Human Phenotype Ontology 
Grandparent Node:
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Morphological central nervous system abnormality (HP:0002011)help
Parent Node:
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Abnormality of neuronal migration (HP:0002269)help
..Starting node
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Gray matter heterotopia (HP:0002282)help
Term ID: 2282
Name: Gray matter heterotopia
Synonym: Gray matter heterotopias; Grey matter heterotopia; Grey matter heterotopias; Heterotopia; Heterotopias; Neuronal heterotopia
Definition: Heterotopia or neuronal heterotopia are macroscopic clusters of misplaced neurons (gray matter), most often situated along the ventricular walls or within the subcortical white matter.
Comments:
Reference: HP:0002282
Genes and Diseases:
 
       Child Nodes:
........expandGray matter heterotopias (HP:0002281) help
................... HP:0007165 Periventricular gray matter heterotopia
........expandWhite matter neuronal heterotopia (HP:0007314) help

 Sister Nodes: 
..expandAbnormal cortical gyration (HP:0002536) help
InputHPO IDHPO termDistanceGeneGene id entrezHGNC IDDiseaseIdDiseaseNameFrequencyOnsetHGMD variantsClinVar variants
 
HPO disease - gene - phenotype typical associations:
 
HPO disease - gene - phenotype less frequent non-typical associations:
HP:0002282HP:0002282Gray matter heterotopia0ADD3 CL E G H120245OMIM:617008Cerebral palsy, spastic quadriplegic, 33
HP:0002282HP:0002282Gray matter heterotopia0ADGRL1 CL E G H2285920973OMIM:620065
HP:0002282HP:0002282Gray matter heterotopia0AKT1 CL E G H207391ORPHA:744Proteus syndromeHP:0040283 - Occasional54
HP:0002282HP:0002282Gray matter heterotopia0AKT3 CL E G H10000393ORPHA:99802HemimegalencephalyHP:0040283 - Occasional19
HP:0002282HP:0002282Gray matter heterotopia0ALG11 CL E G H44013832456ORPHA:280071ALG11-CDGHP:0040283 - Occasional41
HP:0002282HP:0002282Gray matter heterotopia0ANKLE2 CL E G H2314129101ORPHA:2512Autosomal recessive primary microcephalyHP:0040281 - Very frequent3
HP:0002282HP:0002282Gray matter heterotopia0ANKRD11 CL E G H2912321316ORPHA:26125016q24.3 microdeletion syndrome102
HP:0002282HP:0002282Gray matter heterotopia0APC2 CL E G H1029724036OMIM:618677CORTICAL DYSPLASIA, COMPLEX, WITH OTHER BRAIN MALFORMATIONS 10; CDCBM101
HP:0002282HP:0002282Gray matter heterotopia0ARF1 CL E G H375652ORPHA:98892Periventricular nodular heterotopia
HP:0002282HP:0002282Gray matter heterotopia0ARF1 CL E G H375652OMIM:618185Periventricular nodular heterotopia 8
HP:0002282HP:0002282Gray matter heterotopia0ARFGEF2 CL E G H1056415853OMIM:608097Periventricular heterotopia with microcephaly, autosomal recessive179
HP:0002282HP:0002282Gray matter heterotopia0ARFGEF2 CL E G H1056415853ORPHA:98892Periventricular nodular heterotopia179
HP:0002282HP:0002282Gray matter heterotopia0ARMC9 CL E G H8021020730OMIM:617622JOUBERT SYNDROME 30; JBTS30
HP:0002282HP:0002282Gray matter heterotopia0ASPM CL E G H25926619048ORPHA:2512Autosomal recessive primary microcephalyHP:0040281 - Very frequent512
HP:0002282HP:0002282Gray matter heterotopia0ASXL1 CL E G H17102318318OMIM:605039Bohring-Opitz syndrome.145
HP:0002282HP:0002282Gray matter heterotopia0B4GAT1 CL E G H1104115685OMIM:615287MUSCULAR DYSTROPHY-DYSTROGLYCANOPATHY (CONGENITAL WITH BRAIN AND EYE ANOMALIES), TYPE A, 13.17
HP:0002282HP:0002282Gray matter heterotopia0BLTP1 CL E G H8416226953OMIM:617822Alkuraya-Kucinskas syndrome.
HP:0002282HP:0002282Gray matter heterotopia0C2CD3 CL E G H2600524564ORPHA:434179Orofaciodigital syndrome type 1427
HP:0002282HP:0002282Gray matter heterotopia0C2CD3 CL E G H2600524564OMIM:615948Orofaciodigital syndrome XIV27
HP:0002282HP:0002282Gray matter heterotopia0CDH2 CL E G H10001759OMIM:618929AGENESIS OF CORPUS CALLOSUM, CARDIAC, OCULAR, AND GENITAL SYNDROME; ACOGS
HP:0002282HP:0002282Gray matter heterotopia0CDK5RAP2 CL E G H5575518672ORPHA:2512Autosomal recessive primary microcephalyHP:0040281 - Very frequent181
HP:0002282HP:0002282Gray matter heterotopia0CDK6 CL E G H10211777ORPHA:2512Autosomal recessive primary microcephalyHP:0040281 - Very frequent6
HP:0002282HP:0002282Gray matter heterotopia0CENPJ CL E G H5583517272ORPHA:2512Autosomal recessive primary microcephalyHP:0040281 - Very frequent161
HP:0002282HP:0002282Gray matter heterotopia0CEP135 CL E G H966229086ORPHA:2512Autosomal recessive primary microcephalyHP:0040281 - Very frequent38
HP:0002282HP:0002282Gray matter heterotopia0CEP152 CL E G H2299529298ORPHA:2512Autosomal recessive primary microcephalyHP:0040281 - Very frequent146
HP:0002282HP:0002282Gray matter heterotopia0CEP63 CL E G H8025425815ORPHA:2512Autosomal recessive primary microcephalyHP:0040281 - Very frequent31
HP:0002282HP:0002282Gray matter heterotopia0CEP85L CL E G H38711921638OMIM:618873LISSENCEPHALY 10; LIS101
HP:0002282HP:0002282Gray matter heterotopia0CIT CL E G H111131985ORPHA:2512Autosomal recessive primary microcephalyHP:0040281 - Very frequent15
HP:0002282HP:0002282Gray matter heterotopia0COL4A2 CL E G H12842203OMIM:614483PORENCEPHALY 2; POREN2147
HP:0002282HP:0002282Gray matter heterotopia0COPB2 CL E G H92762232ORPHA:2512Autosomal recessive primary microcephalyHP:0040281 - Very frequent
HP:0002282HP:0002282Gray matter heterotopia0CPLANE1 CL E G H6525025801OMIM:277170Orofaciodigital syndrome VI
HP:0002282HP:0002282Gray matter heterotopia0CPLX1 CL E G H108152309ORPHA:352582Familial infantile myoclonic epilepsy1
HP:0002282HP:0002282Gray matter heterotopia0CRB2 CL E G H28620418688OMIM:219730Ventriculomegaly with cystic kidney diseaseHP:0040283 - Occasional12
HP:0002282HP:0002282Gray matter heterotopia0CRPPA CL E G H72992037276ORPHA:370980Congenital muscular dystrophy without intellectual disabilityHP:0040284 - Very rare
HP:0002282HP:0002282Gray matter heterotopia0CRPPA CL E G H72992037276OMIM:614643Muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A, 7.
HP:0002282HP:0002282Gray matter heterotopia0CSF1R CL E G H14362433OMIM:618476Brain abnormalities, neurodegeneration, and dysosteosclerosis149
HP:0002282HP:0002282Gray matter heterotopia0CSGALNACT1 CL E G H5579024290OMIM:618870SKELETAL DYSPLASIA, MILD, WITH JOINT LAXITY AND ADVANCED BONE AGE; SDJLABA
HP:0002282HP:0002282Gray matter heterotopia0DCHS1 CL E G H864213681ORPHA:314679Cerebrofacioarticular syndromeHP:0040283 - Occasional27
HP:0002282HP:0002282Gray matter heterotopia0DCHS1 CL E G H864213681OMIM:601390Van maldergem syndrome 1.27
HP:0002282HP:0002282Gray matter heterotopia0DCX CL E G H16412714OMIM:300067Lissencephaly, X-linked, 1.145
HP:0002282HP:0002282Gray matter heterotopia0DHCR7 CL E G H17172860OMIM:270400Smith-Lemli-Opitz syndrome159
HP:0002282HP:0002282Gray matter heterotopia0DHX16 CL E G H84492739OMIM:618733NEUROMUSCULAR OCULOAUDITORY SYNDROME; NMOAS
HP:0002282HP:0002282Gray matter heterotopia0EML1 CL E G H20093330OMIM:600348Band heterotopia.3
HP:0002282HP:0002282Gray matter heterotopia0EPG5 CL E G H5772429331OMIM:242840Vici syndrome.40
HP:0002282HP:0002282Gray matter heterotopia0EPG5 CL E G H5772429331ORPHA:1493Vici syndromeHP:0040282 - Frequent40
HP:0002282HP:0002282Gray matter heterotopia0ERMARD CL E G H5578021056ORPHA:758576q terminal deletion syndromeHP:0040281 - Very frequent36
HP:0002282HP:0002282Gray matter heterotopia0ERMARD CL E G H5578021056ORPHA:98892Periventricular nodular heterotopia36
HP:0002282HP:0002282Gray matter heterotopia0ERMARD CL E G H5578021056OMIM:615544Periventricular nodular heterotopia 6.36
HP:0002282HP:0002282Gray matter heterotopia0FAT4 CL E G H7963323109ORPHA:314679Cerebrofacioarticular syndromeHP:0040283 - Occasional114
HP:0002282HP:0002282Gray matter heterotopia0FAT4 CL E G H7963323109OMIM:615546Van maldergem syndrome 2.114
HP:0002282HP:0002282Gray matter heterotopia0FGFR3 CL E G H22613690ORPHA:1860Thanatophoric dysplasia type 1HP:0040283 - Occasional145
HP:0002282HP:0002282Gray matter heterotopia0FGFR3 CL E G H22613690OMIM:187600Thanatophoric dysplasia, type I.145
HP:0002282HP:0002282Gray matter heterotopia0FKRP CL E G H7914717997ORPHA:370959Congenital muscular dystrophy with cerebellar involvementHP:0040282 - Frequent157
HP:0002282HP:0002282Gray matter heterotopia0FKRP CL E G H7914717997ORPHA:370980Congenital muscular dystrophy without intellectual disabilityHP:0040284 - Very rare157
HP:0002282HP:0002282Gray matter heterotopia0FKTN CL E G H22183622ORPHA:370980Congenital muscular dystrophy without intellectual disabilityHP:0040284 - Very rare184
HP:0002282HP:0002282Gray matter heterotopia0FLNA CL E G H23163754ORPHA:555877FLNA-related X-linked myxomatous valvular dysplasia493
HP:0002282HP:0002282Gray matter heterotopia0FLNA CL E G H23163754OMIM:300049Heterotopia, periventricular, X-linked dominant.493
HP:0002282HP:0002282Gray matter heterotopia0FLNA CL E G H23163754ORPHA:98892Periventricular nodular heterotopia493
HP:0002282HP:0002282Gray matter heterotopia0FMR1 CL E G H23323775OMIM:300624Fragile X mental retardation syndrome30
HP:0002282HP:0002282Gray matter heterotopia0GMPPB CL E G H2992522932ORPHA:370959Congenital muscular dystrophy with cerebellar involvementHP:0040282 - Frequent34
HP:0002282HP:0002282Gray matter heterotopia0GPSM2 CL E G H2989929501OMIM:604213CHUDLEY-MCCULLOUGH SYNDROME; CMCS74
HP:0002282HP:0002282Gray matter heterotopia0HNRNPK CL E G H31905044ORPHA:352665Neurodevelopmental disorder-craniofacial dysmorphism-cardiac defect-skeletal anomalies syndrome due to 9q21.3 microdeletionHP:0040282 - Frequent8
HP:0002282HP:0002282Gray matter heterotopia0HNRNPK CL E G H31905044ORPHA:453504Neurodevelopmental disorder-craniofacial dysmorphism-cardiac defect-skeletal anomalies syndrome due to a point mutationHP:0040282 - Frequent8
HP:0002282HP:0002282Gray matter heterotopia0HYLS1 CL E G H21984426558OMIM:236680Hydrolethalus syndrome 1.31
HP:0002282HP:0002282Gray matter heterotopia0INTS8 CL E G H5565626048OMIM:618572NEURODEVELOPMENTAL DISORDER WITH CEREBELLAR HYPOPLASIA AND SPASTICITY; NEDCHS2
HP:0002282HP:0002282Gray matter heterotopia0KANSL1 CL E G H28405824565OMIM:610443Koolen-De Vries syndrome.283
HP:0002282HP:0002282Gray matter heterotopia0KAT6B CL E G H2352217582OMIM:606170Genitopatellar syndrome141
HP:0002282HP:0002282Gray matter heterotopia0KAT8 CL E G H8414817933OMIM:618974LI-GHORBANI-WEISZ-HUBSHMAN SYNDROME; LIGOWS
HP:0002282HP:0002282Gray matter heterotopia0KATNB1 CL E G H103006217OMIM:616212Lissencephaly 6, with microcephaly10
HP:0002282HP:0002282Gray matter heterotopia0KIF14 CL E G H992819181ORPHA:2512Autosomal recessive primary microcephalyHP:0040281 - Very frequent9
HP:0002282HP:0002282Gray matter heterotopia0KIF2A CL E G H37966318OMIM:615411Cortical dysplasia, complex, with other brain malformations 3.15
HP:0002282HP:0002282Gray matter heterotopia0KNL1 CL E G H5708224054ORPHA:2512Autosomal recessive primary microcephalyHP:0040281 - Very frequent112
HP:0002282HP:0002282Gray matter heterotopia0LAMA1 CL E G H2842176481OMIM:615960Poretti-Boltshauser syndrome.35
HP:0002282HP:0002282Gray matter heterotopia0LAMB1 CL E G H39126486ORPHA:352682Cobblestone lissencephaly without muscular or ocular involvementHP:0040282 - Frequent71
HP:0002282HP:0002282Gray matter heterotopia0LAMB1 CL E G H39126486OMIM:615191Lissencephaly 571
HP:0002282HP:0002282Gray matter heterotopia0LMBRD2 CL E G H9225525287OMIM:619694DEVELOPMENTAL DELAY WITH VARIABLE NEUROLOGIC AND BRAIN ABNORMALITIES; DENBA
HP:0002282HP:0002282Gray matter heterotopia0MAN1B1 CL E G H112536823ORPHA:397941MAN1B1-CDG93
HP:0002282HP:0002282Gray matter heterotopia0MAN2C1 CL E G H41236827OMIM:619775CONGENITAL DISORDER OF DEGLYCOSYLATION 2; CDDG2
HP:0002282HP:0002282Gray matter heterotopia0MAP1B CL E G H41316836ORPHA:98892Periventricular nodular heterotopia
HP:0002282HP:0002282Gray matter heterotopia0MAP1B CL E G H41316836OMIM:618918PERIVENTRICULAR NODULAR HETEROTOPIA 9; PVNH9
HP:0002282HP:0002282Gray matter heterotopia0MCM7 CL E G H41766950ORPHA:2512Autosomal recessive primary microcephalyHP:0040281 - Very frequent
HP:0002282HP:0002282Gray matter heterotopia0MCPH1 CL E G H796486954ORPHA:2512Autosomal recessive primary microcephalyHP:0040281 - Very frequent155
HP:0002282HP:0002282Gray matter heterotopia0MED12 CL E G H996811957OMIM:305450Opitz-Kaveggia syndrome.228
HP:0002282HP:0002282Gray matter heterotopia0METTL5 CL E G H2908125006ORPHA:2512Autosomal recessive primary microcephalyHP:0040281 - Very frequent
HP:0002282HP:0002282Gray matter heterotopia0MFSD2A CL E G H8487925897ORPHA:2512Autosomal recessive primary microcephalyHP:0040281 - Very frequent5
HP:0002282HP:0002282Gray matter heterotopia0MLH1 CL E G H42927127OMIM:276300Mismatch repair cancer syndrome 11819
HP:0002282HP:0002282Gray matter heterotopia0MPDZ CL E G H87777208OMIM:615219Hydrocephalus, congenital, 2, with or without brain or eye anomalies.29
HP:0002282HP:0002282Gray matter heterotopia0MTOR CL E G H24753942ORPHA:99802HemimegalencephalyHP:0040283 - Occasional68
HP:0002282HP:0002282Gray matter heterotopia0NCAPD3 CL E G H2331028952ORPHA:2512Autosomal recessive primary microcephalyHP:0040281 - Very frequent1
HP:0002282HP:0002282Gray matter heterotopia0NEDD4L CL E G H233277728ORPHA:98892Periventricular nodular heterotopia30
HP:0002282HP:0002282Gray matter heterotopia0NEDD4L CL E G H233277728OMIM:617201Periventricular nodular heterotopia 7.30
HP:0002282HP:0002282Gray matter heterotopia0NRCAM CL E G H48977994OMIM:6198332
HP:0002282HP:0002282Gray matter heterotopia0OFD1 CL E G H84812567OMIM:311200Orofaciodigital syndrome I.201
HP:0002282HP:0002282Gray matter heterotopia0PAFAH1B1 CL E G H50488574OMIM:607432Lissencephaly 1.231
HP:0002282HP:0002282Gray matter heterotopia0PDHB CL E G H51628808ORPHA:255138Pyruvate dehydrogenase E1-beta deficiency37
HP:0002282HP:0002282Gray matter heterotopia0PEX1 CL E G H51898850OMIM:214100Peroxisome biogenesis disorder 1A (Zellweger).169
HP:0002282HP:0002282Gray matter heterotopia0PHC1 CL E G H19113182ORPHA:2512Autosomal recessive primary microcephalyHP:0040281 - Very frequent16
HP:0002282HP:0002282Gray matter heterotopia0PIK3CA CL E G H52908975ORPHA:99802HemimegalencephalyHP:0040283 - Occasional162
HP:0002282HP:0002282Gray matter heterotopia0PLCH1 CL E G H2300729185OMIM:619895
HP:0002282HP:0002282Gray matter heterotopia0PMS2 CL E G H53959122OMIM:619101MISMATCH REPAIR CANCER SYNDROME 4; MMRCS41121
HP:0002282HP:0002282Gray matter heterotopia0POMGNT1 CL E G H5562419139ORPHA:370959Congenital muscular dystrophy with cerebellar involvementHP:0040282 - Frequent180
HP:0002282HP:0002282Gray matter heterotopia0POMK CL E G H8419726267ORPHA:370959Congenital muscular dystrophy with cerebellar involvementHP:0040282 - Frequent18
HP:0002282HP:0002282Gray matter heterotopia0POMT1 CL E G H105859202ORPHA:370959Congenital muscular dystrophy with cerebellar involvementHP:0040282 - Frequent213
HP:0002282HP:0002282Gray matter heterotopia0POMT1 CL E G H105859202ORPHA:370980Congenital muscular dystrophy without intellectual disabilityHP:0040284 - Very rare213
HP:0002282HP:0002282Gray matter heterotopia0POMT2 CL E G H2995419743ORPHA:370959Congenital muscular dystrophy with cerebellar involvementHP:0040282 - Frequent221
HP:0002282HP:0002282Gray matter heterotopia0PPFIBP1 CL E G H84969249OMIM:620024
HP:0002282HP:0002282Gray matter heterotopia0PPP1R12A CL E G H46597618OMIM:618820GENITOURINARY AND/OR BRAIN MALFORMATION SYNDROME; GUBS
HP:0002282HP:0002282Gray matter heterotopia0PRORP CL E G H969219958OMIM:619737COMBINED OXIDATIVE PHOSPHORYLATION DEFICIENCY 54; COXPD54
HP:0002282HP:0002282Gray matter heterotopia0PTEN CL E G H57289588ORPHA:744Proteus syndromeHP:0040283 - Occasional948
HP:0002282HP:0002282Gray matter heterotopia0PYCR2 CL E G H2992030262ORPHA:2512Autosomal recessive primary microcephalyHP:0040281 - Very frequent11
HP:0002282HP:0002282Gray matter heterotopia0RALGAPA1 CL E G H25395917770OMIM:618797NEURODEVELOPMENTAL DISORDER WITH HYPOTONIA, NEONATAL RESPIRATORY INSUFFICIENCY, AND THERMODYSREGULATION; NEDHRIT1
HP:0002282HP:0002282Gray matter heterotopia0RNU4ATAC CL E G H10015168334016OMIM:210710Microcephalic osteodysplastic primordial dwarfism, type I.15
HP:0002282HP:0002282Gray matter heterotopia0RTTN CL E G H2591418654ORPHA:468631Microcephalic cortical malformations-short stature due to RTTN deficiency113
HP:0002282HP:0002282Gray matter heterotopia0SASS6 CL E G H16378625403ORPHA:2512Autosomal recessive primary microcephalyHP:0040281 - Very frequent4
HP:0002282HP:0002282Gray matter heterotopia0SLC25A24 CL E G H2995720662OMIM:612289Fontaine progeroid syndrome.
HP:0002282HP:0002282Gray matter heterotopia0SPEN CL E G H2301317575OMIM:619312RADIO-TARTAGLIA SYNDROME; RATARS4
HP:0002282HP:0002282Gray matter heterotopia0STIL CL E G H649110879ORPHA:2512Autosomal recessive primary microcephalyHP:0040281 - Very frequent99
HP:0002282HP:0002282Gray matter heterotopia0TAF13 CL E G H688411546ORPHA:2512Autosomal recessive primary microcephalyHP:0040281 - Very frequent2
HP:0002282HP:0002282Gray matter heterotopia0TBC1D24 CL E G H5746529203ORPHA:352582Familial infantile myoclonic epilepsy271
HP:0002282HP:0002282Gray matter heterotopia0TMEM107 CL E G H8431428128OMIM:617563Orofaciodigital syndrome XVI.4
HP:0002282HP:0002282Gray matter heterotopia0TMTC3 CL E G H16041826899ORPHA:98892Periventricular nodular heterotopia5
HP:0002282HP:0002282Gray matter heterotopia0TRAPPC10 CL E G H710911868ORPHA:2512Autosomal recessive primary microcephalyHP:0040281 - Very frequent1
HP:0002282HP:0002282Gray matter heterotopia0TRAPPC14 CL E G H5526225604ORPHA:2512Autosomal recessive primary microcephalyHP:0040281 - Very frequent
HP:0002282HP:0002282Gray matter heterotopia0TUBA1A CL E G H784620766OMIM:611603Lissencephaly 3.106
HP:0002282HP:0002282Gray matter heterotopia0TUBB CL E G H20306820778OMIM:615771Cortical dysplasia, complex, with other brain malformations 614
HP:0002282HP:0002282Gray matter heterotopia0TUBB2B CL E G H34773330829ORPHA:300573Polymicrogyria due to TUBB2B mutationHP:0040283 - Occasional39
HP:0002282HP:0002282Gray matter heterotopia0TUBG1 CL E G H728312417OMIM:615412Cortical dysplasia, complex, with other brain malformations 4.14
HP:0002282HP:0002282Gray matter heterotopia0TUBGCP2 CL E G H1084418599OMIM:618737PACHYGYRIA, MICROCEPHALY, DEVELOPMENTAL DELAY, AND DYSMORPHIC FACIES, WITH OR WITHOUT SEIZURES; PAMDDFS
HP:0002282HP:0002282Gray matter heterotopia0USP18 CL E G H1127412616OMIM:617397Pseudo-Torch syndrome 2.2
HP:0002282HP:0002282Gray matter heterotopia0VPS35L CL E G H5702024641OMIM:619135RITSCHER-SCHINZEL SYNDROME 3; RTSC3
HP:0002282HP:0002282Gray matter heterotopia0WDR62 CL E G H28440324502ORPHA:2512Autosomal recessive primary microcephalyHP:0040281 - Very frequent224
HP:0002282HP:0002282Gray matter heterotopia0WDR62 CL E G H28440324502OMIM:604317Microcephaly 2, primary, autosomal recessive, with or without cortical malformations.224
HP:0002282HP:0002282Gray matter heterotopia0ZEB2 CL E G H983914881ORPHA:261552Mowat-Wilson syndrome due to a ZEB2 point mutation362
HP:0002282HP:0002282Gray matter heterotopia0ZEB2 CL E G H983914881ORPHA:261537Mowat-Wilson syndrome due to monosomy 2q22362
HP:0002282HP:0002282Gray matter heterotopia0ZMIZ1 CL E G H5717816493OMIM:618659NEURODEVELOPMENTAL DISORDER WITH DYSMORPHIC FACIES AND DISTAL SKELETAL ANOMALIES; NEDDFSA
HP:0002282HP:0002282Gray matter heterotopia0ZNF292 CL E G H2303618410OMIM:619188INTELLECTUAL DEVELOPMENTAL DISORDER, AUTOSOMAL DOMINANT 64; MRD643
HP:0002282HP:0002282Gray matter heterotopia0ZSWIM6 CL E G H5768829316OMIM:603671Acromelic frontonasal dysostosis.5
HP:0002282HP:0007165Periventricular heterotopia1ADGRL1 CL E G H2285920973OMIM:620065
HP:0002282HP:0007165Periventricular heterotopia1ANKRD11 CL E G H2912321316ORPHA:26125016q24.3 microdeletion syndromeHP:0040282 - Frequent102
HP:0002282HP:0007165Periventricular heterotopia1APC2 CL E G H1029724036OMIM:618677CORTICAL DYSPLASIA, COMPLEX, WITH OTHER BRAIN MALFORMATIONS 10; CDCBM101
HP:0002282HP:0007165Periventricular heterotopia1ARF1 CL E G H375652ORPHA:98892Periventricular nodular heterotopiaHP:0040282 - Frequent
HP:0002282HP:0007165Periventricular heterotopia1ARF1 CL E G H375652OMIM:618185Periventricular nodular heterotopia 8
HP:0002282HP:0007165Periventricular heterotopia1ARFGEF2 CL E G H1056415853OMIM:608097Periventricular heterotopia with microcephaly, autosomal recessive179
HP:0002282HP:0007165Periventricular heterotopia1ARFGEF2 CL E G H1056415853ORPHA:98892Periventricular nodular heterotopiaHP:0040282 - Frequent179
HP:0002282HP:0007165Periventricular heterotopia1C2CD3 CL E G H2600524564ORPHA:434179Orofaciodigital syndrome type 14HP:0040282 - Frequent27
HP:0002282HP:0007165Periventricular heterotopia1C2CD3 CL E G H2600524564OMIM:615948Orofaciodigital syndrome XIV.27
HP:0002282HP:0007165Periventricular heterotopia1CDH2 CL E G H10001759OMIM:618929AGENESIS OF CORPUS CALLOSUM, CARDIAC, OCULAR, AND GENITAL SYNDROME; ACOGS
HP:0002282HP:0032391Subcortical heterotopia1CEP85L CL E G H38711921638OMIM:618873LISSENCEPHALY 10; LIS101
HP:0002282HP:0032391Subcortical heterotopia1COL4A2 CL E G H12842203OMIM:614483PORENCEPHALY 2; POREN2147
HP:0002282HP:0007165Periventricular heterotopia1CPLANE1 CL E G H6525025801OMIM:277170Orofaciodigital syndrome VI
HP:0002282HP:0007165Periventricular heterotopia1CPLX1 CL E G H108152309ORPHA:352582Familial infantile myoclonic epilepsy1
HP:0002282HP:0032391Subcortical heterotopia1CRPPA CL E G H72992037276OMIM:614643Muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A, 7.
HP:0002282HP:0007165Periventricular heterotopia1CSF1R CL E G H14362433OMIM:618476Brain abnormalities, neurodegeneration, and dysosteosclerosis.149
HP:0002282HP:0007165Periventricular heterotopia1CSGALNACT1 CL E G H5579024290OMIM:618870SKELETAL DYSPLASIA, MILD, WITH JOINT LAXITY AND ADVANCED BONE AGE; SDJLABA
HP:0002282HP:0032391Subcortical heterotopia1DCHS1 CL E G H864213681OMIM:601390Van maldergem syndrome 127
HP:0002282HP:0007165Periventricular heterotopia1DCHS1 CL E G H864213681OMIM:601390Van maldergem syndrome 127
HP:0002282HP:0007165Periventricular heterotopia1DHCR7 CL E G H17172860OMIM:270400Smith-Lemli-Opitz syndrome159
HP:0002282HP:0007165Periventricular heterotopia1DHX16 CL E G H84492739OMIM:618733NEUROMUSCULAR OCULOAUDITORY SYNDROME; NMOAS
HP:0002282HP:0032391Subcortical heterotopia1EML1 CL E G H20093330OMIM:600348Band heterotopia3
HP:0002282HP:0007165Periventricular heterotopia1ERMARD CL E G H5578021056ORPHA:758576q terminal deletion syndromeHP:0040281 - Very frequent36
HP:0002282HP:0007165Periventricular heterotopia1ERMARD CL E G H5578021056ORPHA:98892Periventricular nodular heterotopiaHP:0040282 - Frequent36
HP:0002282HP:0007165Periventricular heterotopia1ERMARD CL E G H5578021056OMIM:615544Periventricular nodular heterotopia 636
HP:0002282HP:0007165Periventricular heterotopia1FAT4 CL E G H7963323109OMIM:615546Van maldergem syndrome 2114
HP:0002282HP:0032391Subcortical heterotopia1FAT4 CL E G H7963323109OMIM:615546Van maldergem syndrome 2114
HP:0002282HP:0007165Periventricular heterotopia1FLNA CL E G H23163754ORPHA:555877FLNA-related X-linked myxomatous valvular dysplasia493
HP:0002282HP:0007165Periventricular heterotopia1FLNA CL E G H23163754ORPHA:98892Periventricular nodular heterotopiaHP:0040282 - Frequent493
HP:0002282HP:0007165Periventricular heterotopia1FMR1 CL E G H23323775OMIM:300624Fragile X mental retardation syndrome.30
HP:0002282HP:0007165Periventricular heterotopia1INTS8 CL E G H5565626048OMIM:618572NEURODEVELOPMENTAL DISORDER WITH CEREBELLAR HYPOPLASIA AND SPASTICITY; NEDCHS2
HP:0002282HP:0007165Periventricular heterotopia1KAT6B CL E G H2352217582OMIM:606170Genitopatellar syndrome.141
HP:0002282HP:0007165Periventricular heterotopia1KAT8 CL E G H8414817933OMIM:618974LI-GHORBANI-WEISZ-HUBSHMAN SYNDROME; LIGOWS
HP:0002282HP:0007165Periventricular heterotopia1KATNB1 CL E G H103006217OMIM:616212Lissencephaly 6, with microcephaly10
HP:0002282HP:0032391Subcortical heterotopia1KIF2A CL E G H37966318OMIM:615411Cortical dysplasia, complex, with other brain malformations 315
HP:0002282HP:0032391Subcortical heterotopia1LAMB1 CL E G H39126486OMIM:615191Lissencephaly 571
HP:0002282HP:0007165Periventricular heterotopia1MAN1B1 CL E G H112536823ORPHA:397941MAN1B1-CDGHP:0040284 - Very rare93
HP:0002282HP:0007165Periventricular heterotopia1MAP1B CL E G H41316836ORPHA:98892Periventricular nodular heterotopiaHP:0040282 - Frequent
HP:0002282HP:0007165Periventricular heterotopia1MAP1B CL E G H41316836OMIM:618918PERIVENTRICULAR NODULAR HETEROTOPIA 9; PVNH9
HP:0002282HP:0007165Periventricular heterotopia1NEDD4L CL E G H233277728ORPHA:98892Periventricular nodular heterotopiaHP:0040282 - Frequent30
HP:0002282HP:0007165Periventricular heterotopia1NEDD4L CL E G H233277728OMIM:617201Periventricular nodular heterotopia 730
HP:0002282HP:0007165Periventricular heterotopia1NRCAM CL E G H48977994OMIM:6198332
HP:0002282HP:0032391Subcortical heterotopia1PAFAH1B1 CL E G H50488574OMIM:607432Lissencephaly 1231
HP:0002282HP:0007165Periventricular heterotopia1PDHB CL E G H51628808ORPHA:255138Pyruvate dehydrogenase E1-beta deficiencyHP:0040283 - Occasional37
HP:0002282HP:0007165Periventricular heterotopia1PLCH1 CL E G H2300729185OMIM:619895
HP:0002282HP:0007165Periventricular heterotopia1PRORP CL E G H969219958OMIM:619737COMBINED OXIDATIVE PHOSPHORYLATION DEFICIENCY 54; COXPD54
HP:0002282HP:0007165Periventricular heterotopia1RTTN CL E G H2591418654ORPHA:468631Microcephalic cortical malformations-short stature due to RTTN deficiencyHP:0040283 - Occasional113
HP:0002282HP:0007165Periventricular heterotopia1SLC25A24 CL E G H2995720662OMIM:612289Fontaine progeroid syndrome
HP:0002282HP:0007165Periventricular heterotopia1TBC1D24 CL E G H5746529203ORPHA:352582Familial infantile myoclonic epilepsy271
HP:0002282HP:0007165Periventricular heterotopia1TMTC3 CL E G H16041826899ORPHA:98892Periventricular nodular heterotopiaHP:0040282 - Frequent5
HP:0002282HP:0032391Subcortical heterotopia1TUBB CL E G H20306820778OMIM:615771Cortical dysplasia, complex, with other brain malformations 614
HP:0002282HP:0032391Subcortical heterotopia1TUBG1 CL E G H728312417OMIM:615412Cortical dysplasia, complex, with other brain malformations 414
HP:0002282HP:0032391Subcortical heterotopia1TUBGCP2 CL E G H1084418599OMIM:618737PACHYGYRIA, MICROCEPHALY, DEVELOPMENTAL DELAY, AND DYSMORPHIC FACIES, WITH OR WITHOUT SEIZURES; PAMDDFS
HP:0002282HP:0007165Periventricular heterotopia1VPS35L CL E G H5702024641OMIM:619135RITSCHER-SCHINZEL SYNDROME 3; RTSC3
HP:0002282HP:0007165Periventricular heterotopia1ZEB2 CL E G H983914881ORPHA:261552Mowat-Wilson syndrome due to a ZEB2 point mutationHP:0040284 - Very rare362
HP:0002282HP:0007165Periventricular heterotopia1ZEB2 CL E G H983914881ORPHA:261537Mowat-Wilson syndrome due to monosomy 2q22HP:0040284 - Very rare362
HP:0002282HP:0007165Periventricular heterotopia1ZMIZ1 CL E G H5717816493OMIM:618659NEURODEVELOPMENTAL DISORDER WITH DYSMORPHIC FACIES AND DISTAL SKELETAL ANOMALIES; NEDDFSA
HP:0002282HP:0007165Periventricular heterotopia1ZNF292 CL E G H2303618410OMIM:619188INTELLECTUAL DEVELOPMENTAL DISORDER, AUTOSOMAL DOMINANT 64; MRD643
HP:0002282HP:0007165Periventricular heterotopia1ZSWIM6 CL E G H5768829316OMIM:603671Acromelic frontonasal dysostosis5
HP:0002282HP:0032393Diffuse ribbon-like subcortical heterotopia2 CL E G H
HP:0002282HP:0032392Nodular subcortical heterotopia in peritrigonal regions2 CL E G H
HP:0002282HP:0032389Periventricular laminar heterotopia2 CL E G H
HP:0002282HP:0032396Transmantle columnar heterotopia2 CL E G H
HP:0002282HP:0032395Curvilinear subcortical heterotopia2 CL E G H
HP:0002282HP:0032394Mesial parasagittal subcortical heterotopia2 CL E G H
HP:0002282HP:0032388Periventricular nodular heterotopia2ADGRL1 CL E G H2285920973OMIM:620065
HP:0002282HP:0032390Periventricular ribbonlike heterotopia2APC2 CL E G H1029724036OMIM:618677CORTICAL DYSPLASIA, COMPLEX, WITH OTHER BRAIN MALFORMATIONS 10; CDCBM101
HP:0002282HP:0032388Periventricular nodular heterotopia2ARF1 CL E G H375652OMIM:618185Periventricular nodular heterotopia 8.
HP:0002282HP:0032388Periventricular nodular heterotopia2ARFGEF2 CL E G H1056415853OMIM:608097Periventricular heterotopia with microcephaly, autosomal recessive.179
HP:0002282HP:0032409Subcortical band heterotopia2CEP85L CL E G H38711921638OMIM:618873LISSENCEPHALY 10; LIS101
HP:0002282HP:0032388Periventricular nodular heterotopia2CPLANE1 CL E G H6525025801OMIM:277170Orofaciodigital syndrome VI
HP:0002282HP:0032388Periventricular nodular heterotopia2CPLX1 CL E G H108152309ORPHA:352582Familial infantile myoclonic epilepsyHP:0040283 - Occasional1
HP:0002282HP:0032388Periventricular nodular heterotopia2DCHS1 CL E G H864213681OMIM:601390Van maldergem syndrome 1.27
HP:0002282HP:0032409Subcortical band heterotopia2DCHS1 CL E G H864213681OMIM:601390Van maldergem syndrome 1.27
HP:0002282HP:0032409Subcortical band heterotopia2EML1 CL E G H20093330OMIM:600348Band heterotopia.3
HP:0002282HP:0032388Periventricular nodular heterotopia2ERMARD CL E G H5578021056OMIM:615544Periventricular nodular heterotopia 6.36
HP:0002282HP:0032409Subcortical band heterotopia2FAT4 CL E G H7963323109OMIM:615546Van maldergem syndrome 2.114
HP:0002282HP:0032388Periventricular nodular heterotopia2FAT4 CL E G H7963323109OMIM:615546Van maldergem syndrome 2.114
HP:0002282HP:0032388Periventricular nodular heterotopia2FLNA CL E G H23163754ORPHA:555877FLNA-related X-linked myxomatous valvular dysplasia493
HP:0002282HP:0032388Periventricular nodular heterotopia2INTS8 CL E G H5565626048OMIM:618572NEURODEVELOPMENTAL DISORDER WITH CEREBELLAR HYPOPLASIA AND SPASTICITY; NEDCHS2
HP:0002282HP:0032409Subcortical band heterotopia2KIF2A CL E G H37966318OMIM:615411Cortical dysplasia, complex, with other brain malformations 3.15
HP:0002282HP:0032409Subcortical band heterotopia2LAMB1 CL E G H39126486OMIM:615191Lissencephaly 5.71
HP:0002282HP:0032388Periventricular nodular heterotopia2MAP1B CL E G H41316836OMIM:618918PERIVENTRICULAR NODULAR HETEROTOPIA 9; PVNH9
HP:0002282HP:0032388Periventricular nodular heterotopia2NEDD4L CL E G H233277728OMIM:617201Periventricular nodular heterotopia 7.30
HP:0002282HP:0032409Subcortical band heterotopia2PAFAH1B1 CL E G H50488574OMIM:607432Lissencephaly 1.231
HP:0002282HP:0032388Periventricular nodular heterotopia2PRORP CL E G H969219958OMIM:619737COMBINED OXIDATIVE PHOSPHORYLATION DEFICIENCY 54; COXPD54
HP:0002282HP:0032388Periventricular nodular heterotopia2TBC1D24 CL E G H5746529203ORPHA:352582Familial infantile myoclonic epilepsyHP:0040283 - Occasional271
HP:0002282HP:0032409Subcortical band heterotopia2TUBB CL E G H20306820778OMIM:615771Cortical dysplasia, complex, with other brain malformations 614
HP:0002282HP:0032409Subcortical band heterotopia2TUBG1 CL E G H728312417OMIM:615412Cortical dysplasia, complex, with other brain malformations 4.14
HP:0002282HP:0032409Subcortical band heterotopia2TUBGCP2 CL E G H1084418599OMIM:618737PACHYGYRIA, MICROCEPHALY, DEVELOPMENTAL DELAY, AND DYSMORPHIC FACIES, WITH OR WITHOUT SEIZURES; PAMDDFS
HP:0002282HP:0032388Periventricular nodular heterotopia2VPS35L CL E G H5702024641OMIM:619135RITSCHER-SCHINZEL SYNDROME 3; RTSC3
HP:0002282HP:0032388Periventricular nodular heterotopia2ZMIZ1 CL E G H5717816493OMIM:618659NEURODEVELOPMENTAL DISORDER WITH DYSMORPHIC FACIES AND DISTAL SKELETAL ANOMALIES; NEDDFSA
HP:0002282HP:0032388Periventricular nodular heterotopia2ZNF292 CL E G H2303618410OMIM:619188INTELLECTUAL DEVELOPMENTAL DISORDER, AUTOSOMAL DOMINANT 64; MRD643
HP:0002282HP:0032388Periventricular nodular heterotopia2ZSWIM6 CL E G H5768829316OMIM:603671Acromelic frontonasal dysostosis.5
HP:0002282HP:0032413Diffuse subcortical band heterotopia3 CL E G H
HP:0002282HP:0032412Anterior predominant subcortical band heterotopia3 CL E G H
HP:0002282HP:0032411Posterior predominant subcortical band heterotopia3CEP85L CL E G H38711921638OMIM:618873LISSENCEPHALY 10; LIS101


Genes (117) :ADD3 ADGRL1 AKT1 AKT3 ALG11 ANKLE2 ANKRD11 APC2 ARF1 ARFGEF2 ARMC9 ASPM ASXL1 B4GAT1 BLTP1 C2CD3 CDH2 CDK5RAP2 CDK6 CENPJ CEP135 CEP152 CEP63 CEP85L CIT COL4A2 COPB2 CPLANE1 CPLX1 CRB2 CRPPA CSF1R CSGALNACT1 DCHS1 DCX DHCR7 DHX16 EML1 EPG5 ERMARD FAT4 FGFR3 FKRP FKTN FLNA FMR1 GMPPB GPSM2 HNRNPK HYLS1 INTS8 KANSL1 KAT6B KAT8 KATNB1 KIF14 KIF2A KNL1 LAMA1 LAMB1 LMBRD2 MAN1B1 MAN2C1 MAP1B MCM7 MCPH1 MED12 METTL5 MFSD2A MLH1 MPDZ MTOR NCAPD3 NEDD4L NRCAM OFD1 PAFAH1B1 PDHB PEX1 PHC1 PIK3CA PLCH1 PMS2 POMGNT1 POMK POMT1 POMT2 PPFIBP1 PPP1R12A PRORP PTEN PYCR2 RALGAPA1 RNU4ATAC RTTN SASS6 SLC25A24 SPEN STIL TAF13 TBC1D24 TMEM107 TMTC3 TRAPPC10 TRAPPC14 TUBA1A TUBB TUBB2B TUBG1 TUBGCP2 USP18 VPS35L WDR62 ZEB2 ZMIZ1 ZNF292 ZSWIM6

Diseases (94) :OMIM:617008 OMIM:620065 ORPHA:744 ORPHA:99802 ORPHA:280071 ORPHA:2512 ORPHA:261250 OMIM:618677 ORPHA:98892 OMIM:618185 OMIM:608097 OMIM:617622 OMIM:605039 OMIM:615287 OMIM:617822 ORPHA:434179 OMIM:615948 OMIM:618929 OMIM:618873 OMIM:614483 OMIM:277170 ORPHA:352582 OMIM:219730 ORPHA:370980 OMIM:614643 OMIM:618476 OMIM:618870 ORPHA:314679 OMIM:601390 OMIM:300067 OMIM:270400 OMIM:618733 OMIM:600348 OMIM:242840 ORPHA:1493 ORPHA:75857 OMIM:615544 OMIM:615546 ORPHA:1860 OMIM:187600 ORPHA:370959 ORPHA:555877 OMIM:300049 OMIM:300624 OMIM:604213 ORPHA:352665 ORPHA:453504 OMIM:236680 OMIM:618572 OMIM:610443 OMIM:606170 OMIM:618974 OMIM:616212 OMIM:615411 OMIM:615960 ORPHA:352682 OMIM:615191 OMIM:619694 ORPHA:397941 OMIM:619775 OMIM:618918 OMIM:305450 OMIM:276300 OMIM:615219 OMIM:617201 OMIM:619833 OMIM:311200 OMIM:607432 ORPHA:255138 OMIM:214100 OMIM:619895 OMIM:619101 OMIM:620024 OMIM:618820 OMIM:619737 OMIM:618797 OMIM:210710 ORPHA:468631 OMIM:612289 OMIM:619312 OMIM:617563 OMIM:611603 OMIM:615771 ORPHA:300573 OMIM:615412 OMIM:618737 OMIM:617397 OMIM:619135 OMIM:604317 ORPHA:261552 ORPHA:261537 OMIM:618659 OMIM:619188 OMIM:603671
 

Human Phenotype Ontology(HPO) is developed by the Human Phenotype Ontology Consortium. The version used here is December 15 2022 release.