No. | Chr | Position | Reference | Variant | EnsemblTranscriptID | EnsemblGeneID | Gene_Start | Gene_End | EnsemblProteinID | Gene | strand | Uniprot | cChange | pChange | Nature | dbSNP | Freq | EVS | phastCons | SIFT | Polyphen | HGMD | type | samples |
---|
1 | 6 | 33391270 | T | C | ENST00000293748 | ENSG00000197283 | 33387847 | 33421466 | ENSP00000293748 | SYNGAP1 | 1 | SYGP1_HUMAN | c.84T>C | p.S28S | syn | rs142359891 | - | C=101/T=8499;C=16/T=4390;C=117/T=12889 | lod=456:624 | - | - | - | het | 13 |
2 | 6 | 33391270 | T | C | ENST00000293748 | ENSG00000197283 | 33387847 | 33421466 | ENSP00000293748 | SYNGAP1 | 1 | SYGP1_HUMAN | c.84T>C | p.S28S | syn | rs142359891 | - | C=101/T=8499;C=16/T=4390;C=117/T=12889 | lod=456:624 | - | - | - | hom | 1 |
3 | 6 | 33391270 | T | C | ENST00000418600 | ENSG00000197283 | 33387847 | 33421466 | ENSP00000403636 | SYNGAP1 | 1 | SYGP1_HUMAN | c.84T>C | p.S28S | syn | rs142359891 | - | C=101/T=8499;C=16/T=4390;C=117/T=12889 | lod=456:624 | - | - | - | het | 13 |
4 | 6 | 33391270 | T | C | ENST00000418600 | ENSG00000197283 | 33387847 | 33421466 | ENSP00000403636 | SYNGAP1 | 1 | SYGP1_HUMAN | c.84T>C | p.S28S | syn | rs142359891 | - | C=101/T=8499;C=16/T=4390;C=117/T=12889 | lod=456:624 | - | - | - | hom | 1 |
5 | 6 | 33391270 | T | C | ENST00000449372 | ENSG00000197283 | 33387847 | 33421466 | ENSP00000416519 | SYNGAP1 | 1 | - | c.84T>C | p.S28S | syn | rs142359891 | - | C=101/T=8499;C=16/T=4390;C=117/T=12889 | lod=456:624 | - | - | - | het | 13 |
6 | 6 | 33391270 | T | C | ENST00000449372 | ENSG00000197283 | 33387847 | 33421466 | ENSP00000416519 | SYNGAP1 | 1 | - | c.84T>C | p.S28S | syn | rs142359891 | - | C=101/T=8499;C=16/T=4390;C=117/T=12889 | lod=456:624 | - | - | - | hom | 1 |
7 | 6 | 33391270 | T | C | ENST00000479510 | ENSG00000197283 | 33387847 | 33421466 | - | SYNGAP1 | 1 | - | c.279T>C | p.S93S | syn | rs142359891 | - | C=101/T=8499;C=16/T=4390;C=117/T=12889 | lod=456:624 | - | - | - | het | 13 |
8 | 6 | 33391270 | T | C | ENST00000479510 | ENSG00000197283 | 33387847 | 33421466 | - | SYNGAP1 | 1 | - | c.279T>C | p.S93S | syn | rs142359891 | - | C=101/T=8499;C=16/T=4390;C=117/T=12889 | lod=456:624 | - | - | - | hom | 1 |
9 | 6 | 33391270 | T | C | ENST00000496374 | ENSG00000197283 | 33387847 | 33421466 | - | SYNGAP1 | 1 | - | c.39T>C | p.S13S | syn | rs142359891 | - | C=101/T=8499;C=16/T=4390;C=117/T=12889 | lod=456:624 | - | - | - | het | 13 |
10 | 6 | 33391270 | T | C | ENST00000496374 | ENSG00000197283 | 33387847 | 33421466 | - | SYNGAP1 | 1 | - | c.39T>C | p.S13S | syn | rs142359891 | - | C=101/T=8499;C=16/T=4390;C=117/T=12889 | lod=456:624 | - | - | - | hom | 1 |
11 | 6 | 33391379 | A | -GT | ENST00000293748 | ENSG00000197283 | 33387847 | 33421466 | ENSP00000293748 | SYNGAP1 | 1 | SYGP1_HUMAN | - | - | +4bp 5'_splice_site | NA | - | - | lod=456:624 | - | - | - | het | 1 |
12 | 6 | 33391379 | A | -GT | ENST00000418600 | ENSG00000197283 | 33387847 | 33421466 | ENSP00000403636 | SYNGAP1 | 1 | SYGP1_HUMAN | - | - | +4bp 5'_splice_site | NA | - | - | lod=456:624 | - | - | - | het | 1 |
13 | 6 | 33391379 | A | -GT | ENST00000449372 | ENSG00000197283 | 33387847 | 33421466 | ENSP00000416519 | SYNGAP1 | 1 | - | - | - | +4bp 5'_splice_site | NA | - | - | lod=456:624 | - | - | - | het | 1 |
14 | 6 | 33391379 | A | -GT | ENST00000479510 | ENSG00000197283 | 33387847 | 33421466 | - | SYNGAP1 | 1 | - | - | - | +4bp 5'_splice_site | NA | - | - | lod=456:624 | - | - | - | het | 1 |
15 | 6 | 33391379 | A | -GT | ENST00000496374 | ENSG00000197283 | 33387847 | 33421466 | - | SYNGAP1 | 1 | - | - | - | +4bp 5'_splice_site | NA | - | - | lod=456:624 | - | - | - | het | 1 |
16 | 6 | 33393583 | C | T | ENST00000293748 | ENSG00000197283 | 33387847 | 33421466 | ENSP00000293748 | SYNGAP1 | 1 | SYGP1_HUMAN | c.198C>T | p.P66P | syn | rs73402305 | 0.2007 | T=8/C=8592;T=653/C=3753;T=661/C=12345 | lod=427:616 | - | - | - | het | 3 |
17 | 6 | 33393583 | C | T | ENST00000293748 | ENSG00000197283 | 33387847 | 33421466 | ENSP00000293748 | SYNGAP1 | 1 | SYGP1_HUMAN | c.198C>T | p.P66P | syn | rs73402305 | 0.2007 | T=8/C=8592;T=653/C=3753;T=661/C=12345 | lod=427:616 | - | - | - | hom | 2 |
18 | 6 | 33393583 | C | T | ENST00000418600 | ENSG00000197283 | 33387847 | 33421466 | ENSP00000403636 | SYNGAP1 | 1 | SYGP1_HUMAN | c.198C>T | p.P66P | syn | rs73402305 | 0.2007 | T=8/C=8592;T=653/C=3753;T=661/C=12345 | lod=427:616 | - | - | - | het | 3 |
19 | 6 | 33393583 | C | T | ENST00000418600 | ENSG00000197283 | 33387847 | 33421466 | ENSP00000403636 | SYNGAP1 | 1 | SYGP1_HUMAN | c.198C>T | p.P66P | syn | rs73402305 | 0.2007 | T=8/C=8592;T=653/C=3753;T=661/C=12345 | lod=427:616 | - | - | - | hom | 2 |
20 | 6 | 33393583 | C | T | ENST00000449372 | ENSG00000197283 | 33387847 | 33421466 | ENSP00000416519 | SYNGAP1 | 1 | - | c.198C>T | p.P66P | syn | rs73402305 | 0.2007 | T=8/C=8592;T=653/C=3753;T=661/C=12345 | lod=427:616 | - | - | - | het | 3 |