919267 167000 Neoplasm of ovary | | |
NC_012920.1:m.15452C>A | 4519 | MT-CYB | Likely pathogenic | 193302994 | RCV000133456; | N | Gene:6765,MedGen:C0919267,OMIM:167000,SNOMED CT:123843001 | M | 15452 | 15452 | - | - | NC_012920.1:m.15452C>A | - | C0919267 167000 Neoplasm of ovary | | |
NC_012920.1:m.15453T>C | 4519 | MT-CYB | Likely pathogenic | 527236184 | RCV000133428; | N | Gene:6765,MedGen:C0919267,OMIM:167000,SNOMED CT:123843001 | M | 15453 | 15453 | - | - | NC_012920.1:m.15453T>C | - | C0919267 167000 Neoplasm of ovary | | |
NC_012920.1:m.15459C>T | 4519 | MT-CYB | Likely pathogenic | 527236186 | RCV000133430; | N | Gene:6765,MedGen:C0919267,OMIM:167000,SNOMED CT:123843001 | M | 15459 | 15459 | - | - | NC_012920.1:m.15459C>T | - | C0919267 167000 Neoplasm of ovary | | |
NC_012920.1:m.15511T>C | 4519 | MT-CYB | Likely pathogenic | 527236188 | RCV000133432; | N | Gene:6765,MedGen:C0919267,OMIM:167000,SNOMED CT:123843001 | M | 15511 | 15511 | - | - | NC_012920.1:m.15511T>C | - | C0919267 167000 Neoplasm of ovary | | |
NC_012920.1:m.15607A>G | 4519 | MT-CYB | Likely pathogenic | 193302996 | RCV000133457; | N | Gene:6765,MedGen:C0919267,OMIM:167000,SNOMED CT:123843001 | M | 15607 | 15607 | - | - | NC_012920.1:m.15607A>G | - | C0919267 167000 Neoplasm of ovary | | |
NC_012920.1:m.15670T>C | 4519 | MT-CYB | Likely pathogenic | 193302997 | RCV000133458; | N | Gene:6765,MedGen:C0919267,OMIM:167000,SNOMED CT:123843001 | M | 15670 | 15670 | - | - | NC_012920.1:m.15670T>C | - | C0919267 167000 Neoplasm of ovary | | |
NC_012920.1:m.15884G>A | 4519 | MT-CYB | Likely pathogenic | 527236195 | RCV000133439; | N | Gene:6765,MedGen:C0919267,OMIM:167000,SNOMED CT:123843001 | M | 15884 | 15884 | - | - | NC_012920.1:m.15884G>A | - | C0919267 167000 Neoplasm of ovary | | |
NC_012920.1:m.15890C>A | 4576 | MT-TT | Likely pathogenic | 527236196 | RCV000133440; | N | Gene:6765,MedGen:C0919267,OMIM:167000,SNOMED CT:123843001 | M | 15890 | 15890 | - | - | NC_012920.1:m.15890C>A | - | C0919267 167000 Neoplasm of ovary | | |
NC_012920.1:m.15928G>A | 4576 | MT-TT | Likely pathogenic | 527236198 | RCV000133442; | N | Gene:6765,MedGen:C0919267,OMIM:167000,SNOMED CT:123843001 | M | 15928 | 15928 | - | - | NC_012920.1:m.15928G>A | - | C0919267 167000 Neoplasm of ovary | | |
NC_012920.1:m.15932T>G | 4576 | MT-TT | Likely pathogenic | 527236199 | RCV000133443; | N | Gene:6765,MedGen:C0919267,OMIM:167000,SNOMED CT:123843001 | M | 15932 | 15932 | - | - | NC_012920.1:m.15932T>G | - | C0919267 167000 Neoplasm of ovary | | |
NC_012920.1:m.15943T>C | 4576 | MT-TT | Likely pathogenic | 527236200 | RCV000133444; | N | Gene:6765,MedGen:C0919267,OMIM:167000,SNOMED CT:123843001 | M | 15943 | 15943 | - | - | NC_012920.1:m.15943T>C | - | C0919267 167000 Neoplasm of ovary | | |
NM_001012393.2(OPCML):c.263C>G (p.Pro88Arg) | 4978 | OPCML | Pathogenic | 137852691 | RCV000009546; | N | Gene:6765,MedGen:C0919267,OMIM:167000,SNOMED CT:123843001 | 11 | 132527098 | 132527098 | NM_001012393.2:c.263C>G | NP_001012393.1:p.Pro88Arg | NC_000011.9:g.132527098G>C | OMIM Allelic Variant:600632.0001 | C0919267 167000 Neoplasm of ovary | | |
NM_024675.3(PALB2):c.1050_1053delAACA (p.Thr351Argfs) | 79728 | PALB2 | Pathogenic | 515726060 | RCV000114456; RCV000129806; | N | Gene:6765,MedGen:C0919267,OMIM:167000,SNOMED CT:123843001; MedGen:C0027672,SNOMED CT:699346009 | 16 | 23646814 | 23646817 | NM_024675.3:c.1050_1053delAACA | NP_078951.2:p.Thr351Argfs | | PALB2 database:PALB2_10062 | C0027672 Hereditary cancer-predisposing syndrome; C0919267 167000 Neoplasm of ovary | | |
NM_006218.3(PIK3CA):c.1258T>C (p.Cys420Arg) | 5290 | PIK3CA | Pathogenic | 121913272 | RCV000154512; RCV000024623; RCV000201232; | N | Gene:6765,MedGen:C0919267,OMIM:167000,SNOMED CT:123843001; MedGen:C2752042,OMIM:612918,ORPHA:140944; MedGen:CN233161 | 3 | 178927980 | 178927980 | NM_006218.3:c.1258T>C | NP_006209.2:p.Cys420Arg | | OMIM Allelic Variant:171834.0010 | C2752042 612918 Congenital lipomatous overgrowth, vascular malformations, and epidermal nevi; C0919267 167000 Neoplasm of ovary; CN233161 PIK3CA Related Overgrowth Spectrum | | |
NM_006218.3(PIK3CA):c.1624G>A (p.Glu542Lys) | 5290 | PIK3CA | Pathogenic | 121913273 | RCV000154513; RCV000151649; RCV000024622; | N | Gene:6765,MedGen:C0919267,OMIM:167000,SNOMED CT:123843001; MedGen:C0007131,SNOMED CT:254637007; MedGen:C2752042,OMIM:612918,ORPHA:140944 | 3 | 178936082 | 178936082 | NM_006218.3:c.1624G>A | NP_006209.2:p.Glu542Lys | | OMIM Allelic Variant:171834.0009 | C2752042 612918 Congenital lipomatous overgrowth, vascular malformations, and epidermal nevi; C0919267 167000 Neoplasm of ovary; C0007131 Non-small cell lung cancer | | |
NM_006218.3(PIK3CA):c.1634A>C (p.Glu545Ala) | 5290 | PIK3CA | Pathogenic | 121913274 | RCV000014643; RCV000154515; | N | Gene:6765,MedGen:C0919267,OMIM:167000,SNOMED CT:123843001; MedGen:C2239176,OMIM:114550, Orphanet:ORPHA88673,SNOMED CT:187769009,SNOMED CT:25370001 | 3 | 178936092 | 178936092 | NM_006218.3:c.1634A>C | NP_006209.2:p.Glu545Ala | | OMIM Allelic Variant:171834.0008 | C2239176 114550 Hepatocellular carcinoma; C0919267 167000 Neoplasm of ovary; C0410173 253700 Severe autosomal recessive muscular dystrophy of childhood - North African type | | |
NM_006218.3(PIK3CA):c.1637A>G (p.Gln546Arg) | 5290 | PIK3CA | Pathogenic | 397517201 | RCV000038672; | N | Gene:6765,MedGen:C0919267,OMIM:167000,SNOMED CT:123843001 | 3 | 178936095 | 178936095 | NM_006218.3:c.1637A>G | NP_006209.2:p.Gln546Arg | NC_000003.11:g.178936095A>G | - | C0919267 167000 Neoplasm of ovary | | |
NM_006218.3(PIK3CA):c.3140A>G (p.His1047Arg) | 5290 | PIK3CA | Pathogenic | 121913279 | RCV000014622; RCV000014624; RCV000014623; RCV000014627; RCV000014626; RCV000154516; RCV000014628; RCV000014625; RCV000024621; RCV000201231; | N | Gene:6765,MedGen:C0919267,OMIM:167000,SNOMED CT:123843001; MedGen:C0007131,SNOMED CT:254637007; MedGen:C0022603,OMIM:182000; MedGen:C0038356,OMIM:613659,SNOMED CT:126824007; MedGen:C0677886; MedGen:C0699790,OMIM:114500,SNOMED CT:269533000; MedGen:C0858252; Med | 3 | 178952085 | 178952085 | NM_006218.3:c.3140A>G | NP_006209.2:p.His1047Arg | | OMIM Allelic Variant:171834.0001 | C0858252 Breast adenocarcinoma; C0699790 114500 Carcinoma of colon; C0022603 182000 Keratosis, seborrheic; C0919267 167000 Neoplasm of ovary; C0038356 613659 Neoplasm of stomach; C0007131 Non-small cell lung cancer; C0677886 Ovarian epithelial cancer | | |
NM_001177314.1(RRAS2):c.110A>T (p.Gln37Leu) | 22800 | RRAS2 | Pathogenic | 113954997 | RCV000010054; | N | Gene:6765,MedGen:C0919267,OMIM:167000,SNOMED CT:123843001 | 11 | 14316390 | 14316390 | NM_001177314.1:c.110A>T | NP_001170785.1:p.Gln37Leu | NC_000011.9:g.14316390T>A | OMIM Allelic Variant:600098.0001 | C0919267 167000 Neoplasm of ovary | | |
NM_000546.5(TP53):c.666G>T (p.Pro222=) | 7157 | TP53 | Benign;Likely benign | 72661118 | RCV000199198; RCV000119374; RCV000162396; | N | Gene:6765,MedGen:C0919267,OMIM:167000,SNOMED CT:123843001; MedGen:C0027672,SNOMED CT:699346009; MedGen:C0085390, Orphanet:ORPHA524,SNOMED CT:428850001 | 17 | 7578183 | 7578183 | NM_000546.5:c.666G>T | NP_000537.3:p.Pro222= | NC_000017.10:g.7578183C>A,NC_000017.10:g.7578183C>T | - | C0027672 Hereditary cancer-predisposing syndrome; C0085390 Li-Fraumeni syndrome; C0919267 167000 Neoplasm of ovary | | |
NM_000546.5(TP53):c.462C>T (p.Gly154=) | 7157 | TP53 | not provided | 137852793 | RCV000119798; | N | Gene:6765,MedGen:C0919267,OMIM:167000,SNOMED CT:123843001 | 17 | 7578468 | 7578468 | NM_000546.5:c.462C>T | NP_000537.3:p.Gly154= | NC_000017.10:g.7578468G>A | - | C0919267 167000 Neoplasm of ovary | | |