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Examples Gene: MT-ND1, POLG, Region: M:1-1000 Variant: m.8993T>G, 1:g.10042757T>C rs3888511 MSCV_0000006, ClinVar: RCV000000015, Disease: Leigh syndrome, Phenotype: Retinopathy

MSeqDR Central Portal

MSeqDR Data Summary for the Term DICER1:

Ensembl Gene ID	Associated Gene Name	LSDB Genes	LSDB Variants	clinVar hits	Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID	Description	Chr	Gene Start	Gene End	Strand	Band	Transcript Start bp	Transcript End bp	Associated Gene Name	Associated Transcript Name	Associated Gene DB	Associated Transcript DB	Transcript count	pct GC content	Gene Biotype	Transcript Biotype	Source Gene	Source Transcript	Status gene	Status transcript	EntrezGene ID	HGNC ID	HGNC Symbol	RefSeq mRNA	Seq region id
ENSG00000100697	DICER1	0	0	52	ENSG00000100697	ENST00000343455	ENSP00000343745	dicer 1, ribonuclease type III [Source:HGNC Symbol;Acc:17098]	14	95552565	95624347	-1	q32.13	95552565	95623759	DICER1	DICER1-001	HGNC Symbol	HGNC transcript name	15	38	protein_coding	protein_coding	ensembl_hava	ensembl_hava	KNOWN	KNOWN	23405	17098	DICER1	NM_177438	27520

MSeqDR Master Exome Data Set M1: 532 entries from same gene

No.	Chr	Position	Reference	Variant	EnsemblTranscriptID	EnsemblGeneID	Gene_Start	Gene_End	EnsemblProteinID	Gene	strand	Uniprot	cChange	pChange	Nature	dbSNP	Freq	EVS	phastCons	SIFT	Polyphen	HGMD	type	samples
1	14	95552796	C	T	ENST00000343455	ENSG00000100697	95552565	95624347	ENSP00000343745	DICER1	-1	DICER_HUMAN	-	-	3'_UTR	rs112079219	0.0749	-	lod=106:468	-	-	-	het	3
2	14	95552796	C	T	ENST00000343455	ENSG00000100697	95552565	95624347	ENSP00000343745	DICER1	-1	DICER_HUMAN	-	-	3'_UTR	rs112079219	0.0749	-	lod=106:468	-	-	-	hom	1
3	14	95552796	C	T	ENST00000393063	ENSG00000100697	95552565	95624347	ENSP00000376783	DICER1	-1	DICER_HUMAN	-	-	3'_UTR	rs112079219	0.0749	-	lod=106:468	-	-	-	het	3
4	14	95552796	C	T	ENST00000393063	ENSG00000100697	95552565	95624347	ENSP00000376783	DICER1	-1	DICER_HUMAN	-	-	3'_UTR	rs112079219	0.0749	-	lod=106:468	-	-	-	hom	1
5	14	95552796	C	T	ENST00000526495	ENSG00000100697	95552565	95624347	ENSP00000437256	DICER1	-1	DICER_HUMAN	-	-	3'_UTR	rs112079219	0.0749	-	lod=106:468	-	-	-	het	3
6	14	95552796	C	T	ENST00000526495	ENSG00000100697	95552565	95624347	ENSP00000437256	DICER1	-1	DICER_HUMAN	-	-	3'_UTR	rs112079219	0.0749	-	lod=106:468	-	-	-	hom	1
7	14	95552869	G	T	ENST00000343455	ENSG00000100697	95552565	95624347	ENSP00000343745	DICER1	-1	DICER_HUMAN	-	-	3'_UTR	NA	-	-	lod=38:358	-	-	-	het	1
8	14	95552869	G	T	ENST00000393063	ENSG00000100697	95552565	95624347	ENSP00000376783	DICER1	-1	DICER_HUMAN	-	-	3'_UTR	NA	-	-	lod=38:358	-	-	-	het	1
9	14	95552869	G	T	ENST00000526495	ENSG00000100697	95552565	95624347	ENSP00000437256	DICER1	-1	DICER_HUMAN	-	-	3'_UTR	NA	-	-	lod=38:358	-	-	-	het	1
10	14	95552949	G	A	ENST00000343455	ENSG00000100697	95552565	95624347	ENSP00000343745	DICER1	-1	DICER_HUMAN	-	-	3'_UTR	rs11556997	0.0029	-	-	-	-	-	het	2
11	14	95552949	G	A	ENST00000393063	ENSG00000100697	95552565	95624347	ENSP00000376783	DICER1	-1	DICER_HUMAN	-	-	3'_UTR	rs11556997	0.0029	-	-	-	-	-	het	2
12	14	95552949	G	A	ENST00000526495	ENSG00000100697	95552565	95624347	ENSP00000437256	DICER1	-1	DICER_HUMAN	-	-	3'_UTR	rs11556997	0.0029	-	-	-	-	-	het	2
13	14	95553090	G	C	ENST00000343455	ENSG00000100697	95552565	95624347	ENSP00000343745	DICER1	-1	DICER_HUMAN	-	-	3'_UTR	NA	-	-	lod=34:346	-	-	-	het	3
14	14	95553090	G	C	ENST00000393063	ENSG00000100697	95552565	95624347	ENSP00000376783	DICER1	-1	DICER_HUMAN	-	-	3'_UTR	NA	-	-	lod=34:346	-	-	-	het	3
15	14	95553090	G	C	ENST00000526495	ENSG00000100697	95552565	95624347	ENSP00000437256	DICER1	-1	DICER_HUMAN	-	-	3'_UTR	NA	-	-	lod=34:346	-	-	-	het	3
16	14	95553099	A	C	ENST00000343455	ENSG00000100697	95552565	95624347	ENSP00000343745	DICER1	-1	DICER_HUMAN	-	-	3'_UTR	rs80103767	0.0206	-	lod=178:523	-	-	-	het	7
17	14	95553099	A	C	ENST00000393063	ENSG00000100697	95552565	95624347	ENSP00000376783	DICER1	-1	DICER_HUMAN	-	-	3'_UTR	rs80103767	0.0206	-	lod=178:523	-	-	-	het	7
18	14	95553099	A	C	ENST00000526495	ENSG00000100697	95552565	95624347	ENSP00000437256	DICER1	-1	DICER_HUMAN	-	-	3'_UTR	rs80103767	0.0206	-	lod=178:523	-	-	-	het	7
19	14	95553204	T	C	ENST00000343455	ENSG00000100697	95552565	95624347	ENSP00000343745	DICER1	-1	DICER_HUMAN	-	-	3'_UTR	NA	-	-	-	-	-	-	het	1
20	14	95553204	T	C	ENST00000393063	ENSG00000100697	95552565	95624347	ENSP00000376783	DICER1	-1	DICER_HUMAN	-	-	3'_UTR	NA	-	-	-	-	-	-	het	1

** A friendly reminder: guest user can access up to first 20 entries per gene from MSeqDR Master Exome Data Set M1. To gain access to the full power of MSeqDR, please login, or register, then request access to data.

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Select a dataset from the above drop-down list,
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Transcripts and variants in the surrounding DICER1 14:95552565..95624347 region Gbrowse