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Examples Gene: MT-ND1, POLG, Region: M:1-1000 Variant: m.8993T>G, 1:g.10042757T>C rs3888511 MSCV_0000006, ClinVar: RCV000000015, Disease: Leigh syndrome, Phenotype: Retinopathy

MSeqDR Central Portal

MSeqDR Data Summary for the Term FECH:

Ensembl Gene ID	Associated Gene Name	LSDB Genes	LSDB Variants	clinVar hits	Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID	Description	Chr	Gene Start	Gene End	Strand	Band	Transcript Start bp	Transcript End bp	Associated Gene Name	Associated Transcript Name	Associated Gene DB	Associated Transcript DB	Transcript count	pct GC content	Gene Biotype	Transcript Biotype	Source Gene	Source Transcript	Status gene	Status transcript	EntrezGene ID	HGNC ID	HGNC Symbol	RefSeq mRNA	Seq region id
ENSG00000066926	FECH	1	0	17	ENSG00000066926	ENST00000262093	ENSP00000262093	ferrochelatase [Source:HGNC Symbol;Acc:3647]	18	55215515	55254004	-1	q21.31	55215515	55254004	FECH	FECH-001	HGNC Symbol	HGNC transcript name	10	42.66	protein_coding	protein_coding	ensembl_hava	ensembl_hava	KNOWN	KNOWN	2235	3647	FECH	NM_000140	27512

MSeqDR Master Exome Data Set M1: 245 entries from same gene

No.	Chr	Position	Reference	Variant	EnsemblTranscriptID	EnsemblGeneID	Gene_Start	Gene_End	EnsemblProteinID	Gene	strand	Uniprot	cChange	pChange	Nature	dbSNP	Freq	EVS	phastCons	SIFT	Polyphen	HGMD	type	samples
1	18	55215519	T	C	ENST00000262093	ENSG00000066926	55215515	55254004	ENSP00000262093	FECH	-1	HEMH_HUMAN	-	-	3'_UTR	NA	-	-	-	-	-	-	het	4
2	18	55215573	A	C	ENST00000262093	ENSG00000066926	55215515	55254004	ENSP00000262093	FECH	-1	HEMH_HUMAN	-	-	3'_UTR	rs1062010	0.14112	-	-	-	-	-	het	146
3	18	55215573	A	C	ENST00000262093	ENSG00000066926	55215515	55254004	ENSP00000262093	FECH	-1	HEMH_HUMAN	-	-	3'_UTR	rs1062010	0.14112	-	-	-	-	-	hom	14
4	18	55215813	G	A	ENST00000262093	ENSG00000066926	55215515	55254004	ENSP00000262093	FECH	-1	HEMH_HUMAN	-	-	3'_UTR	rs73453639	0.0323	-	-	-	-	-	het	1
5	18	55215884	G	A	ENST00000262093	ENSG00000066926	55215515	55254004	ENSP00000262093	FECH	-1	HEMH_HUMAN	-	-	3'_UTR	NA	-	-	-	-	-	-	het	1
6	18	55215994	T	C	ENST00000262093	ENSG00000066926	55215515	55254004	ENSP00000262093	FECH	-1	HEMH_HUMAN	-	-	3'_UTR	NA	-	-	-	-	-	-	het	2
7	18	55216038	A	G	ENST00000262093	ENSG00000066926	55215515	55254004	ENSP00000262093	FECH	-1	HEMH_HUMAN	-	-	3'_UTR	rs145263222	0.0028	-	-	-	-	-	het	1
8	18	55216194	G	A	ENST00000262093	ENSG00000066926	55215515	55254004	ENSP00000262093	FECH	-1	HEMH_HUMAN	-	-	3'_UTR	rs115377178	0.0154	-	-	-	-	-	het	1
9	18	55216322	A	G	ENST00000262093	ENSG00000066926	55215515	55254004	ENSP00000262093	FECH	-1	HEMH_HUMAN	-	-	3'_UTR	rs78359676	0.0503	-	-	-	-	-	het	21
10	18	55216352	T	A	ENST00000262093	ENSG00000066926	55215515	55254004	ENSP00000262093	FECH	-1	HEMH_HUMAN	-	-	3'_UTR	NA	-	-	-	-	-	-	het	1
11	18	55216377	T	C	ENST00000262093	ENSG00000066926	55215515	55254004	ENSP00000262093	FECH	-1	HEMH_HUMAN	-	-	3'_UTR	NA	-	-	-	-	-	-	het	1
12	18	55216436	C	T	ENST00000262093	ENSG00000066926	55215515	55254004	ENSP00000262093	FECH	-1	HEMH_HUMAN	-	-	3'_UTR	NA	-	-	-	-	-	-	het	2
13	18	55216547	G	C	ENST00000262093	ENSG00000066926	55215515	55254004	ENSP00000262093	FECH	-1	HEMH_HUMAN	-	-	3'_UTR	NA	-	-	-	-	-	-	het	1
14	18	55216655	C	+T	ENST00000262093	ENSG00000066926	55215515	55254004	ENSP00000262093	FECH	-1	HEMH_HUMAN	-	-	3'_UTR	NA	-	-	-	-	-	-	het	11
15	18	55216655	C	+T	ENST00000262093	ENSG00000066926	55215515	55254004	ENSP00000262093	FECH	-1	HEMH_HUMAN	-	-	3'_UTR	NA	-	-	-	-	-	-	hom	2
16	18	55216656	T	+A	ENST00000262093	ENSG00000066926	55215515	55254004	ENSP00000262093	FECH	-1	HEMH_HUMAN	-	-	3'_UTR	rs1126640	-	-	-	-	-	-	het	18
17	18	55216656	T	+TAAA	ENST00000262093	ENSG00000066926	55215515	55254004	ENSP00000262093	FECH	-1	HEMH_HUMAN	-	-	3'_UTR	NA	-	-	-	-	-	-	het	3
18	18	55216656	T	+TAA	ENST00000262093	ENSG00000066926	55215515	55254004	ENSP00000262093	FECH	-1	HEMH_HUMAN	-	-	3'_UTR	rs59569925	-	-	-	-	-	-	het	74
19	18	55216656	T	+TA	ENST00000262093	ENSG00000066926	55215515	55254004	ENSP00000262093	FECH	-1	HEMH_HUMAN	-	-	3'_UTR	rs59569925	-	-	-	-	-	-	het	73
20	18	55216767	T	+TTA	ENST00000262093	ENSG00000066926	55215515	55254004	ENSP00000262093	FECH	-1	HEMH_HUMAN	-	-	3'_UTR	rs201540657	-	-	lod=36:352	-	-	-	het	1

** A friendly reminder: guest user can access up to first 20 entries per gene from MSeqDR Master Exome Data Set M1. To gain access to the full power of MSeqDR, please login, or register, then request access to data.

As MSeqDR registered user , your accessible protected data set after login:

Select a dataset from the above drop-down list,
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Transcripts and variants in the surrounding FECH 18:55215515..55254004 region Gbrowse