Human Phenotype Ontology 
Grandparent Node:
expand
Morphological central nervous system abnormality (HP:0002011)help
Parent Node:
expand
Abnormality of brain morphology (HP:0012443)help
..Starting node
..expand
Iron accumulation in brain (HP:0012675)help
Term ID: 12675
Name: Iron accumulation in brain
Synonym: Brain iron deposition; Iron accumulation in brain
Definition: An abnormal build up of iron (Fe) in brain tissue.
Comments:
Reference: HP:0012675
Genes and Diseases:
 
       Child Nodes:
........expandIron accumulation in globus pallidus (HP:0012677) help
........expandIron accumulation in substantia nigra (HP:0012678) help

 Sister Nodes: 
..expandAbnormal brainstem morphology (HP:0002363) help
..expandAbnormal cerebral vascular morphology (HP:0100659) help
..expandAbnormal cerebral ventricle morphology (HP:0002118) help
..expandAbnormal forebrain morphology (HP:0100547) help
..expandAbnormal hindbrain morphology (HP:0011282) help
..expandAbnormal midbrain morphology (HP:0002418) help
..expandAbnormal pineal morphology (HP:0012681) help
..expandAbnormality of the pituitary gland (HP:0012503) help
..expandCopper accumulation in brain (HP:0012676) help
..expandHoloprosencephaly (HP:0001360) help
..expandKernicterus (HP:0001343) help
..expandobsolete Brain very small (HP:0001322) help
InputHPO IDHPO termDistanceGeneGene id entrezHGNC IDDiseaseIdDiseaseNameFrequencyOnsetHGMD variantsClinVar variants
 
HPO disease - gene - phenotype typical associations:
 
HPO disease - gene - phenotype less frequent non-typical associations:
HP:0012675HP:0012675Iron accumulation in brain0C19ORF12 CL E G H8363625443OMIM:614298Neurodegeneration with brain iron accumulation 4114
HP:0012675HP:0012675Iron accumulation in brain0COASY CL E G H8034729932ORPHA:397725COASY protein-associated neurodegeneration16
HP:0012675HP:0012675Iron accumulation in brain0CP CL E G H13562295ORPHA:48818AceruloplasminemiaHP:0040283 - Occasional115
HP:0012675HP:0012675Iron accumulation in brain0CRAT CL E G H13842342OMIM:617917Neurodegeneration with brain iron accumulation 8
HP:0012675HP:0012675Iron accumulation in brain0DLAT CL E G H17372896ORPHA:79244Pyruvate dehydrogenase E2 deficiency82
HP:0012675HP:0012675Iron accumulation in brain0FA2H CL E G H7915221197ORPHA:171629Autosomal recessive spastic paraplegia type 3576
HP:0012675HP:0012675Iron accumulation in brain0FTL CL E G H25123999ORPHA:157846NeuroferritinopathyHP:0040281 - Very frequent33
HP:0012675HP:0012675Iron accumulation in brain0NUDT2 CL E G H3188049OMIM:619844
HP:0012675HP:0012675Iron accumulation in brain0PANK2 CL E G H8002515894ORPHA:216866Classic pantothenate kinase-associated neurodegenerationHP:0040282 - Frequent55
HP:0012675HP:0012675Iron accumulation in brain0PANK2 CL E G H8002515894OMIM:607236Hypoprebetalipoproteinemia, acanthocytosis, retinitis pigmentosa,and pallidal degeneration55
HP:0012675HP:0012675Iron accumulation in brain0PANK2 CL E G H8002515894OMIM:234200Neurodegeneration with brain iron accumulation 155
HP:0012675HP:0012675Iron accumulation in brain0PIGA CL E G H52778957OMIM:301072NEURODEVELOPMENTAL DISORDER WITH EPILEPSY AND HEMOCHROMATOSIS; NEDEPH46
HP:0012675HP:0012675Iron accumulation in brain0PLA2G6 CL E G H83989039ORPHA:199351Adult-onset dystonia-parkinsonismHP:0040283 - Occasional133
HP:0012675HP:0012675Iron accumulation in brain0PLA2G6 CL E G H83989039ORPHA:35069Infantile neuroaxonal dystrophyHP:0040282 - Frequent133
HP:0012675HP:0012675Iron accumulation in brain0PLA2G6 CL E G H83989039OMIM:256600Neurodegeneration with brain iron accumulation 2A133
HP:0012675HP:0012675Iron accumulation in brain0TBCE CL E G H690511582ORPHA:496756Early-onset progressive encephalopathy-spastic ataxia-distal spinal muscular atrophy syndrome52
HP:0012675HP:0012675Iron accumulation in brain0VPS13A CL E G H232301908ORPHA:2388ChoreoacanthocytosisHP:0040284 - Very rare130
HP:0012675HP:0012675Iron accumulation in brain0VPS41 CL E G H2707212713OMIM:619389SPINOCEREBELLAR ATAXIA, AUTOSOMAL RECESSIVE 29; SCAR29
HP:0012675HP:0012675Iron accumulation in brain0WDR45 CL E G H1115228912ORPHA:329284Beta-propeller protein-associated neurodegenerationHP:0040282 - Frequent51
HP:0012675HP:0002454Eye of the tiger anomaly of globus pallidus1C19ORF12 CL E G H8363625443OMIM:614298Neurodegeneration with brain iron accumulation 4114
HP:0012675HP:0002454Eye of the tiger anomaly of globus pallidus1COASY CL E G H8034729932ORPHA:397725COASY protein-associated neurodegenerationHP:0040281 - Very frequent16
HP:0012675HP:0002454Eye of the tiger anomaly of globus pallidus1DLAT CL E G H17372896ORPHA:79244Pyruvate dehydrogenase E2 deficiencyHP:0040282 - Frequent82
HP:0012675HP:0002454Eye of the tiger anomaly of globus pallidus1FA2H CL E G H7915221197ORPHA:171629Autosomal recessive spastic paraplegia type 3576
HP:0012675HP:0012678Iron accumulation in substantia nigra1FTL CL E G H25123999ORPHA:157846NeuroferritinopathyHP:0040282 - Frequent33
HP:0012675HP:0002454Eye of the tiger anomaly of globus pallidus1FTL CL E G H25123999ORPHA:157846Neuroferritinopathy33
HP:0012675HP:0002454Eye of the tiger anomaly of globus pallidus1NUDT2 CL E G H3188049OMIM:619844
HP:0012675HP:0002454Eye of the tiger anomaly of globus pallidus1PANK2 CL E G H8002515894ORPHA:216866Classic pantothenate kinase-associated neurodegenerationHP:0040282 - Frequent55
HP:0012675HP:0002454Eye of the tiger anomaly of globus pallidus1PANK2 CL E G H8002515894OMIM:607236Hypoprebetalipoproteinemia, acanthocytosis, retinitis pigmentosa,and pallidal degeneration.55
HP:0012675HP:0002454Eye of the tiger anomaly of globus pallidus1PANK2 CL E G H8002515894OMIM:234200Neurodegeneration with brain iron accumulation 1.55
HP:0012675HP:0002454Eye of the tiger anomaly of globus pallidus1PLA2G6 CL E G H83989039ORPHA:35069Infantile neuroaxonal dystrophy133
HP:0012675HP:0012678Iron accumulation in substantia nigra1TBCE CL E G H690511582ORPHA:496756Early-onset progressive encephalopathy-spastic ataxia-distal spinal muscular atrophy syndromeHP:0040283 - Occasional52
HP:0012675HP:0002454Eye of the tiger anomaly of globus pallidus1VPS41 CL E G H2707212713OMIM:619389SPINOCEREBELLAR ATAXIA, AUTOSOMAL RECESSIVE 29; SCAR29
HP:0012675HP:0012678Iron accumulation in substantia nigra1VPS41 CL E G H2707212713OMIM:619389SPINOCEREBELLAR ATAXIA, AUTOSOMAL RECESSIVE 29; SCAR29
HP:0012675HP:0012678Iron accumulation in substantia nigra1WDR45 CL E G H1115228912ORPHA:329284Beta-propeller protein-associated neurodegenerationHP:0040282 - Frequent51


Genes (15) :C19ORF12 COASY CP CRAT DLAT FA2H FTL NUDT2 PANK2 PIGA PLA2G6 TBCE VPS13A VPS41 WDR45

Diseases (19) :OMIM:614298 ORPHA:397725 ORPHA:48818 OMIM:617917 ORPHA:79244 ORPHA:171629 ORPHA:157846 OMIM:619844 ORPHA:216866 OMIM:607236 OMIM:234200 OMIM:301072 ORPHA:199351 ORPHA:35069 OMIM:256600 ORPHA:496756 ORPHA:2388 OMIM:619389 ORPHA:329284
 

Human Phenotype Ontology(HPO) is developed by the Human Phenotype Ontology Consortium. The version used here is December 15 2022 release.