Human Phenotype Ontology 
Grandparent Node:
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Abnormality of the respiratory system (HP:0002086)help
Parent Node:
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Abnormal respiratory system morphology (HP:0012252)help
..Starting node
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Abnormal respiratory epithelium morphology (HP:0012253)help
Term ID: 12253
Name: Abnormal respiratory epithelium morphology
Synonym:
Definition: Any structural anomaly of the pseudostratified ciliated epithelium that lines much of the conducting portion of the airway, including part of the nasal cavity and larynx, the trachea, and bronchi.
Comments:
Reference: HP:0012253
Genes and Diseases:
 
       Child Nodes:
........expandAbnormal respiratory motile cilium morphology (HP:0005938) help
................... HP:0012255 Dynein arm defect of respiratory motile cilia
................... HP:0012258 Abnormal axonemal organization of respiratory motile cilia
................... HP:0012260 Abnormal central microtubular pair morphology of respiratory motile cilia
................... HP:0012264 Absent central microtubular pair morphology of respiratory motile cilia
................... HP:0012267 Absent respiratory ciliary axoneme radial spokes
........expandEctopic respiratory mucosa (HP:0100241) help

 Sister Nodes: 
..expandAbnormal lung morphology (HP:0002088) help
..expandAbnormal pulmonary situs morphology (HP:0011615) help
..expandAbnormality of the upper respiratory tract (HP:0002087) help
InputHPO IDHPO termDistanceGeneGene id entrezHGNC IDDiseaseIdDiseaseNameFrequencyOnsetHGMD variantsClinVar variants
 
HPO disease - gene - phenotype typical associations:
 
HPO disease - gene - phenotype less frequent non-typical associations:
HP:0012253HP:0012253Abnormal respiratory epithelium morphology0ARMC2 CL E G H8407123045OMIM:618433SPERMATOGENIC FAILURE 38; SPGF38
HP:0012253HP:0012253Abnormal respiratory epithelium morphology0CCDC103 CL E G H38838932700OMIM:614679Ciliary dyskinesia, primary, 1736
HP:0012253HP:0012253Abnormal respiratory epithelium morphology0CCDC39 CL E G H33982925244OMIM:613807Ciliary dyskinesia, primary, 14126
HP:0012253HP:0012253Abnormal respiratory epithelium morphology0CCDC40 CL E G H5503626090OMIM:613808CILIARY DYSKINESIA, PRIMARY, 15; CILD15182
HP:0012253HP:0012253Abnormal respiratory epithelium morphology0CFAP298 CL E G H566831301OMIM:615500Ciliary dyskinesia, primary, 26
HP:0012253HP:0012253Abnormal respiratory epithelium morphology0CFAP300 CL E G H8501628188OMIM:618063Ciliary dyskinesia, primary, 38
HP:0012253HP:0012253Abnormal respiratory epithelium morphology0DNAAF1 CL E G H12387230539OMIM:613193Ciliary dyskinesia, primary, 13116
HP:0012253HP:0012253Abnormal respiratory epithelium morphology0DNAAF11 CL E G H2363916725OMIM:614935Ciliary dyskinesia, primary, 19
HP:0012253HP:0012253Abnormal respiratory epithelium morphology0DNAAF2 CL E G H5517220188OMIM:612518CILIARY DYSKINESIA, PRIMARY, 10; CILD1078
HP:0012253HP:0012253Abnormal respiratory epithelium morphology0DNAAF3 CL E G H35290930492OMIM:606763Ciliary dyskinesia, primary, 263
HP:0012253HP:0012253Abnormal respiratory epithelium morphology0DNAAF5 CL E G H5491926013OMIM:614874Ciliary dyskinesia, primary, 1862
HP:0012253HP:0012253Abnormal respiratory epithelium morphology0DNAH9 CL E G H17702953OMIM:618300Ciliary dyskinesia, primary, 4018
HP:0012253HP:0012253Abnormal respiratory epithelium morphology0DNAI1 CL E G H270192954OMIM:244400Ciliary dyskinesia, primary, 173
HP:0012253HP:0012253Abnormal respiratory epithelium morphology0DNAI2 CL E G H6444618744OMIM:612444CILIARY DYSKINESIA, PRIMARY, 9; CILD9104
HP:0012253HP:0012253Abnormal respiratory epithelium morphology0DNAJB13 CL E G H37440730718OMIM:617091CILIARY DYSKINESIA, PRIMARY, 34; CILD342
HP:0012253HP:0012253Abnormal respiratory epithelium morphology0DNAL1 CL E G H8354423247OMIM:614017CILIARY DYSKINESIA, PRIMARY, 16; CILD16167
HP:0012253HP:0012253Abnormal respiratory epithelium morphology0NME5 CL E G H83827853OMIM:620032
HP:0012253HP:0012253Abnormal respiratory epithelium morphology0NME8 CL E G H5131416473OMIM:610852Ciliary dyskinesia, primary, 650
HP:0012253HP:0012253Abnormal respiratory epithelium morphology0ODAD1 CL E G H9323326560OMIM:615067Ciliary dyskinesia, primary, 20
HP:0012253HP:0012253Abnormal respiratory epithelium morphology0ODAD3 CL E G H11594828303OMIM:616037Ciliary dyskinesia, primary, 30
HP:0012253HP:0012253Abnormal respiratory epithelium morphology0RSPH3 CL E G H8386121054OMIM:616481Ciliary dyskinesia, primary, 325
HP:0012253HP:0012253Abnormal respiratory epithelium morphology0RSPH4A CL E G H34589521558OMIM:612649Ciliary dyskinesia, primary, 1158
HP:0012253HP:0012253Abnormal respiratory epithelium morphology0RSPH9 CL E G H22142121057OMIM:612650CILIARY DYSKINESIA, PRIMARY, 12; CILD1220
HP:0012253HP:0012253Abnormal respiratory epithelium morphology0SPAG1 CL E G H667411212OMIM:615505Ciliary dyskinesia, primary, 2845
HP:0012253HP:0012253Abnormal respiratory epithelium morphology0TTC12 CL E G H5497023700OMIM:618801CILIARY DYSKINESIA, PRIMARY, 45; CILD45
HP:0012253HP:0012253Abnormal respiratory epithelium morphology0ZMYND10 CL E G H5136419412OMIM:615444Ciliary dyskinesia, primary, 2220
HP:0012253HP:0100241Ectopic respiratory mucosa1 CL E G H
HP:0012253HP:0005938Abnormal respiratory motile cilium morphology1ARMC2 CL E G H8407123045OMIM:618433SPERMATOGENIC FAILURE 38; SPGF38
HP:0012253HP:0005938Abnormal respiratory motile cilium morphology1CCDC103 CL E G H38838932700OMIM:614679Ciliary dyskinesia, primary, 17.36
HP:0012253HP:0005938Abnormal respiratory motile cilium morphology1CCDC39 CL E G H33982925244OMIM:613807Ciliary dyskinesia, primary, 14126
HP:0012253HP:0005938Abnormal respiratory motile cilium morphology1CCDC40 CL E G H5503626090OMIM:613808CILIARY DYSKINESIA, PRIMARY, 15; CILD15182
HP:0012253HP:0005938Abnormal respiratory motile cilium morphology1CFAP298 CL E G H566831301OMIM:615500Ciliary dyskinesia, primary, 26
HP:0012253HP:0005938Abnormal respiratory motile cilium morphology1CFAP300 CL E G H8501628188OMIM:618063Ciliary dyskinesia, primary, 38
HP:0012253HP:0005938Abnormal respiratory motile cilium morphology1DNAAF1 CL E G H12387230539OMIM:613193Ciliary dyskinesia, primary, 13116
HP:0012253HP:0005938Abnormal respiratory motile cilium morphology1DNAAF11 CL E G H2363916725OMIM:614935Ciliary dyskinesia, primary, 19
HP:0012253HP:0005938Abnormal respiratory motile cilium morphology1DNAAF2 CL E G H5517220188OMIM:612518CILIARY DYSKINESIA, PRIMARY, 10; CILD1078
HP:0012253HP:0005938Abnormal respiratory motile cilium morphology1DNAAF3 CL E G H35290930492OMIM:606763Ciliary dyskinesia, primary, 263
HP:0012253HP:0005938Abnormal respiratory motile cilium morphology1DNAAF5 CL E G H5491926013OMIM:614874Ciliary dyskinesia, primary, 1862
HP:0012253HP:0005938Abnormal respiratory motile cilium morphology1DNAH9 CL E G H17702953OMIM:618300Ciliary dyskinesia, primary, 4018
HP:0012253HP:0005938Abnormal respiratory motile cilium morphology1DNAI1 CL E G H270192954OMIM:244400Ciliary dyskinesia, primary, 1.73
HP:0012253HP:0005938Abnormal respiratory motile cilium morphology1DNAI2 CL E G H6444618744OMIM:612444CILIARY DYSKINESIA, PRIMARY, 9; CILD9104
HP:0012253HP:0005938Abnormal respiratory motile cilium morphology1DNAJB13 CL E G H37440730718OMIM:617091CILIARY DYSKINESIA, PRIMARY, 34; CILD342
HP:0012253HP:0005938Abnormal respiratory motile cilium morphology1DNAL1 CL E G H8354423247OMIM:614017CILIARY DYSKINESIA, PRIMARY, 16; CILD16167
HP:0012253HP:0005938Abnormal respiratory motile cilium morphology1NME5 CL E G H83827853OMIM:620032
HP:0012253HP:0005938Abnormal respiratory motile cilium morphology1NME8 CL E G H5131416473OMIM:610852Ciliary dyskinesia, primary, 650
HP:0012253HP:0005938Abnormal respiratory motile cilium morphology1ODAD1 CL E G H9323326560OMIM:615067Ciliary dyskinesia, primary, 20
HP:0012253HP:0005938Abnormal respiratory motile cilium morphology1ODAD3 CL E G H11594828303OMIM:616037Ciliary dyskinesia, primary, 30
HP:0012253HP:0005938Abnormal respiratory motile cilium morphology1RSPH3 CL E G H8386121054OMIM:616481Ciliary dyskinesia, primary, 325
HP:0012253HP:0005938Abnormal respiratory motile cilium morphology1RSPH4A CL E G H34589521558OMIM:612649Ciliary dyskinesia, primary, 1158
HP:0012253HP:0005938Abnormal respiratory motile cilium morphology1RSPH9 CL E G H22142121057OMIM:612650CILIARY DYSKINESIA, PRIMARY, 12; CILD1220
HP:0012253HP:0005938Abnormal respiratory motile cilium morphology1SPAG1 CL E G H667411212OMIM:615505Ciliary dyskinesia, primary, 2845
HP:0012253HP:0005938Abnormal respiratory motile cilium morphology1TTC12 CL E G H5497023700OMIM:618801CILIARY DYSKINESIA, PRIMARY, 45; CILD45
HP:0012253HP:0005938Abnormal respiratory motile cilium morphology1ZMYND10 CL E G H5136419412OMIM:615444Ciliary dyskinesia, primary, 2220
HP:0012253HP:0012258Abnormal axonemal organization of respiratory motile cilia2ARMC2 CL E G H8407123045OMIM:618433SPERMATOGENIC FAILURE 38; SPGF38
HP:0012253HP:0012255Dynein arm defect of respiratory motile cilia2CCDC39 CL E G H33982925244OMIM:613807Ciliary dyskinesia, primary, 14126
HP:0012253HP:0012258Abnormal axonemal organization of respiratory motile cilia2CCDC39 CL E G H33982925244OMIM:613807Ciliary dyskinesia, primary, 14126
HP:0012253HP:0012258Abnormal axonemal organization of respiratory motile cilia2CCDC40 CL E G H5503626090OMIM:613808CILIARY DYSKINESIA, PRIMARY, 15; CILD15182
HP:0012253HP:0012255Dynein arm defect of respiratory motile cilia2CFAP298 CL E G H566831301OMIM:615500Ciliary dyskinesia, primary, 26
HP:0012253HP:0012255Dynein arm defect of respiratory motile cilia2CFAP300 CL E G H8501628188OMIM:618063Ciliary dyskinesia, primary, 38
HP:0012253HP:0012255Dynein arm defect of respiratory motile cilia2DNAAF1 CL E G H12387230539OMIM:613193Ciliary dyskinesia, primary, 13116
HP:0012253HP:0012255Dynein arm defect of respiratory motile cilia2DNAAF11 CL E G H2363916725OMIM:614935Ciliary dyskinesia, primary, 19
HP:0012253HP:0012255Dynein arm defect of respiratory motile cilia2DNAAF3 CL E G H35290930492OMIM:606763Ciliary dyskinesia, primary, 263
HP:0012253HP:0012255Dynein arm defect of respiratory motile cilia2DNAAF5 CL E G H5491926013OMIM:614874Ciliary dyskinesia, primary, 1862
HP:0012253HP:0012255Dynein arm defect of respiratory motile cilia2DNAH9 CL E G H17702953OMIM:618300Ciliary dyskinesia, primary, 4018
HP:0012253HP:0012255Dynein arm defect of respiratory motile cilia2DNAI1 CL E G H270192954OMIM:244400Ciliary dyskinesia, primary, 173
HP:0012253HP:0012255Dynein arm defect of respiratory motile cilia2DNAI2 CL E G H6444618744OMIM:612444CILIARY DYSKINESIA, PRIMARY, 9; CILD9104
HP:0012253HP:0012264Absent central microtubular pair morphology of respiratory motile cilia2DNAJB13 CL E G H37440730718OMIM:617091CILIARY DYSKINESIA, PRIMARY, 34; CILD342
HP:0012253HP:0012255Dynein arm defect of respiratory motile cilia2DNAL1 CL E G H8354423247OMIM:614017CILIARY DYSKINESIA, PRIMARY, 16; CILD16167
HP:0012253HP:0012264Absent central microtubular pair morphology of respiratory motile cilia2NME5 CL E G H83827853OMIM:620032
HP:0012253HP:0012255Dynein arm defect of respiratory motile cilia2NME8 CL E G H5131416473OMIM:610852Ciliary dyskinesia, primary, 650
HP:0012253HP:0012255Dynein arm defect of respiratory motile cilia2ODAD1 CL E G H9323326560OMIM:615067Ciliary dyskinesia, primary, 20
HP:0012253HP:0012255Dynein arm defect of respiratory motile cilia2ODAD3 CL E G H11594828303OMIM:616037Ciliary dyskinesia, primary, 30
HP:0012253HP:0012267Absent respiratory ciliary axoneme radial spokes2RSPH3 CL E G H8386121054OMIM:616481Ciliary dyskinesia, primary, 325
HP:0012253HP:0012260Abnormal central microtubular pair morphology of respiratory motile cilia2RSPH4A CL E G H34589521558OMIM:612649Ciliary dyskinesia, primary, 11.58
HP:0012253HP:0012260Abnormal central microtubular pair morphology of respiratory motile cilia2RSPH9 CL E G H22142121057OMIM:612650CILIARY DYSKINESIA, PRIMARY, 12; CILD1220
HP:0012253HP:0012255Dynein arm defect of respiratory motile cilia2SPAG1 CL E G H667411212OMIM:615505Ciliary dyskinesia, primary, 2845
HP:0012253HP:0012255Dynein arm defect of respiratory motile cilia2TTC12 CL E G H5497023700OMIM:618801CILIARY DYSKINESIA, PRIMARY, 45; CILD45
HP:0012253HP:0012255Dynein arm defect of respiratory motile cilia2ZMYND10 CL E G H5136419412OMIM:615444Ciliary dyskinesia, primary, 2220
HP:0012253HP:0200106Absent/shortened dynein arms3CCDC39 CL E G H33982925244OMIM:613807Ciliary dyskinesia, primary, 14126
HP:0012253HP:0200106Absent/shortened dynein arms3CFAP298 CL E G H566831301OMIM:615500Ciliary dyskinesia, primary, 26
HP:0012253HP:0200106Absent/shortened dynein arms3CFAP300 CL E G H8501628188OMIM:618063Ciliary dyskinesia, primary, 38
HP:0012253HP:0200106Absent/shortened dynein arms3DNAAF1 CL E G H12387230539OMIM:613193Ciliary dyskinesia, primary, 13116
HP:0012253HP:0200106Absent/shortened dynein arms3DNAAF11 CL E G H2363916725OMIM:614935Ciliary dyskinesia, primary, 19
HP:0012253HP:0200106Absent/shortened dynein arms3DNAAF3 CL E G H35290930492OMIM:606763Ciliary dyskinesia, primary, 263
HP:0012253HP:0200106Absent/shortened dynein arms3DNAAF5 CL E G H5491926013OMIM:614874Ciliary dyskinesia, primary, 1862
HP:0012253HP:0200106Absent/shortened dynein arms3DNAH9 CL E G H17702953OMIM:618300Ciliary dyskinesia, primary, 4018
HP:0012253HP:0200106Absent/shortened dynein arms3DNAI1 CL E G H270192954OMIM:244400Ciliary dyskinesia, primary, 173
HP:0012253HP:0200106Absent/shortened dynein arms3DNAI2 CL E G H6444618744OMIM:612444CILIARY DYSKINESIA, PRIMARY, 9; CILD9104
HP:0012253HP:0200106Absent/shortened dynein arms3DNAL1 CL E G H8354423247OMIM:614017CILIARY DYSKINESIA, PRIMARY, 16; CILD16167
HP:0012253HP:0200106Absent/shortened dynein arms3NME8 CL E G H5131416473OMIM:610852Ciliary dyskinesia, primary, 650
HP:0012253HP:0200106Absent/shortened dynein arms3ODAD1 CL E G H9323326560OMIM:615067Ciliary dyskinesia, primary, 20
HP:0012253HP:0200106Absent/shortened dynein arms3ODAD3 CL E G H11594828303OMIM:616037Ciliary dyskinesia, primary, 30
HP:0012253HP:0200106Absent/shortened dynein arms3TTC12 CL E G H5497023700OMIM:618801CILIARY DYSKINESIA, PRIMARY, 45; CILD45
HP:0012253HP:0200106Absent/shortened dynein arms3ZMYND10 CL E G H5136419412OMIM:615444Ciliary dyskinesia, primary, 2220
HP:0012253HP:0200108Shortened outer dynein arms4 CL E G H
HP:0012253HP:0200107Shortened inner dynein arms4 CL E G H
HP:0012253HP:0012257Absent inner dynein arms4CCDC39 CL E G H33982925244OMIM:613807Ciliary dyskinesia, primary, 14126
HP:0012253HP:0012256Absent outer dynein arms4CFAP298 CL E G H566831301OMIM:615500Ciliary dyskinesia, primary, 26
HP:0012253HP:0012257Absent inner dynein arms4CFAP300 CL E G H8501628188OMIM:618063Ciliary dyskinesia, primary, 38
HP:0012253HP:0012256Absent outer dynein arms4CFAP300 CL E G H8501628188OMIM:618063Ciliary dyskinesia, primary, 38
HP:0012253HP:0012257Absent inner dynein arms4DNAAF1 CL E G H12387230539OMIM:613193Ciliary dyskinesia, primary, 13.116
HP:0012253HP:0012256Absent outer dynein arms4DNAAF1 CL E G H12387230539OMIM:613193Ciliary dyskinesia, primary, 13.116
HP:0012253HP:0012257Absent inner dynein arms4DNAAF11 CL E G H2363916725OMIM:614935Ciliary dyskinesia, primary, 19
HP:0012253HP:0012256Absent outer dynein arms4DNAAF11 CL E G H2363916725OMIM:614935Ciliary dyskinesia, primary, 19
HP:0012253HP:0012256Absent outer dynein arms4DNAAF3 CL E G H35290930492OMIM:606763Ciliary dyskinesia, primary, 263
HP:0012253HP:0012257Absent inner dynein arms4DNAAF3 CL E G H35290930492OMIM:606763Ciliary dyskinesia, primary, 263
HP:0012253HP:0012256Absent outer dynein arms4DNAAF5 CL E G H5491926013OMIM:614874Ciliary dyskinesia, primary, 18.62
HP:0012253HP:0012256Absent outer dynein arms4DNAH9 CL E G H17702953OMIM:618300Ciliary dyskinesia, primary, 4018
HP:0012253HP:0012256Absent outer dynein arms4DNAI1 CL E G H270192954OMIM:244400Ciliary dyskinesia, primary, 173
HP:0012253HP:0012256Absent outer dynein arms4DNAI2 CL E G H6444618744OMIM:612444CILIARY DYSKINESIA, PRIMARY, 9; CILD9104
HP:0012253HP:0012256Absent outer dynein arms4DNAL1 CL E G H8354423247OMIM:614017CILIARY DYSKINESIA, PRIMARY, 16; CILD16167
HP:0012253HP:0200109Absent/shortened outer dynein arms4NME8 CL E G H5131416473OMIM:610852Ciliary dyskinesia, primary, 6.50
HP:0012253HP:0012256Absent outer dynein arms4ODAD1 CL E G H9323326560OMIM:615067Ciliary dyskinesia, primary, 20.
HP:0012253HP:0012256Absent outer dynein arms4ODAD3 CL E G H11594828303OMIM:616037Ciliary dyskinesia, primary, 30.
HP:0012253HP:0012256Absent outer dynein arms4TTC12 CL E G H5497023700OMIM:618801CILIARY DYSKINESIA, PRIMARY, 45; CILD45
HP:0012253HP:0012257Absent inner dynein arms4TTC12 CL E G H5497023700OMIM:618801CILIARY DYSKINESIA, PRIMARY, 45; CILD45
HP:0012253HP:0012257Absent inner dynein arms4ZMYND10 CL E G H5136419412OMIM:615444Ciliary dyskinesia, primary, 2220
HP:0012253HP:0012256Absent outer dynein arms4ZMYND10 CL E G H5136419412OMIM:615444Ciliary dyskinesia, primary, 2220
HP:0012253HP:0012259Absent inner and outer dynein arms5CFAP300 CL E G H8501628188OMIM:618063Ciliary dyskinesia, primary, 38.
HP:0012253HP:0012259Absent inner and outer dynein arms5DNAAF11 CL E G H2363916725OMIM:614935Ciliary dyskinesia, primary, 19.
HP:0012253HP:0012259Absent inner and outer dynein arms5DNAAF3 CL E G H35290930492OMIM:606763Ciliary dyskinesia, primary, 263
HP:0012253HP:0012259Absent inner and outer dynein arms5TTC12 CL E G H5497023700OMIM:618801CILIARY DYSKINESIA, PRIMARY, 45; CILD45
HP:0012253HP:0012259Absent inner and outer dynein arms5ZMYND10 CL E G H5136419412OMIM:615444Ciliary dyskinesia, primary, 22.20


Genes (26) :ARMC2 CCDC103 CCDC39 CCDC40 CFAP298 CFAP300 DNAAF1 DNAAF11 DNAAF2 DNAAF3 DNAAF5 DNAH9 DNAI1 DNAI2 DNAJB13 DNAL1 NME5 NME8 ODAD1 ODAD3 RSPH3 RSPH4A RSPH9 SPAG1 TTC12 ZMYND10

Diseases (26) :OMIM:618433 OMIM:614679 OMIM:613807 OMIM:613808 OMIM:615500 OMIM:618063 OMIM:613193 OMIM:614935 OMIM:612518 OMIM:606763 OMIM:614874 OMIM:618300 OMIM:244400 OMIM:612444 OMIM:617091 OMIM:614017 OMIM:620032 OMIM:610852 OMIM:615067 OMIM:616037 OMIM:616481 OMIM:612649 OMIM:612650 OMIM:615505 OMIM:618801 OMIM:615444
 

Human Phenotype Ontology(HPO) is developed by the Human Phenotype Ontology Consortium. The version used here is December 15 2022 release.