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MSeqDR Data Summary for the Term TREM2:
Ensembl Gene IDAssociated Gene NameLSDB GenesLSDB VariantsclinVar hitsEnsembl Gene IDEnsembl Transcript IDEnsembl Protein IDDescriptionChrGene StartGene EndStrandBandTranscript Start bpTranscript End bpAssociated Gene NameAssociated Transcript NameAssociated Gene DBAssociated Transcript DBTranscript countpct GC contentGene BiotypeTranscript BiotypeSource GeneSource TranscriptStatus geneStatus transcript EntrezGene IDHGNC IDHGNC SymbolRefSeq mRNASeq region id
ENSG00000095970 MSeqDR Search EnsemblTREM20015ENSG00000095970ENST00000373122ENSP00000362214triggering receptor expressed on myeloid cells 2 [Source:HGNC Symbol;Acc:17761]64112624441130924-1p21.14112624441130841TREM2TREM2-003HGNC SymbolHGNC transcript name354.22protein_codingprotein_codingensembl_havahavanaKNOWNKNOWN5420917761TREM227515


MSeqDR Master Exome Data Set M1: 43 entries from same gene

No.ChrPositionReferenceVariantEnsemblTranscriptIDEnsemblGeneIDGene_StartGene_EndEnsemblProteinIDGenestrandUniprotcChangepChangeNaturedbSNPFreqEVSphastConsSIFTPolyphenHGMDtypesamples
1641126268GAENST00000338469ENSG000000959704112624441130924ENSP00000342651TREM2-1TREM2_HUMAN--3'_UTRNA------het4
2641126268GAENST00000373113ENSG000000959704112624441130924ENSP00000362205TREM2-1TREM2_HUMAN--3'_UTRNA------het4
3641126268GAENST00000373122ENSG000000959704112624441130924ENSP00000362214TREM2-1TREM2_HUMAN--3'_UTRNA------het4
4641126429CTENST00000338469ENSG000000959704112624441130924ENSP00000342651TREM2-1TREM2_HUMANc.572G>Ap.W191*non-synrs22342580.0251T=2/C=3180;T=43/C=1341;T=45/C=4521----het1
5641126429CTENST00000373113ENSG000000959704112624441130924ENSP00000362205TREM2-1TREM2_HUMAN--3'_UTRrs22342580.0251T=2/C=3180;T=43/C=1341;T=45/C=4521----het1
6641126429CTENST00000373122ENSG000000959704112624441130924ENSP00000362214TREM2-1TREM2_HUMAN--3'_UTRrs22342580.0251T=2/C=3180;T=43/C=1341;T=45/C=4521----het1
7641126472CTENST00000338469ENSG000000959704112624441130924ENSP00000342651TREM2-1TREM2_HUMANc.529G>Ap.E177Knon-synrs752729590.0034T=0/C=8600;T=1/C=4405;T=1/C=13005-TOLERATED--het2
8641126472CTENST00000373113ENSG000000959704112624441130924ENSP00000362205TREM2-1TREM2_HUMAN--3'_UTRrs752729590.0034T=0/C=8600;T=1/C=4405;T=1/C=13005-TOLERATED--het2
9641126472CTENST00000373122ENSG000000959704112624441130924ENSP00000362214TREM2-1TREM2_HUMAN--3'_UTRrs752729590.0034T=0/C=8600;T=1/C=4405;T=1/C=13005-TOLERATED--het2
10641126619GAENST00000373113ENSG000000959704112624441130924ENSP00000362205TREM2-1TREM2_HUMANc.668C>Tp.T223Inon-synrs138355759-A=6/G=8594;A=1/G=4405;A=7/G=12999--B-het2
11641126619GAENST00000373122ENSG000000959704112624441130924ENSP00000362214TREM2-1TREM2_HUMAN--3'_UTRrs138355759-A=6/G=8594;A=1/G=4405;A=7/G=12999--B-het2
12641126655AGENST00000373113ENSG000000959704112624441130924ENSP00000362205TREM2-1TREM2_HUMANc.632T>Cp.L211Pnon-synrs22342560.0753G=12/A=8588;G=513/A=3893;G=525/A=12481--B-het18
13641126655AGENST00000373122ENSG000000959704112624441130924ENSP00000362214TREM2-1TREM2_HUMAN--3'_UTRrs22342560.0753G=12/A=8588;G=513/A=3893;G=525/A=12481--B-het18
14641127543GAENST00000338469ENSG000000959704112624441130924ENSP00000342651TREM2-1TREM2_HUMANc.469C>Tp.H157Ynon-synrs22342550.003A=0/G=8600;A=2/G=4404;A=2/G=13004lod=61:409DAMAGINGD-het7
15641127543GAENST00000373113ENSG000000959704112624441130924ENSP00000362205TREM2-1TREM2_HUMANc.469C>Tp.H157Ynon-synrs22342550.003A=0/G=8600;A=2/G=4404;A=2/G=13004lod=61:409DAMAGINGD-het7
16641127543GAENST00000373122ENSG000000959704112624441130924ENSP00000362214TREM2-1TREM2_HUMANc.469C>Tp.H157Ynon-synrs22342550.003A=0/G=8600;A=2/G=4404;A=2/G=13004lod=61:409DAMAGINGD-het7
17641127550AGENST00000338469ENSG000000959704112624441130924ENSP00000342651TREM2-1TREM2_HUMANc.462T>Cp.H154HsynNA------het2
18641127550AGENST00000373113ENSG000000959704112624441130924ENSP00000362205TREM2-1TREM2_HUMANc.462T>Cp.H154HsynNA------het2
19641127550AGENST00000373122ENSG000000959704112624441130924ENSP00000362214TREM2-1TREM2_HUMANc.462T>Cp.H154HsynNA------het2
20641129100GTENST00000338469ENSG000000959704112624441130924ENSP00000342651TREM2-1TREM2_HUMANc.292C>Ap.R98RsynNA-A=0/G=8600;A=1/G=4405;A=1/G=13005----het1
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       Transcripts and variants in the surrounding TREM2 6:41126244..41130924 region Gbrowse