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Examples Gene: MT-ND1, POLG, Region: M:1-1000 Variant: m.8993T>G, 1:g.10042757T>C rs3888511 MSCV_0000006, ClinVar: RCV000000015, Disease: Leigh syndrome, Phenotype: Retinopathy

MSeqDR Central Portal

MSeqDR Data Summary for the Term DNAJC19:

Ensembl Gene ID	Associated Gene Name	LSDB Genes	LSDB Variants	clinVar hits	Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID	Description	Chr	Gene Start	Gene End	Strand	Band	Transcript Start bp	Transcript End bp	Associated Gene Name	Associated Transcript Name	Associated Gene DB	Associated Transcript DB	Transcript count	pct GC content	Gene Biotype	Transcript Biotype	Source Gene	Source Transcript	Status gene	Status transcript	EntrezGene ID	HGNC ID	HGNC Symbol	RefSeq mRNA	Seq region id
ENSG00000205981	DNAJC19	1	33	9	ENSG00000205981	ENST00000382564	ENSP00000372005	DnaJ (Hsp40) homolog, subfamily C, member 19 [Source:HGNC Symbol;Acc:30528]	3	180701497	180707562	-1	q26.33	180701497	180707561	DNAJC19	DNAJC19-001	HGNC Symbol	HGNC transcript name	9	39.17	protein_coding	protein_coding	ensembl_hava	ensembl_hava	KNOWN	KNOWN	131118	30528	DNAJC19	NM_145261	27517

MSeqDR Master Exome Data Set M1: 93 entries from same gene

No.	Chr	Position	Reference	Variant	EnsemblTranscriptID	EnsemblGeneID	Gene_Start	Gene_End	EnsemblProteinID	Gene	strand	Uniprot	cChange	pChange	Nature	dbSNP	Freq	EVS	phastCons	SIFT	Polyphen	HGMD	type	samples
1	3	180701560	G	-TTGATA	ENST00000382564	ENSG00000205981	180701497	180707562	ENSP00000372005	DNAJC19	-1	TIM14_HUMAN	-	-	3'_UTR	NA	-	-	-	-	-	-	het	1
2	3	180701783	T	G	ENST00000382564	ENSG00000205981	180701497	180707562	ENSP00000372005	DNAJC19	-1	TIM14_HUMAN	-	-	3'_UTR	rs146964003	0.0042	-	-	-	-	-	het	1
3	3	180701783	T	G	ENST00000469657	ENSG00000205981	180701497	180707562	ENSP00000418058	DNAJC19	-1	-	-	-	3'_UTR	rs146964003	0.0042	-	-	-	-	-	het	1
4	3	180701884	T	+AC	ENST00000382564	ENSG00000205981	180701497	180707562	ENSP00000372005	DNAJC19	-1	TIM14_HUMAN	-	-	3'_UTR	NA	-	-	-	-	-	-	het	1
5	3	180701884	T	+AC	ENST00000469657	ENSG00000205981	180701497	180707562	ENSP00000418058	DNAJC19	-1	-	-	-	3'_UTR	NA	-	-	-	-	-	-	het	1
6	3	180701940	C	G	ENST00000382564	ENSG00000205981	180701497	180707562	ENSP00000372005	DNAJC19	-1	TIM14_HUMAN	-	-	3'_UTR	NA	-	-	-	-	-	-	het	1
7	3	180701940	C	G	ENST00000469657	ENSG00000205981	180701497	180707562	ENSP00000418058	DNAJC19	-1	-	-	-	3'_UTR	NA	-	-	-	-	-	-	het	1
8	3	180701987	C	T	ENST00000382564	ENSG00000205981	180701497	180707562	ENSP00000372005	DNAJC19	-1	TIM14_HUMAN	-	-	3'_UTR	rs1805635	0.0174	-	-	-	-	-	het	2
9	3	180701987	C	T	ENST00000469657	ENSG00000205981	180701497	180707562	ENSP00000418058	DNAJC19	-1	-	-	-	3'_UTR	rs1805635	0.0174	-	-	-	-	-	het	2
10	3	180702215	G	-GT	ENST00000382564	ENSG00000205981	180701497	180707562	ENSP00000372005	DNAJC19	-1	TIM14_HUMAN	-	-	3'_UTR	NA	-	-	-	-	-	-	het	1
11	3	180702215	G	-GT	ENST00000469657	ENSG00000205981	180701497	180707562	ENSP00000418058	DNAJC19	-1	-	-	-	3'_UTR	NA	-	-	-	-	-	-	het	1
12	3	180702215	G	-GT	ENST00000486355	ENSG00000205981	180701497	180707562	ENSP00000419991	DNAJC19	-1	-	-	-	3'_UTR	NA	-	-	-	-	-	-	het	1
13	3	180702215	G	-GT	ENST00000491873	ENSG00000205981	180701497	180707562	ENSP00000420767	DNAJC19	-1	-	-	-	3'_UTR	NA	-	-	-	-	-	-	het	1
14	3	180702240	C	T	ENST00000382564	ENSG00000205981	180701497	180707562	ENSP00000372005	DNAJC19	-1	TIM14_HUMAN	-	-	3'_UTR	rs1051411	0.19943	-	-	-	-	-	hom	32
15	3	180702240	C	T	ENST00000382564	ENSG00000205981	180701497	180707562	ENSP00000372005	DNAJC19	-1	TIM14_HUMAN	-	-	3'_UTR	rs1051411	0.19943	-	-	-	-	-	het	272
16	3	180702240	C	T	ENST00000469657	ENSG00000205981	180701497	180707562	ENSP00000418058	DNAJC19	-1	-	-	-	3'_UTR	rs1051411	0.19943	-	-	-	-	-	hom	32
17	3	180702240	C	T	ENST00000469657	ENSG00000205981	180701497	180707562	ENSP00000418058	DNAJC19	-1	-	-	-	3'_UTR	rs1051411	0.19943	-	-	-	-	-	het	272
18	3	180702240	C	T	ENST00000486355	ENSG00000205981	180701497	180707562	ENSP00000419991	DNAJC19	-1	-	-	-	3'_UTR	rs1051411	0.19943	-	-	-	-	-	hom	32
19	3	180702240	C	T	ENST00000486355	ENSG00000205981	180701497	180707562	ENSP00000419991	DNAJC19	-1	-	-	-	3'_UTR	rs1051411	0.19943	-	-	-	-	-	het	272
20	3	180702240	C	T	ENST00000491873	ENSG00000205981	180701497	180707562	ENSP00000420767	DNAJC19	-1	-	-	-	3'_UTR	rs1051411	0.19943	-	-	-	-	-	hom	32

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Select a dataset from the above drop-down list,
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Transcripts and variants in the surrounding DNAJC19 3:180701497..180707562 region Gbrowse