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Our Team
MSeqDR Consortium Organization
WORKING GROUP 1: TECHNOLOGY AND BIOINFORMATICS
- WG1 Co-Chairs: Marni Falk, MD (CHOP/Upenn), Xiaowu Gai, PhD (chla), Curt Scharfe, MD, PhD (Stanford)
- WG1 Advisors: Lisa Brooks, PhD (NHGRI), Deanna Church, PhD (NCBI, NIH)
WORKING GROUP 2: PHENOTYPING, DATABASING, IRB CONCERNS, AND ACCESS
- WG2 Co-Chairs: Patrick Chinnery, MD, PhD (Newcastle), Lee-Jun Wong, PhD (Baylor), and Peter White, PhD (CHOP/Penn)
- WG2 Advisors: Donna Maglott, PhD (NCBI, NIH) and Yaffa Rubinstein, PhD (NCATS, ORDR)
WORKING GROUP 3: MITOCHONDRIAL DNA SPECIFIC CONCERNS
- WG3 Co-Chairs: Vincent Procaccio, PhD (Angers) and Douglas Wallace, PhD (CHOP/Upenn)
- WG3 Advisor: Richard Cotton, PhD (Melbourne/Human Variome Project)
Bioinformatician
Dr. Lishuang Shen: Database and website development and administration.
MSeqDR Prototype Development
- Leaders: Marni Falk, MD (CHOP), Xiaowu Gai, PhD (CHLA), Stephan Zuchner, MD (Miami)
- International participation of Mito Disease clinicians and researchers generating and analyzing whole exome data: Holger Prokisch (Germany), Marcella Attimonelli (Italy), Mark Tarnopolsky Canada), Eric Shoubridge Canada), Grant Mitchell , Isabella Thiffault (Canada), David Thorburn (Australia), Anu Sumolainen-Wartiovaara (Finland), Patrick Chinnery (Newcastle, UK), Yasushi Okazaki (Japan).
- Dedicated MSeqDR bioinformatician, funded jointly by UMDF and NAMDC, will establish MSeqDR website and tools, data file handling, comparative analyses of bioinformatics pipelines, extract/link phenotypic data from NAMDC patient registry, perform common reannotation of all exome data to deposit and mine in user friendly web interface.
Recent Posts
- Preclinical Study Shows Combination of Vitamins, Supplements May Benefit Mitochondrial Disease
- gnoMAD shares mtDNA variant data from 56,434 whole genome samples
- mvTool v.6: The mtDNA variant reference based on 316,530 whole genome sequences
- MSeqDR is migrated to a new webserver at CHLA
- International Research Team Develops Consensus Variant Classification Guidelines for Genomic Variants in Mitochondrial DNA
- mvTool v.5: New report layout and new mtDNA variant data from 200,000 healthy people
- Recent publications from MSeqDR supported by the UMDF and NIH grants
- ClinGen / ClinVar – MSeqDR Working Groups & Expert Panels
- ClinGen approved the MSeqDR Consortium mitochondrial DNA Sequence Variant Interpretation (SVI) specifications
- U24 Mitochondrial Diseases Expert Panel is establishing 63 genes’ Leigh Disease associations at ClinGen