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Examples Gene: MT-ND1, POLG, Region: M:1-1000 Variant: m.8993T>G, 1:g.10042757T>C rs3888511 MSCV_0000006, ClinVar: RCV000000015, Disease: Leigh syndrome, Phenotype: Retinopathy

MSeqDR Central Portal

MSeqDR Data Summary for the Term WT1:

Ensembl Gene ID	Associated Gene Name	LSDB Genes	LSDB Variants	clinVar hits	Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID	Description	Chr	Gene Start	Gene End	Strand	Band	Transcript Start bp	Transcript End bp	Associated Gene Name	Associated Transcript Name	Associated Gene DB	Associated Transcript DB	Transcript count	pct GC content	Gene Biotype	Transcript Biotype	Source Gene	Source Transcript	Status gene	Status transcript	EntrezGene ID	HGNC ID	HGNC Symbol	RefSeq mRNA	Seq region id
ENSG00000184937	WT1	0	0	34	ENSG00000184937	ENST00000379079	ENSP00000368370	Wilms tumor 1 [Source:HGNC Symbol;Acc:12796]	11	32409321	32457176	-1	p13	32409321	32452359	WT1	WT1-002	HGNC Symbol	HGNC transcript name	9	46.45	protein_coding	protein_coding	ensembl_hava	havana	KNOWN	KNOWN	7490	12796	WT1	NM_001198551	27504

MSeqDR Master Exome Data Set M1: 386 entries from same gene

No.	Chr	Position	Reference	Variant	EnsemblTranscriptID	EnsemblGeneID	Gene_Start	Gene_End	EnsemblProteinID	Gene	strand	Uniprot	cChange	pChange	Nature	dbSNP	Freq	EVS	phastCons	SIFT	Polyphen	HGMD	type	samples
1	11	32409365	A	T	ENST00000332351	ENSG00000184937	32409321	32457176	ENSP00000331327	WT1	-1	-	-	-	3'_UTR	NA	-	-	lod=222:547	-	-	-	het	23
2	11	32409365	A	T	ENST00000332351	ENSG00000184937	32409321	32457176	ENSP00000331327	WT1	-1	-	-	-	3'_UTR	NA	-	-	lod=222:547	-	-	-	hom	2
3	11	32409365	A	T	ENST00000379077	ENSG00000184937	32409321	32457176	ENSP00000368368	WT1	-1	-	-	-	3'_UTR	NA	-	-	lod=222:547	-	-	-	het	23
4	11	32409365	A	T	ENST00000379077	ENSG00000184937	32409321	32457176	ENSP00000368368	WT1	-1	-	-	-	3'_UTR	NA	-	-	lod=222:547	-	-	-	hom	2
5	11	32409365	A	T	ENST00000379079	ENSG00000184937	32409321	32457176	ENSP00000368370	WT1	-1	WT1_HUMAN	-	-	3'_UTR	NA	-	-	lod=222:547	-	-	-	het	23
6	11	32409365	A	T	ENST00000379079	ENSG00000184937	32409321	32457176	ENSP00000368370	WT1	-1	WT1_HUMAN	-	-	3'_UTR	NA	-	-	lod=222:547	-	-	-	hom	2
7	11	32409365	A	T	ENST00000452863	ENSG00000184937	32409321	32457176	ENSP00000415516	WT1	-1	WT1_HUMAN	-	-	3'_UTR	NA	-	-	lod=222:547	-	-	-	het	23
8	11	32409365	A	T	ENST00000452863	ENSG00000184937	32409321	32457176	ENSP00000415516	WT1	-1	WT1_HUMAN	-	-	3'_UTR	NA	-	-	lod=222:547	-	-	-	hom	2
9	11	32409365	A	T	ENST00000530998	ENSG00000184937	32409321	32457176	ENSP00000435307	WT1	-1	WT1_HUMAN	-	-	3'_UTR	NA	-	-	lod=222:547	-	-	-	het	23
10	11	32409365	A	T	ENST00000530998	ENSG00000184937	32409321	32457176	ENSP00000435307	WT1	-1	WT1_HUMAN	-	-	3'_UTR	NA	-	-	lod=222:547	-	-	-	hom	2
11	11	32409395	T	C	ENST00000332351	ENSG00000184937	32409321	32457176	ENSP00000331327	WT1	-1	-	-	-	3'_UTR	rs5030329	0.0084	-	-	-	-	-	het	1
12	11	32409395	T	C	ENST00000379077	ENSG00000184937	32409321	32457176	ENSP00000368368	WT1	-1	-	-	-	3'_UTR	rs5030329	0.0084	-	-	-	-	-	het	1
13	11	32409395	T	C	ENST00000379079	ENSG00000184937	32409321	32457176	ENSP00000368370	WT1	-1	WT1_HUMAN	-	-	3'_UTR	rs5030329	0.0084	-	-	-	-	-	het	1
14	11	32409395	T	C	ENST00000452863	ENSG00000184937	32409321	32457176	ENSP00000415516	WT1	-1	WT1_HUMAN	-	-	3'_UTR	rs5030329	0.0084	-	-	-	-	-	het	1
15	11	32409395	T	C	ENST00000530998	ENSG00000184937	32409321	32457176	ENSP00000435307	WT1	-1	WT1_HUMAN	-	-	3'_UTR	rs5030329	0.0084	-	-	-	-	-	het	1
16	11	32409472	T	A	ENST00000332351	ENSG00000184937	32409321	32457176	ENSP00000331327	WT1	-1	-	-	-	3'_UTR	rs5030328	0.02617	-	lod=343:593	-	-	-	het	37
17	11	32409472	T	A	ENST00000379077	ENSG00000184937	32409321	32457176	ENSP00000368368	WT1	-1	-	-	-	3'_UTR	rs5030328	0.02617	-	lod=343:593	-	-	-	het	37
18	11	32409472	T	A	ENST00000379079	ENSG00000184937	32409321	32457176	ENSP00000368370	WT1	-1	WT1_HUMAN	-	-	3'_UTR	rs5030328	0.02617	-	lod=343:593	-	-	-	het	37
19	11	32409472	T	A	ENST00000452863	ENSG00000184937	32409321	32457176	ENSP00000415516	WT1	-1	WT1_HUMAN	-	-	3'_UTR	rs5030328	0.02617	-	lod=343:593	-	-	-	het	37
20	11	32409472	T	A	ENST00000530998	ENSG00000184937	32409321	32457176	ENSP00000435307	WT1	-1	WT1_HUMAN	-	-	3'_UTR	rs5030328	0.02617	-	lod=343:593	-	-	-	het	37

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Transcripts and variants in the surrounding WT1 11:32409321..32457176 region Gbrowse