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Examples Gene: MT-ND1, POLG, Region: M:1-1000 Variant: m.8993T>G, 1:g.10042757T>C rs3888511 MSCV_0000006, ClinVar: RCV000000015, Disease: Leigh syndrome, Phenotype: Retinopathy

MSeqDR Central Portal

MSeqDR Data Summary for the Term ENSG00000155906:

Ensembl Gene ID	Associated Gene Name	LSDB Genes	LSDB Variants	clinVar hits	Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID	Description	Chr	Gene Start	Gene End	Strand	Band	Transcript Start bp	Transcript End bp	Associated Gene Name	Associated Transcript Name	Associated Gene DB	Associated Transcript DB	Transcript count	pct GC content	Gene Biotype	Transcript Biotype	Source Gene	Source Transcript	Status gene	Status transcript	EntrezGene ID	HGNC ID	HGNC Symbol	RefSeq mRNA	Seq region id
ENSG00000155906	RMND1	1	52	12	ENSG00000155906	ENST00000336451	ENSP00000336683	required for meiotic nuclear division 1 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:21176]	6	151725989	151773259	-1	q25.1	151725989	151765760	RMND1	RMND1-005	HGNC Symbol	HGNC transcript name	4	42.29	protein_coding	protein_coding	ensembl_hava	havana	KNOWN	KNOWN	55005	21176	RMND1		27515

MSeqDR Master Exome Data Set M1: 82 entries from same gene

No.	Chr	Position	Reference	Variant	EnsemblTranscriptID	EnsemblGeneID	Gene_Start	Gene_End	EnsemblProteinID	Gene	strand	Uniprot	cChange	pChange	Nature	dbSNP	Freq	EVS	phastCons	SIFT	Polyphen	HGMD	type	samples
1	6	151725993	C	+ATTT	ENST00000336451	ENSG00000155906	151725989	151773259	ENSP00000336683	RMND1	-1	RMND1_HUMAN	-	-	3'_UTR	rs145426014	-	-	-	-	-	-	het	68
2	6	151725993	C	+ATTT	ENST00000336451	ENSG00000155906	151725989	151773259	ENSP00000336683	RMND1	-1	RMND1_HUMAN	-	-	3'_UTR	rs145426014	-	-	-	-	-	-	hom	5
3	6	151725993	C	+ATTT	ENST00000367303	ENSG00000155906	151725989	151773259	ENSP00000356272	RMND1	-1	RMND1_HUMAN	-	-	3'_UTR	rs145426014	-	-	-	-	-	-	het	68
4	6	151725993	C	+ATTT	ENST00000367303	ENSG00000155906	151725989	151773259	ENSP00000356272	RMND1	-1	RMND1_HUMAN	-	-	3'_UTR	rs145426014	-	-	-	-	-	-	hom	5
5	6	151726086	C	T	ENST00000336451	ENSG00000155906	151725989	151773259	ENSP00000336683	RMND1	-1	RMND1_HUMAN	-	-	3'_UTR	NA	-	-	-	-	-	-	het	1
6	6	151726086	C	T	ENST00000367303	ENSG00000155906	151725989	151773259	ENSP00000356272	RMND1	-1	RMND1_HUMAN	-	-	3'_UTR	NA	-	-	-	-	-	-	het	1
7	6	151726175	G	T	ENST00000336451	ENSG00000155906	151725989	151773259	ENSP00000336683	RMND1	-1	RMND1_HUMAN	-	-	3'_UTR	rs3757312	0.4792	-	-	-	-	-	het	23
8	6	151726175	G	T	ENST00000336451	ENSG00000155906	151725989	151773259	ENSP00000336683	RMND1	-1	RMND1_HUMAN	-	-	3'_UTR	rs3757312	0.4792	-	-	-	-	-	hom	67
9	6	151726175	G	T	ENST00000367303	ENSG00000155906	151725989	151773259	ENSP00000356272	RMND1	-1	RMND1_HUMAN	-	-	3'_UTR	rs3757312	0.4792	-	-	-	-	-	het	23
10	6	151726175	G	T	ENST00000367303	ENSG00000155906	151725989	151773259	ENSP00000356272	RMND1	-1	RMND1_HUMAN	-	-	3'_UTR	rs3757312	0.4792	-	-	-	-	-	hom	67
11	6	151726176	G	C	ENST00000336451	ENSG00000155906	151725989	151773259	ENSP00000336683	RMND1	-1	RMND1_HUMAN	-	-	3'_UTR	NA	-	-	-	-	-	-	het	2
12	6	151726176	G	C	ENST00000367303	ENSG00000155906	151725989	151773259	ENSP00000356272	RMND1	-1	RMND1_HUMAN	-	-	3'_UTR	NA	-	-	-	-	-	-	het	2
13	6	151726209	G	A	ENST00000336451	ENSG00000155906	151725989	151773259	ENSP00000336683	RMND1	-1	RMND1_HUMAN	-	-	3'_UTR	NA	-	-	-	-	-	-	het	1
14	6	151726209	G	A	ENST00000367303	ENSG00000155906	151725989	151773259	ENSP00000356272	RMND1	-1	RMND1_HUMAN	-	-	3'_UTR	NA	-	-	-	-	-	-	het	1
15	6	151726300	G	C	ENST00000336451	ENSG00000155906	151725989	151773259	ENSP00000336683	RMND1	-1	RMND1_HUMAN	-	-	3'_UTR	rs1065310	0.5126	C=728/G=2454;C=823/G=561;C=1551/G=3015	-	-	-	-	het	191
16	6	151726300	G	C	ENST00000336451	ENSG00000155906	151725989	151773259	ENSP00000336683	RMND1	-1	RMND1_HUMAN	-	-	3'_UTR	rs1065310	0.5126	C=728/G=2454;C=823/G=561;C=1551/G=3015	-	-	-	-	hom	90
17	6	151726300	G	C	ENST00000367303	ENSG00000155906	151725989	151773259	ENSP00000356272	RMND1	-1	RMND1_HUMAN	-	-	3'_UTR	rs1065310	0.5126	C=728/G=2454;C=823/G=561;C=1551/G=3015	-	-	-	-	het	191
18	6	151726300	G	C	ENST00000367303	ENSG00000155906	151725989	151773259	ENSP00000356272	RMND1	-1	RMND1_HUMAN	-	-	3'_UTR	rs1065310	0.5126	C=728/G=2454;C=823/G=561;C=1551/G=3015	-	-	-	-	hom	90
19	6	151726315	T	G	ENST00000336451	ENSG00000155906	151725989	151773259	ENSP00000336683	RMND1	-1	RMND1_HUMAN	-	-	3'_UTR	rs138731343	0.0028	G=0/T=3182;G=9/T=1375;G=9/T=4557	lod=22:300	-	-	-	het	3
20	6	151726315	T	G	ENST00000367303	ENSG00000155906	151725989	151773259	ENSP00000356272	RMND1	-1	RMND1_HUMAN	-	-	3'_UTR	rs138731343	0.0028	G=0/T=3182;G=9/T=1375;G=9/T=4557	lod=22:300	-	-	-	het	3

** A friendly reminder: guest user can access up to first 20 entries per gene from MSeqDR Master Exome Data Set M1. To gain access to the full power of MSeqDR, please login, or register, then request access to data.

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Select a dataset from the above drop-down list,
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Transcripts and variants in the surrounding RMND1 6:151725989..151773259 region Gbrowse