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Examples Gene: MT-ND1, POLG, Region: M:1-1000 Variant: m.8993T>G, 1:g.10042757T>C rs3888511 MSCV_0000006, ClinVar: RCV000000015, Disease: Leigh syndrome, Phenotype: Retinopathy

MSeqDR Central Portal

MSeqDR Data Summary for the Term WDR35:

Ensembl Gene ID	Associated Gene Name	LSDB Genes	LSDB Variants	clinVar hits	Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID	Description	Chr	Gene Start	Gene End	Strand	Band	Transcript Start bp	Transcript End bp	Associated Gene Name	Associated Transcript Name	Associated Gene DB	Associated Transcript DB	Transcript count	pct GC content	Gene Biotype	Transcript Biotype	Source Gene	Source Transcript	Status gene	Status transcript	EntrezGene ID	HGNC ID	HGNC Symbol	RefSeq mRNA	Seq region id
ENSG00000118965	WDR35	0	0	24	ENSG00000118965	ENST00000281405	ENSP00000281405	WD repeat domain 35 [Source:HGNC Symbol;Acc:29250]	2	20110021	20189892	-1	p24.1	20110021	20189883	WDR35	WDR35-002	HGNC Symbol	HGNC transcript name	7	36.9	protein_coding	protein_coding	ensembl_hava	ensembl_hava	KNOWN	KNOWN	57539	29250	WDR35	NM_020779	27508

MSeqDR Master Exome Data Set M1: 344 entries from same gene

No.	Chr	Position	Reference	Variant	EnsemblTranscriptID	EnsemblGeneID	Gene_Start	Gene_End	EnsemblProteinID	Gene	strand	Uniprot	cChange	pChange	Nature	dbSNP	Freq	EVS	phastCons	SIFT	Polyphen	HGMD	type	samples
1	2	20110084	G	T	ENST00000281405	ENSG00000118965	20110021	20189892	ENSP00000281405	WDR35	-1	WDR35_HUMAN	-	-	3'_UTR	rs186978842	0.00186	-	-	-	-	-	het	1
2	2	20110084	G	T	ENST00000345530	ENSG00000118965	20110021	20189892	ENSP00000314444	WDR35	-1	WDR35_HUMAN	-	-	3'_UTR	rs186978842	0.00186	-	-	-	-	-	het	1
3	2	20110094	C	T	ENST00000281405	ENSG00000118965	20110021	20189892	ENSP00000281405	WDR35	-1	WDR35_HUMAN	-	-	3'_UTR	rs189820516	0.00184	-	-	-	-	-	het	1
4	2	20110094	C	T	ENST00000345530	ENSG00000118965	20110021	20189892	ENSP00000314444	WDR35	-1	WDR35_HUMAN	-	-	3'_UTR	rs189820516	0.00184	-	-	-	-	-	het	1
5	2	20110362	C	T	ENST00000281405	ENSG00000118965	20110021	20189892	ENSP00000281405	WDR35	-1	WDR35_HUMAN	-	-	3'_UTR	rs76072774	0.1258	-	-	-	-	-	het	45
6	2	20110362	C	T	ENST00000281405	ENSG00000118965	20110021	20189892	ENSP00000281405	WDR35	-1	WDR35_HUMAN	-	-	3'_UTR	rs76072774	0.1258	-	-	-	-	-	hom	2
7	2	20110362	C	T	ENST00000345530	ENSG00000118965	20110021	20189892	ENSP00000314444	WDR35	-1	WDR35_HUMAN	-	-	3'_UTR	rs76072774	0.1258	-	-	-	-	-	het	45
8	2	20110362	C	T	ENST00000345530	ENSG00000118965	20110021	20189892	ENSP00000314444	WDR35	-1	WDR35_HUMAN	-	-	3'_UTR	rs76072774	0.1258	-	-	-	-	-	hom	2
9	2	20110424	C	T	ENST00000281405	ENSG00000118965	20110021	20189892	ENSP00000281405	WDR35	-1	WDR35_HUMAN	-	-	3'_UTR	NA	-	-	-	-	-	-	het	1
10	2	20110424	C	T	ENST00000345530	ENSG00000118965	20110021	20189892	ENSP00000314444	WDR35	-1	WDR35_HUMAN	-	-	3'_UTR	NA	-	-	-	-	-	-	het	1
11	2	20110483	G	A	ENST00000281405	ENSG00000118965	20110021	20189892	ENSP00000281405	WDR35	-1	WDR35_HUMAN	-	-	3'_UTR	rs74469198	0.0708	-	-	-	-	-	het	29
12	2	20110483	G	A	ENST00000345530	ENSG00000118965	20110021	20189892	ENSP00000314444	WDR35	-1	WDR35_HUMAN	-	-	3'_UTR	rs74469198	0.0708	-	-	-	-	-	het	29
13	2	20110522	C	T	ENST00000281405	ENSG00000118965	20110021	20189892	ENSP00000281405	WDR35	-1	WDR35_HUMAN	-	-	3'_UTR	NA	-	-	-	-	-	-	het	1
14	2	20110522	C	T	ENST00000345530	ENSG00000118965	20110021	20189892	ENSP00000314444	WDR35	-1	WDR35_HUMAN	-	-	3'_UTR	NA	-	-	-	-	-	-	het	1
15	2	20110754	T	C	ENST00000281405	ENSG00000118965	20110021	20189892	ENSP00000281405	WDR35	-1	WDR35_HUMAN	-	-	3'_UTR	NA	-	-	-	-	-	-	het	1
16	2	20110754	T	C	ENST00000345530	ENSG00000118965	20110021	20189892	ENSP00000314444	WDR35	-1	WDR35_HUMAN	-	-	3'_UTR	NA	-	-	-	-	-	-	het	1
17	2	20110761	A	G	ENST00000281405	ENSG00000118965	20110021	20189892	ENSP00000281405	WDR35	-1	WDR35_HUMAN	-	-	3'_UTR	rs140503945	0.0014	-	-	-	-	-	het	1
18	2	20110761	A	G	ENST00000345530	ENSG00000118965	20110021	20189892	ENSP00000314444	WDR35	-1	WDR35_HUMAN	-	-	3'_UTR	rs140503945	0.0014	-	-	-	-	-	het	1
19	2	20110823	A	G	ENST00000281405	ENSG00000118965	20110021	20189892	ENSP00000281405	WDR35	-1	WDR35_HUMAN	-	-	3'_UTR	NA	-	-	-	-	-	-	het	3
20	2	20110823	A	G	ENST00000345530	ENSG00000118965	20110021	20189892	ENSP00000314444	WDR35	-1	WDR35_HUMAN	-	-	3'_UTR	NA	-	-	-	-	-	-	het	3

** A friendly reminder: guest user can access up to first 20 entries per gene from MSeqDR Master Exome Data Set M1. To gain access to the full power of MSeqDR, please login, or register, then request access to data.

As MSeqDR registered user , your accessible protected data set after login:

Select a dataset from the above drop-down list,
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Transcripts and variants in the surrounding WDR35 2:20110021..20189892 region Gbrowse