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Examples Gene: MT-ND1, POLG, Region: M:1-1000 Variant: m.8993T>G, 1:g.10042757T>C rs3888511 MSCV_0000006, ClinVar: RCV000000015, Disease: Leigh syndrome, Phenotype: Retinopathy

MSeqDR Central Portal

MSeqDR Data Summary for the Term TP63:

Ensembl Gene ID	Associated Gene Name	LSDB Genes	LSDB Variants	clinVar hits	Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID	Description	Chr	Gene Start	Gene End	Strand	Band	Transcript Start bp	Transcript End bp	Associated Gene Name	Associated Transcript Name	Associated Gene DB	Associated Transcript DB	Transcript count	pct GC content	Gene Biotype	Transcript Biotype	Source Gene	Source Transcript	Status gene	Status transcript	EntrezGene ID	HGNC ID	HGNC Symbol	RefSeq mRNA	Seq region id
ENSG00000073282	TP63	0	0	30	ENSG00000073282	ENST00000354600	ENSP00000346614	tumor protein p63 [Source:HGNC Symbol;Acc:15979]	3	189349205	189615068	1	q28	189507449	189615057	TP63	TP63-004	HGNC Symbol	HGNC transcript name	15	37.13	protein_coding	protein_coding	ensembl_hava	ensembl_hava	KNOWN	KNOWN	8626	15979	TP63	NM_001114980	27517

MSeqDR Master Exome Data Set M1: 282 entries from same gene

No.	Chr	Position	Reference	Variant	EnsemblTranscriptID	EnsemblGeneID	Gene_Start	Gene_End	EnsemblProteinID	Gene	strand	Uniprot	cChange	pChange	Nature	dbSNP	Freq	EVS	phastCons	SIFT	Polyphen	HGMD	type	samples
1	3	189349245	A	G	ENST00000264731	ENSG00000073282	189349205	189615068	ENSP00000264731	TP63	1	P63_HUMAN	-	-	5'_UTR	NA	-	G=2/A=3180;G=0/A=1384;G=2/A=4564	lod=55:397	-	-	-	het	6
2	3	189349245	A	G	ENST00000382063	ENSG00000073282	189349205	189615068	ENSP00000371495	TP63	1	P63_HUMAN	-	-	5'_UTR	NA	-	G=2/A=3180;G=0/A=1384;G=2/A=4564	lod=55:397	-	-	-	het	6
3	3	189349245	A	G	ENST00000486398	ENSG00000073282	189349205	189615068	-	TP63	1	-	c.41A>G	p.Y14C	non-syn	NA	-	G=2/A=3180;G=0/A=1384;G=2/A=4564	lod=55:397	-	-	-	het	6
4	3	189349247	A	T	ENST00000264731	ENSG00000073282	189349205	189615068	ENSP00000264731	TP63	1	P63_HUMAN	-	-	5'_UTR	rs28673064	0.5984	T=1542/A=1640;T=551/A=833;T=2093/A=2473	lod=55:397	-	-	-	hom	175
5	3	189349247	A	T	ENST00000264731	ENSG00000073282	189349205	189615068	ENSP00000264731	TP63	1	P63_HUMAN	-	-	5'_UTR	rs28673064	0.5984	T=1542/A=1640;T=551/A=833;T=2093/A=2473	lod=55:397	-	-	-	het	411
6	3	189349247	A	T	ENST00000382063	ENSG00000073282	189349205	189615068	ENSP00000371495	TP63	1	P63_HUMAN	-	-	5'_UTR	rs28673064	0.5984	T=1542/A=1640;T=551/A=833;T=2093/A=2473	lod=55:397	-	-	-	hom	175
7	3	189349247	A	T	ENST00000382063	ENSG00000073282	189349205	189615068	ENSP00000371495	TP63	1	P63_HUMAN	-	-	5'_UTR	rs28673064	0.5984	T=1542/A=1640;T=551/A=833;T=2093/A=2473	lod=55:397	-	-	-	het	411
8	3	189349247	A	T	ENST00000486398	ENSG00000073282	189349205	189615068	-	TP63	1	-	c.43A>T	p.M15L	non-syn	rs28673064	0.5984	T=1542/A=1640;T=551/A=833;T=2093/A=2473	lod=55:397	-	-	-	hom	175
9	3	189349247	A	T	ENST00000486398	ENSG00000073282	189349205	189615068	-	TP63	1	-	c.43A>T	p.M15L	non-syn	rs28673064	0.5984	T=1542/A=1640;T=551/A=833;T=2093/A=2473	lod=55:397	-	-	-	het	411
10	3	189349297	T	C	ENST00000264731	ENSG00000073282	189349205	189615068	ENSP00000264731	TP63	1	P63_HUMAN	-	-	5'_UTR	NA	-	-	lod=352:596	-	-	-	het	2
11	3	189349297	T	C	ENST00000320472	ENSG00000073282	189349205	189615068	ENSP00000317510	TP63	1	P63_HUMAN	-	-	5'_UTR	NA	-	-	lod=352:596	-	-	-	het	2
12	3	189349297	T	C	ENST00000382063	ENSG00000073282	189349205	189615068	ENSP00000371495	TP63	1	P63_HUMAN	-	-	5'_UTR	NA	-	-	lod=352:596	-	-	-	het	2
13	3	189349297	T	C	ENST00000418709	ENSG00000073282	189349205	189615068	ENSP00000407144	TP63	1	P63_HUMAN	-	-	5'_UTR	NA	-	-	lod=352:596	-	-	-	het	2
14	3	189349297	T	C	ENST00000486398	ENSG00000073282	189349205	189615068	-	TP63	1	-	c.93T>C	p.V31V	syn	NA	-	-	lod=352:596	-	-	-	het	2
15	3	189456420	C	-TA	ENST00000264731	ENSG00000073282	189349205	189615068	ENSP00000264731	TP63	1	P63_HUMAN	-	-	-9bp 3'_splice_site	rs145959198	-	-	-	-	-	-	het	1
16	3	189456420	C	-TA	ENST00000320472	ENSG00000073282	189349205	189615068	ENSP00000317510	TP63	1	P63_HUMAN	-	-	-9bp 3'_splice_site	rs145959198	-	-	-	-	-	-	het	1
17	3	189456420	C	-TA	ENST00000382063	ENSG00000073282	189349205	189615068	ENSP00000371495	TP63	1	P63_HUMAN	-	-	-9bp 3'_splice_site	rs145959198	-	-	-	-	-	-	het	1
18	3	189456420	C	-TA	ENST00000392460	ENSG00000073282	189349205	189615068	ENSP00000376253	TP63	1	P63_HUMAN	-	-	-9bp 3'_splice_site	rs145959198	-	-	-	-	-	-	het	1
19	3	189456420	C	-TA	ENST00000418709	ENSG00000073282	189349205	189615068	ENSP00000407144	TP63	1	P63_HUMAN	-	-	-9bp 3'_splice_site	rs145959198	-	-	-	-	-	-	het	1
20	3	189456420	C	-TA	ENST00000440651	ENSG00000073282	189349205	189615068	ENSP00000394337	TP63	1	P63_HUMAN	-	-	-9bp 3'_splice_site	rs145959198	-	-	-	-	-	-	het	1

** A friendly reminder: guest user can access up to first 20 entries per gene from MSeqDR Master Exome Data Set M1. To gain access to the full power of MSeqDR, please login, or register, then request access to data.

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Select a dataset from the above drop-down list,
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Transcripts and variants in the surrounding TP63 3:189349205..189615068 region Gbrowse