MSeqDR Central Portal

MSeqDR Data Summary for the Term MT-TR:
Ensembl Gene IDAssociated Gene NameLSDB GenesLSDB VariantsclinVar hitsEnsembl Gene IDEnsembl Transcript IDEnsembl Protein IDDescriptionChrGene StartGene EndStrandBandTranscript Start bpTranscript End bpAssociated Gene NameAssociated Transcript NameAssociated Gene DBAssociated Transcript DBTranscript countpct GC contentGene BiotypeTranscript BiotypeSource GeneSource TranscriptStatus geneStatus transcript EntrezGene IDHGNC IDHGNC SymbolRefSeq mRNASeq region id
ENSG00000210174 MSeqDR Search EnsemblMT-TR1152ENSG00000210174ENST00000387439mitochondrially encoded tRNA arginine [Source:HGNC Symbol;Acc:7496]M104051046911040510469MT-TRMT-TR-201HGNC SymbolHGNC transcript name123.08Mt_tRNAMt_tRNAinsdcinsdcKNOWNKNOWN45737496MT-TR100965601

MSeqDR Master Exome Data Set M1: 7 entries from same gene

No.ChrPositionReferenceVariantEnsemblTranscriptIDEnsemblGeneIDGene_StartGene_EndEnsemblProteinIDGenestrandUniprotcChangepChangeNaturedbSNPFreqEVSphastConsSIFTPolyphenHGMDtypesamples
1M10410TCENST00000387439ENSG000002101741040510469-MT-TR1-c.6T>C--rs75673999------hom1
2M10427GAENST00000387439ENSG000002101741040510469-MT-TR1-c.23G>A--NA--lod=139:497---hom2
3M10446AGENST00000387439ENSG000002101741040510469-MT-TR1-c.42A>G--NA--lod=139:497---hom1
4M10454TCENST00000387439ENSG000002101741040510469-MT-TR1-c.50T>C--NA------hom3
5M10456ATENST00000387439ENSG000002101741040510469-MT-TR1-c.52A>T--NA------hom1
6M10463TCENST00000387439ENSG000002101741040510469-MT-TR1-c.59T>C--rs113485988--lod=47:381---het1
7M10463TCENST00000387439ENSG000002101741040510469-MT-TR1-c.59T>C--rs113485988--lod=47:381---hom40
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       Transcripts and variants in the surrounding MT-TR M:10405..10469 region Gbrowse