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Examples Gene: MT-ND1, POLG, Region: M:1-1000 Variant: m.8993T>G, 1:g.10042757T>C rs3888511 MSCV_0000006, ClinVar: RCV000000015, Disease: Leigh syndrome, Phenotype: Retinopathy

MSeqDR Central Portal

MSeqDR Data Summary for the Term ACADM:

Ensembl Gene ID	Associated Gene Name	LSDB Genes	LSDB Variants	clinVar hits	Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID	Description	Chr	Gene Start	Gene End	Strand	Band	Transcript Start bp	Transcript End bp	Associated Gene Name	Associated Transcript Name	Associated Gene DB	Associated Transcript DB	Transcript count	pct GC content	Gene Biotype	Transcript Biotype	Source Gene	Source Transcript	Status gene	Status transcript	EntrezGene ID	HGNC ID	HGNC Symbol	RefSeq mRNA	Seq region id
ENSG00000117054	ACADM	1	217	120	ENSG00000117054	ENST00000534334	ENSP00000435584	acyl-CoA dehydrogenase, C-4 to C-12 straight chain [Source:HGNC Symbol;Acc:89]	1	76190036	76253260	1	p31.1	76190452	76226933	ACADM	ACADM-010	HGNC Symbol	HGNC transcript name	19	40.45	protein_coding	nonsense_mediated_decay	ensembl_hava	havana	KNOWN	KNOWN	34	89	ACADM		27511

MSeqDR Master Exome Data Set M1: 386 entries from same gene

No.	Chr	Position	Reference	Variant	EnsemblTranscriptID	EnsemblGeneID	Gene_Start	Gene_End	EnsemblProteinID	Gene	strand	Uniprot	cChange	pChange	Nature	dbSNP	Freq	EVS	phastCons	SIFT	Polyphen	HGMD	type	samples
1	1	76190037	C	G	ENST00000370841	ENSG00000117054	76190036	76253260	ENSP00000359878	ACADM	1	ACADM_HUMAN	-	-	5'_UTR	rs114802787	0.0605	-	-	-	-	-	het	1
2	1	76190072	G	A	ENST00000370841	ENSG00000117054	76190036	76253260	ENSP00000359878	ACADM	1	ACADM_HUMAN	-	-	5'_UTR	rs114005461	0.1456	-	-	-	-	-	het	2
3	1	76190081	C	-AG	ENST00000370841	ENSG00000117054	76190036	76253260	ENSP00000359878	ACADM	1	ACADM_HUMAN	-	-	5'_UTR	NA	-	-	-	-	-	-	het	1
4	1	76190106	C	A	ENST00000370841	ENSG00000117054	76190036	76253260	ENSP00000359878	ACADM	1	ACADM_HUMAN	-	-	5'_UTR	NA	-	-	-	-	-	-	het	1
5	1	76190106	C	A	ENST00000370841	ENSG00000117054	76190036	76253260	ENSP00000359878	ACADM	1	ACADM_HUMAN	-	-	5'_UTR	NA	-	-	-	-	-	-	hom	1
6	1	76190111	T	C	ENST00000370841	ENSG00000117054	76190036	76253260	ENSP00000359878	ACADM	1	ACADM_HUMAN	-	-	5'_UTR	rs1251076	0.1961	-	-	-	-	-	hom	1
7	1	76190111	T	C	ENST00000370841	ENSG00000117054	76190036	76253260	ENSP00000359878	ACADM	1	ACADM_HUMAN	-	-	5'_UTR	rs1251076	0.1961	-	-	-	-	-	het	11
8	1	76190186	C	G	ENST00000370841	ENSG00000117054	76190036	76253260	ENSP00000359878	ACADM	1	ACADM_HUMAN	-	-	5'_UTR	NA	-	-	-	-	-	-	het	1
9	1	76190207	C	T	ENST00000370841	ENSG00000117054	76190036	76253260	ENSP00000359878	ACADM	1	ACADM_HUMAN	-	-	5'_UTR	NA	-	-	-	-	-	-	het	1
10	1	76190216	G	A	ENST00000370841	ENSG00000117054	76190036	76253260	ENSP00000359878	ACADM	1	ACADM_HUMAN	-	-	5'_UTR	rs17848068	0.3192	-	-	-	-	-	het	269
11	1	76190216	G	A	ENST00000370841	ENSG00000117054	76190036	76253260	ENSP00000359878	ACADM	1	ACADM_HUMAN	-	-	5'_UTR	rs17848068	0.3192	-	-	-	-	-	hom	58
12	1	76190331	C	G	ENST00000370841	ENSG00000117054	76190036	76253260	ENSP00000359878	ACADM	1	ACADM_HUMAN	-	-	5'_UTR	rs61124994	0.0522	-	-	-	-	-	het	31
13	1	76190331	C	G	ENST00000370841	ENSG00000117054	76190036	76253260	ENSP00000359878	ACADM	1	ACADM_HUMAN	-	-	5'_UTR	rs61124994	0.0522	-	-	-	-	-	hom	1
14	1	76190349	T	+CCCGC	ENST00000370841	ENSG00000117054	76190036	76253260	ENSP00000359878	ACADM	1	ACADM_HUMAN	-	-	5'_UTR	NA	-	-	-	-	-	-	het	1
15	1	76190356	C	G	ENST00000370841	ENSG00000117054	76190036	76253260	ENSP00000359878	ACADM	1	ACADM_HUMAN	-	-	5'_UTR	NA	-	-	-	-	-	-	het	2
16	1	76190439	T	C	ENST00000370834	ENSG00000117054	76190036	76253260	ENSP00000359871	ACADM	1	-	-	-	5'_UTR	rs59932454	0.0839	C=255/T=8345;C=460/T=3946;C=715/T=12291	-	-	-	-	het	51
17	1	76190439	T	C	ENST00000370834	ENSG00000117054	76190036	76253260	ENSP00000359871	ACADM	1	-	-	-	5'_UTR	rs59932454	0.0839	C=255/T=8345;C=460/T=3946;C=715/T=12291	-	-	-	-	hom	1
18	1	76190439	T	C	ENST00000370841	ENSG00000117054	76190036	76253260	ENSP00000359878	ACADM	1	ACADM_HUMAN	-	-	5'_UTR	rs59932454	0.0839	C=255/T=8345;C=460/T=3946;C=715/T=12291	-	-	-	-	het	51
19	1	76190439	T	C	ENST00000370841	ENSG00000117054	76190036	76253260	ENSP00000359878	ACADM	1	ACADM_HUMAN	-	-	5'_UTR	rs59932454	0.0839	C=255/T=8345;C=460/T=3946;C=715/T=12291	-	-	-	-	hom	1
20	1	76190439	T	C	ENST00000525881	ENSG00000117054	76190036	76253260	-	ACADM	1	-	c.64T>C	p.Y22H	non-syn	rs59932454	0.0839	C=255/T=8345;C=460/T=3946;C=715/T=12291	-	-	-	-	het	51

** A friendly reminder: guest user can access up to first 20 entries per gene from MSeqDR Master Exome Data Set M1. To gain access to the full power of MSeqDR, please login, or register, then request access to data.

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Select a dataset from the above drop-down list,
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Transcripts and variants in the surrounding ACADM 1:76190036..76253260 region Gbrowse