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Examples Gene: MT-ND1, POLG, Region: M:1-1000 Variant: m.8993T>G, 1:g.10042757T>C rs3888511 MSCV_0000006, ClinVar: RCV000000015, Disease: Leigh syndrome, Phenotype: Retinopathy

MSeqDR Central Portal

MSeqDR Data Summary for the Term ACSL4:

Ensembl Gene ID	Associated Gene Name	LSDB Genes	LSDB Variants	clinVar hits	Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID	Description	Chr	Gene Start	Gene End	Strand	Band	Transcript Start bp	Transcript End bp	Associated Gene Name	Associated Transcript Name	Associated Gene DB	Associated Transcript DB	Transcript count	pct GC content	Gene Biotype	Transcript Biotype	Source Gene	Source Transcript	Status gene	Status transcript	EntrezGene ID	HGNC ID	HGNC Symbol	RefSeq mRNA	Seq region id
ENSG00000068366	ACSL4	1	0	11	ENSG00000068366	ENST00000439581		acyl-CoA synthetase long-chain family member 4 [Source:HGNC Symbol;Acc:3571]	X	108867473	108976632	-1	q23	108867473	108877915	ACSL4	ACSL4-012	HGNC Symbol	HGNC transcript name	12	39.16	protein_coding	processed_transcript	ensembl_hava	havana	KNOWN	KNOWN	2182	3571	ACSL4		27516

MSeqDR Master Exome Data Set M1: 110 entries from same gene

No.	Chr	Position	Reference	Variant	EnsemblTranscriptID	EnsemblGeneID	Gene_Start	Gene_End	EnsemblProteinID	Gene	strand	Uniprot	cChange	pChange	Nature	dbSNP	Freq	EVS	phastCons	SIFT	Polyphen	HGMD	type	samples
1	X	108885711	A	G	ENST00000340800	ENSG00000068366	108867473	108976632	ENSP00000339787	ACSL4	-1	ACSL4_HUMAN	-	-	3'_UTR	NA	-	-	lod=218:545	-	-	-	het	1
2	X	108885711	A	G	ENST00000348502	ENSG00000068366	108867473	108976632	ENSP00000262835	ACSL4	-1	ACSL4_HUMAN	-	-	3'_UTR	NA	-	-	lod=218:545	-	-	-	het	1
3	X	108885711	A	G	ENST00000469796	ENSG00000068366	108867473	108976632	ENSP00000419171	ACSL4	-1	ACSL4_HUMAN	-	-	3'_UTR	NA	-	-	lod=218:545	-	-	-	het	1
4	X	108885821	C	+AT	ENST00000340800	ENSG00000068366	108867473	108976632	ENSP00000339787	ACSL4	-1	ACSL4_HUMAN	-	-	3'_UTR	NA	-	-	-	-	-	-	het	2
5	X	108885821	C	+AT	ENST00000348502	ENSG00000068366	108867473	108976632	ENSP00000262835	ACSL4	-1	ACSL4_HUMAN	-	-	3'_UTR	NA	-	-	-	-	-	-	het	2
6	X	108885821	C	+AT	ENST00000469796	ENSG00000068366	108867473	108976632	ENSP00000419171	ACSL4	-1	ACSL4_HUMAN	-	-	3'_UTR	NA	-	-	-	-	-	-	het	2
7	X	108886081	A	C	ENST00000340800	ENSG00000068366	108867473	108976632	ENSP00000339787	ACSL4	-1	ACSL4_HUMAN	-	-	3'_UTR	NA	-	-	-	-	-	-	het	1
8	X	108886081	A	C	ENST00000348502	ENSG00000068366	108867473	108976632	ENSP00000262835	ACSL4	-1	ACSL4_HUMAN	-	-	3'_UTR	NA	-	-	-	-	-	-	het	1
9	X	108886081	A	C	ENST00000469796	ENSG00000068366	108867473	108976632	ENSP00000419171	ACSL4	-1	ACSL4_HUMAN	-	-	3'_UTR	NA	-	-	-	-	-	-	het	1
10	X	108886114	A	G	ENST00000340800	ENSG00000068366	108867473	108976632	ENSP00000339787	ACSL4	-1	ACSL4_HUMAN	-	-	3'_UTR	rs111616134	0.0371	-	-	-	-	-	hom	1
11	X	108886114	A	G	ENST00000340800	ENSG00000068366	108867473	108976632	ENSP00000339787	ACSL4	-1	ACSL4_HUMAN	-	-	3'_UTR	rs111616134	0.0371	-	-	-	-	-	het	2
12	X	108886114	A	G	ENST00000348502	ENSG00000068366	108867473	108976632	ENSP00000262835	ACSL4	-1	ACSL4_HUMAN	-	-	3'_UTR	rs111616134	0.0371	-	-	-	-	-	hom	1
13	X	108886114	A	G	ENST00000348502	ENSG00000068366	108867473	108976632	ENSP00000262835	ACSL4	-1	ACSL4_HUMAN	-	-	3'_UTR	rs111616134	0.0371	-	-	-	-	-	het	2
14	X	108886114	A	G	ENST00000469796	ENSG00000068366	108867473	108976632	ENSP00000419171	ACSL4	-1	ACSL4_HUMAN	-	-	3'_UTR	rs111616134	0.0371	-	-	-	-	-	hom	1
15	X	108886114	A	G	ENST00000469796	ENSG00000068366	108867473	108976632	ENSP00000419171	ACSL4	-1	ACSL4_HUMAN	-	-	3'_UTR	rs111616134	0.0371	-	-	-	-	-	het	2
16	X	108886181	G	A	ENST00000340800	ENSG00000068366	108867473	108976632	ENSP00000339787	ACSL4	-1	ACSL4_HUMAN	-	-	3'_UTR	NA	-	-	lod=19:284	-	-	-	hom	2
17	X	108886181	G	A	ENST00000348502	ENSG00000068366	108867473	108976632	ENSP00000262835	ACSL4	-1	ACSL4_HUMAN	-	-	3'_UTR	NA	-	-	lod=19:284	-	-	-	hom	2
18	X	108886181	G	A	ENST00000469796	ENSG00000068366	108867473	108976632	ENSP00000419171	ACSL4	-1	ACSL4_HUMAN	-	-	3'_UTR	NA	-	-	lod=19:284	-	-	-	hom	2
19	X	108886280	T	C	ENST00000340800	ENSG00000068366	108867473	108976632	ENSP00000339787	ACSL4	-1	ACSL4_HUMAN	-	-	3'_UTR	NA	-	-	-	-	-	-	het	1
20	X	108886280	T	C	ENST00000340800	ENSG00000068366	108867473	108976632	ENSP00000339787	ACSL4	-1	ACSL4_HUMAN	-	-	3'_UTR	NA	-	-	-	-	-	-	hom	1

** A friendly reminder: guest user can access up to first 20 entries per gene from MSeqDR Master Exome Data Set M1. To gain access to the full power of MSeqDR, please login, or register, then request access to data.

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Select a dataset from the above drop-down list,
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Transcripts and variants in the surrounding ACSL4 X:108867473..108976632 region Gbrowse