Human Phenotype Ontology 
Grandparent Node:
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Abnormal heart morphology (HP:0001627)help
Parent Node:
expand
Abnormal cardiac atrium morphology (HP:0005120)help
Parent Node:
expand
Abnormal spatial orientation of the cardiac segments (HP:0011534)help
..Starting node
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Abnormal atrial arrangement (HP:0011535)help
Term ID: 11535
Name: Abnormal atrial arrangement
Synonym: Abnormal location of heart atrium
Definition: Abnormality of the spatial relationship of the atria to other components of the heart.
Comments:
Reference: HP:0011535
Genes and Diseases:
 
       Child Nodes:
........expandRight atrial isomerism (HP:0011536) help
........expandLeft atrial isomerism (HP:0011537) help
........expandAtrial situs inversus (HP:0011538) help
........expandAtrial situs ambiguous (HP:0011539) help

 Sister Nodes: 
..expandCongenitally corrected transposition of the great arteries (HP:0011540) help
..expandCriss-cross atrioventricular valves (HP:0011541) help
..expandL-looping of the right ventricle (HP:0011544) help
..expandSitus inversus totalis (HP:0001696) help
..expandSitus inversus with levocardia (HP:0031592) help
..expandSuperior-inferior ventricles without criss-cross atrioventricular valves (HP:0011543) help
InputHPO IDHPO termDistanceGeneGene id entrezHGNC IDDiseaseIdDiseaseNameFrequencyOnsetHGMD variantsClinVar variants
 
HPO disease - gene - phenotype typical associations:
 
HPO disease - gene - phenotype less frequent non-typical associations:
HP:0011535HP:0011535Abnormal atrial arrangement0CCDC103 CL E G H38838932700ORPHA:244Primary ciliary dyskinesiaHP:0040284 - Very rare36
HP:0011535HP:0011535Abnormal atrial arrangement0CCDC39 CL E G H33982925244ORPHA:244Primary ciliary dyskinesiaHP:0040284 - Very rare126
HP:0011535HP:0011535Abnormal atrial arrangement0CCDC40 CL E G H5503626090ORPHA:244Primary ciliary dyskinesiaHP:0040284 - Very rare182
HP:0011535HP:0011535Abnormal atrial arrangement0CCDC65 CL E G H8547829937ORPHA:244Primary ciliary dyskinesiaHP:0040284 - Very rare23
HP:0011535HP:0011535Abnormal atrial arrangement0CCNO CL E G H1030918576ORPHA:244Primary ciliary dyskinesiaHP:0040284 - Very rare23
HP:0011535HP:0011535Abnormal atrial arrangement0CFAP221 CL E G H20037333720ORPHA:244Primary ciliary dyskinesiaHP:0040284 - Very rare
HP:0011535HP:0011535Abnormal atrial arrangement0CFAP298 CL E G H566831301ORPHA:244Primary ciliary dyskinesiaHP:0040284 - Very rare
HP:0011535HP:0011535Abnormal atrial arrangement0CFAP300 CL E G H8501628188ORPHA:244Primary ciliary dyskinesiaHP:0040284 - Very rare
HP:0011535HP:0011535Abnormal atrial arrangement0CFC1 CL E G H5599718292OMIM:605376Heterotaxy, visceral, 2, autosomal13
HP:0011535HP:0011535Abnormal atrial arrangement0DNAAF1 CL E G H12387230539ORPHA:244Primary ciliary dyskinesiaHP:0040284 - Very rare116
HP:0011535HP:0011535Abnormal atrial arrangement0DNAAF11 CL E G H2363916725ORPHA:244Primary ciliary dyskinesiaHP:0040284 - Very rare
HP:0011535HP:0011535Abnormal atrial arrangement0DNAAF2 CL E G H5517220188ORPHA:244Primary ciliary dyskinesiaHP:0040284 - Very rare78
HP:0011535HP:0011535Abnormal atrial arrangement0DNAAF3 CL E G H35290930492ORPHA:244Primary ciliary dyskinesiaHP:0040284 - Very rare63
HP:0011535HP:0011535Abnormal atrial arrangement0DNAAF4 CL E G H16158221493ORPHA:244Primary ciliary dyskinesiaHP:0040284 - Very rare27
HP:0011535HP:0011535Abnormal atrial arrangement0DNAAF5 CL E G H5491926013ORPHA:244Primary ciliary dyskinesiaHP:0040284 - Very rare62
HP:0011535HP:0011535Abnormal atrial arrangement0DNAAF6 CL E G H13921228570ORPHA:244Primary ciliary dyskinesiaHP:0040284 - Very rare
HP:0011535HP:0011535Abnormal atrial arrangement0DNAH1 CL E G H259812940ORPHA:244Primary ciliary dyskinesiaHP:0040284 - Very rare21
HP:0011535HP:0011535Abnormal atrial arrangement0DNAH11 CL E G H87012942ORPHA:244Primary ciliary dyskinesiaHP:0040284 - Very rare542
HP:0011535HP:0011535Abnormal atrial arrangement0DNAH5 CL E G H17672950ORPHA:244Primary ciliary dyskinesiaHP:0040284 - Very rare527
HP:0011535HP:0011535Abnormal atrial arrangement0DNAH9 CL E G H17702953ORPHA:244Primary ciliary dyskinesiaHP:0040284 - Very rare18
HP:0011535HP:0011535Abnormal atrial arrangement0DNAI1 CL E G H270192954ORPHA:244Primary ciliary dyskinesiaHP:0040284 - Very rare73
HP:0011535HP:0011535Abnormal atrial arrangement0DNAI2 CL E G H6444618744ORPHA:244Primary ciliary dyskinesiaHP:0040284 - Very rare104
HP:0011535HP:0011535Abnormal atrial arrangement0DNAJB13 CL E G H37440730718ORPHA:244Primary ciliary dyskinesiaHP:0040284 - Very rare2
HP:0011535HP:0011535Abnormal atrial arrangement0DNAL1 CL E G H8354423247ORPHA:244Primary ciliary dyskinesiaHP:0040284 - Very rare167
HP:0011535HP:0011535Abnormal atrial arrangement0DRC1 CL E G H9274924245ORPHA:244Primary ciliary dyskinesiaHP:0040284 - Very rare44
HP:0011535HP:0011535Abnormal atrial arrangement0FOXJ1 CL E G H23023816ORPHA:244Primary ciliary dyskinesiaHP:0040284 - Very rare
HP:0011535HP:0011535Abnormal atrial arrangement0GAS2L2 CL E G H24617624846ORPHA:244Primary ciliary dyskinesiaHP:0040284 - Very rare1
HP:0011535HP:0011535Abnormal atrial arrangement0GAS8 CL E G H26224166ORPHA:244Primary ciliary dyskinesiaHP:0040284 - Very rare9
HP:0011535HP:0011535Abnormal atrial arrangement0GDF1 CL E G H26574214OMIM:208530Right atrial isomerism (Ivemark)28
HP:0011535HP:0011535Abnormal atrial arrangement0HYDIN CL E G H5476819368ORPHA:244Primary ciliary dyskinesiaHP:0040284 - Very rare21
HP:0011535HP:0011535Abnormal atrial arrangement0LRRC56 CL E G H11539925430ORPHA:244Primary ciliary dyskinesiaHP:0040284 - Very rare
HP:0011535HP:0011535Abnormal atrial arrangement0MCIDAS CL E G H34564340050ORPHA:244Primary ciliary dyskinesiaHP:0040284 - Very rare13
HP:0011535HP:0011535Abnormal atrial arrangement0NEK10 CL E G H15211018592ORPHA:244Primary ciliary dyskinesiaHP:0040284 - Very rare
HP:0011535HP:0011535Abnormal atrial arrangement0NME8 CL E G H5131416473ORPHA:244Primary ciliary dyskinesiaHP:0040284 - Very rare50
HP:0011535HP:0011535Abnormal atrial arrangement0NODAL CL E G H48387865OMIM:270100Heterotaxy, visceral, 545
HP:0011535HP:0011535Abnormal atrial arrangement0ODAD1 CL E G H9323326560ORPHA:244Primary ciliary dyskinesiaHP:0040284 - Very rare
HP:0011535HP:0011535Abnormal atrial arrangement0ODAD2 CL E G H5513025583ORPHA:244Primary ciliary dyskinesiaHP:0040284 - Very rare
HP:0011535HP:0011535Abnormal atrial arrangement0ODAD3 CL E G H11594828303ORPHA:244Primary ciliary dyskinesiaHP:0040284 - Very rare
HP:0011535HP:0011535Abnormal atrial arrangement0ODAD4 CL E G H8353825280ORPHA:244Primary ciliary dyskinesiaHP:0040284 - Very rare
HP:0011535HP:0011535Abnormal atrial arrangement0OFD1 CL E G H84812567ORPHA:244Primary ciliary dyskinesiaHP:0040284 - Very rare201
HP:0011535HP:0011535Abnormal atrial arrangement0PKD1L1 CL E G H16850718053OMIM:617205Heterotaxy, visceral, 8, autosomal3
HP:0011535HP:0011535Abnormal atrial arrangement0RPGR CL E G H610310295ORPHA:244Primary ciliary dyskinesiaHP:0040284 - Very rare200
HP:0011535HP:0011535Abnormal atrial arrangement0RSPH1 CL E G H8976512371ORPHA:244Primary ciliary dyskinesiaHP:0040284 - Very rare31
HP:0011535HP:0011535Abnormal atrial arrangement0RSPH3 CL E G H8386121054ORPHA:244Primary ciliary dyskinesiaHP:0040284 - Very rare5
HP:0011535HP:0011535Abnormal atrial arrangement0RSPH4A CL E G H34589521558ORPHA:244Primary ciliary dyskinesiaHP:0040284 - Very rare58
HP:0011535HP:0011535Abnormal atrial arrangement0RSPH9 CL E G H22142121057ORPHA:244Primary ciliary dyskinesiaHP:0040284 - Very rare20
HP:0011535HP:0011535Abnormal atrial arrangement0SPAG1 CL E G H667411212ORPHA:244Primary ciliary dyskinesiaHP:0040284 - Very rare45
HP:0011535HP:0011535Abnormal atrial arrangement0SPEF2 CL E G H7992526293ORPHA:244Primary ciliary dyskinesiaHP:0040284 - Very rare15
HP:0011535HP:0011535Abnormal atrial arrangement0STK36 CL E G H2714817209ORPHA:244Primary ciliary dyskinesiaHP:0040284 - Very rare3
HP:0011535HP:0011535Abnormal atrial arrangement0TTC12 CL E G H5497023700ORPHA:244Primary ciliary dyskinesiaHP:0040284 - Very rare
HP:0011535HP:0011535Abnormal atrial arrangement0ZIC3 CL E G H754712874OMIM:306955Heterotaxy, visceral, 1, X-linked39
HP:0011535HP:0011535Abnormal atrial arrangement0ZMYND10 CL E G H5136419412ORPHA:244Primary ciliary dyskinesiaHP:0040284 - Very rare20
HP:0011535HP:0011539Atrial situs ambiguous1CCDC103 CL E G H38838932700ORPHA:244Primary ciliary dyskinesiaHP:0040284 - Very rare36
HP:0011535HP:0011539Atrial situs ambiguous1CCDC39 CL E G H33982925244ORPHA:244Primary ciliary dyskinesiaHP:0040284 - Very rare126
HP:0011535HP:0011539Atrial situs ambiguous1CCDC40 CL E G H5503626090ORPHA:244Primary ciliary dyskinesiaHP:0040284 - Very rare182
HP:0011535HP:0011539Atrial situs ambiguous1CCDC65 CL E G H8547829937ORPHA:244Primary ciliary dyskinesiaHP:0040284 - Very rare23
HP:0011535HP:0011539Atrial situs ambiguous1CCNO CL E G H1030918576ORPHA:244Primary ciliary dyskinesiaHP:0040284 - Very rare23
HP:0011535HP:0011539Atrial situs ambiguous1CFAP221 CL E G H20037333720ORPHA:244Primary ciliary dyskinesiaHP:0040284 - Very rare
HP:0011535HP:0011539Atrial situs ambiguous1CFAP298 CL E G H566831301ORPHA:244Primary ciliary dyskinesiaHP:0040284 - Very rare
HP:0011535HP:0011539Atrial situs ambiguous1CFAP300 CL E G H8501628188ORPHA:244Primary ciliary dyskinesiaHP:0040284 - Very rare
HP:0011535HP:0011537Left atrial isomerism1CFC1 CL E G H5599718292OMIM:605376Heterotaxy, visceral, 2, autosomal.13
HP:0011535HP:0011539Atrial situs ambiguous1DNAAF1 CL E G H12387230539ORPHA:244Primary ciliary dyskinesiaHP:0040284 - Very rare116
HP:0011535HP:0011539Atrial situs ambiguous1DNAAF11 CL E G H2363916725ORPHA:244Primary ciliary dyskinesiaHP:0040284 - Very rare
HP:0011535HP:0011539Atrial situs ambiguous1DNAAF2 CL E G H5517220188ORPHA:244Primary ciliary dyskinesiaHP:0040284 - Very rare78
HP:0011535HP:0011539Atrial situs ambiguous1DNAAF3 CL E G H35290930492ORPHA:244Primary ciliary dyskinesiaHP:0040284 - Very rare63
HP:0011535HP:0011539Atrial situs ambiguous1DNAAF4 CL E G H16158221493ORPHA:244Primary ciliary dyskinesiaHP:0040284 - Very rare27
HP:0011535HP:0011539Atrial situs ambiguous1DNAAF5 CL E G H5491926013ORPHA:244Primary ciliary dyskinesiaHP:0040284 - Very rare62
HP:0011535HP:0011539Atrial situs ambiguous1DNAAF6 CL E G H13921228570ORPHA:244Primary ciliary dyskinesiaHP:0040284 - Very rare
HP:0011535HP:0011539Atrial situs ambiguous1DNAH1 CL E G H259812940ORPHA:244Primary ciliary dyskinesiaHP:0040284 - Very rare21
HP:0011535HP:0011539Atrial situs ambiguous1DNAH11 CL E G H87012942ORPHA:244Primary ciliary dyskinesiaHP:0040284 - Very rare542
HP:0011535HP:0011539Atrial situs ambiguous1DNAH5 CL E G H17672950ORPHA:244Primary ciliary dyskinesiaHP:0040284 - Very rare527
HP:0011535HP:0011539Atrial situs ambiguous1DNAH9 CL E G H17702953ORPHA:244Primary ciliary dyskinesiaHP:0040284 - Very rare18
HP:0011535HP:0011539Atrial situs ambiguous1DNAI1 CL E G H270192954ORPHA:244Primary ciliary dyskinesiaHP:0040284 - Very rare73
HP:0011535HP:0011539Atrial situs ambiguous1DNAI2 CL E G H6444618744ORPHA:244Primary ciliary dyskinesiaHP:0040284 - Very rare104
HP:0011535HP:0011539Atrial situs ambiguous1DNAJB13 CL E G H37440730718ORPHA:244Primary ciliary dyskinesiaHP:0040284 - Very rare2
HP:0011535HP:0011539Atrial situs ambiguous1DNAL1 CL E G H8354423247ORPHA:244Primary ciliary dyskinesiaHP:0040284 - Very rare167
HP:0011535HP:0011539Atrial situs ambiguous1DRC1 CL E G H9274924245ORPHA:244Primary ciliary dyskinesiaHP:0040284 - Very rare44
HP:0011535HP:0011539Atrial situs ambiguous1FOXJ1 CL E G H23023816ORPHA:244Primary ciliary dyskinesiaHP:0040284 - Very rare
HP:0011535HP:0011539Atrial situs ambiguous1GAS2L2 CL E G H24617624846ORPHA:244Primary ciliary dyskinesiaHP:0040284 - Very rare1
HP:0011535HP:0011539Atrial situs ambiguous1GAS8 CL E G H26224166ORPHA:244Primary ciliary dyskinesiaHP:0040284 - Very rare9
HP:0011535HP:0011536Right atrial isomerism1GDF1 CL E G H26574214OMIM:208530Right atrial isomerism (Ivemark)28
HP:0011535HP:0011539Atrial situs ambiguous1HYDIN CL E G H5476819368ORPHA:244Primary ciliary dyskinesiaHP:0040284 - Very rare21
HP:0011535HP:0011539Atrial situs ambiguous1LRRC56 CL E G H11539925430ORPHA:244Primary ciliary dyskinesiaHP:0040284 - Very rare
HP:0011535HP:0011539Atrial situs ambiguous1MCIDAS CL E G H34564340050ORPHA:244Primary ciliary dyskinesiaHP:0040284 - Very rare13
HP:0011535HP:0011539Atrial situs ambiguous1NEK10 CL E G H15211018592ORPHA:244Primary ciliary dyskinesiaHP:0040284 - Very rare
HP:0011535HP:0011539Atrial situs ambiguous1NME8 CL E G H5131416473ORPHA:244Primary ciliary dyskinesiaHP:0040284 - Very rare50
HP:0011535HP:0011536Right atrial isomerism1NODAL CL E G H48387865OMIM:270100Heterotaxy, visceral, 545
HP:0011535HP:0011539Atrial situs ambiguous1ODAD1 CL E G H9323326560ORPHA:244Primary ciliary dyskinesiaHP:0040284 - Very rare
HP:0011535HP:0011539Atrial situs ambiguous1ODAD2 CL E G H5513025583ORPHA:244Primary ciliary dyskinesiaHP:0040284 - Very rare
HP:0011535HP:0011539Atrial situs ambiguous1ODAD3 CL E G H11594828303ORPHA:244Primary ciliary dyskinesiaHP:0040284 - Very rare
HP:0011535HP:0011539Atrial situs ambiguous1ODAD4 CL E G H8353825280ORPHA:244Primary ciliary dyskinesiaHP:0040284 - Very rare
HP:0011535HP:0011539Atrial situs ambiguous1OFD1 CL E G H84812567ORPHA:244Primary ciliary dyskinesiaHP:0040284 - Very rare201
HP:0011535HP:0011539Atrial situs ambiguous1PKD1L1 CL E G H16850718053OMIM:617205Heterotaxy, visceral, 8, autosomal.3
HP:0011535HP:0011538Atrial situs inversus1PKD1L1 CL E G H16850718053OMIM:617205Heterotaxy, visceral, 8, autosomal3
HP:0011535HP:0011539Atrial situs ambiguous1RPGR CL E G H610310295ORPHA:244Primary ciliary dyskinesiaHP:0040284 - Very rare200
HP:0011535HP:0011539Atrial situs ambiguous1RSPH1 CL E G H8976512371ORPHA:244Primary ciliary dyskinesiaHP:0040284 - Very rare31
HP:0011535HP:0011539Atrial situs ambiguous1RSPH3 CL E G H8386121054ORPHA:244Primary ciliary dyskinesiaHP:0040284 - Very rare5
HP:0011535HP:0011539Atrial situs ambiguous1RSPH4A CL E G H34589521558ORPHA:244Primary ciliary dyskinesiaHP:0040284 - Very rare58
HP:0011535HP:0011539Atrial situs ambiguous1RSPH9 CL E G H22142121057ORPHA:244Primary ciliary dyskinesiaHP:0040284 - Very rare20
HP:0011535HP:0011539Atrial situs ambiguous1SPAG1 CL E G H667411212ORPHA:244Primary ciliary dyskinesiaHP:0040284 - Very rare45
HP:0011535HP:0011539Atrial situs ambiguous1SPEF2 CL E G H7992526293ORPHA:244Primary ciliary dyskinesiaHP:0040284 - Very rare15
HP:0011535HP:0011539Atrial situs ambiguous1STK36 CL E G H2714817209ORPHA:244Primary ciliary dyskinesiaHP:0040284 - Very rare3
HP:0011535HP:0011539Atrial situs ambiguous1TTC12 CL E G H5497023700ORPHA:244Primary ciliary dyskinesiaHP:0040284 - Very rare
HP:0011535HP:0011536Right atrial isomerism1ZIC3 CL E G H754712874OMIM:306955Heterotaxy, visceral, 1, X-linked39
HP:0011535HP:0011539Atrial situs ambiguous1ZMYND10 CL E G H5136419412ORPHA:244Primary ciliary dyskinesiaHP:0040284 - Very rare20


Genes (52) :CCDC103 CCDC39 CCDC40 CCDC65 CCNO CFAP221 CFAP298 CFAP300 CFC1 DNAAF1 DNAAF11 DNAAF2 DNAAF3 DNAAF4 DNAAF5 DNAAF6 DNAH1 DNAH11 DNAH5 DNAH9 DNAI1 DNAI2 DNAJB13 DNAL1 DRC1 FOXJ1 GAS2L2 GAS8 GDF1 HYDIN LRRC56 MCIDAS NEK10 NME8 NODAL ODAD1 ODAD2 ODAD3 ODAD4 OFD1 PKD1L1 RPGR RSPH1 RSPH3 RSPH4A RSPH9 SPAG1 SPEF2 STK36 TTC12 ZIC3 ZMYND10

Diseases (6) :ORPHA:244 OMIM:605376 OMIM:208530 OMIM:270100 OMIM:617205 OMIM:306955
 

Human Phenotype Ontology(HPO) is developed by the Human Phenotype Ontology Consortium. The version used here is December 15 2022 release.