MSeqDR Central Portal

MSeqDR Data Summary for the Term LRP4:
Ensembl Gene IDAssociated Gene NameLSDB GenesLSDB VariantsclinVar hitsEnsembl Gene IDEnsembl Transcript IDEnsembl Protein IDDescriptionChrGene StartGene EndStrandBandTranscript Start bpTranscript End bpAssociated Gene NameAssociated Transcript NameAssociated Gene DBAssociated Transcript DBTranscript countpct GC contentGene BiotypeTranscript BiotypeSource GeneSource TranscriptStatus geneStatus transcript EntrezGene IDHGNC IDHGNC SymbolRefSeq mRNASeq region id
ENSG00000134569 MSeqDR Search EnsemblLRP40014ENSG00000134569ENST00000378623ENSP00000367888low density lipoprotein receptor-related protein 4 [Source:HGNC Symbol;Acc:6696]114687841946940193-1p11.24687841946940173LRP4LRP4-001HGNC SymbolHGNC transcript name548.69protein_codingprotein_codingensembl_havaensembl_havaKNOWNKNOWN40386696LRP4NM_00233427504


MSeqDR Master Exome Data Set M1: 170 entries from same gene

No.ChrPositionReferenceVariantEnsemblTranscriptIDEnsemblGeneIDGene_StartGene_EndEnsemblProteinIDGenestrandUniprotcChangepChangeNaturedbSNPFreqEVSphastConsSIFTPolyphenHGMDtypesamples
11146878430GCENST00000378623ENSG000001345694687841946940193ENSP00000367888LRP4-1LRP4_HUMAN--3'_UTRrs79286280.0664-lod=1286:734---het6
21146878430GCENST00000529604ENSG000001345694687841946940193-LRP4-1-c.2765C>Gp.A922Gnon-synrs79286280.0664-lod=1286:734---het6
31146878684CTENST00000378623ENSG000001345694687841946940193ENSP00000367888LRP4-1LRP4_HUMAN--3'_UTRrs23060340.0186-----het1
41146878684CTENST00000529604ENSG000001345694687841946940193-LRP4-1-c.2511G>Ap.L837Lsynrs23060340.0186-----het1
51146878707T-ACENST00000378623ENSG000001345694687841946940193ENSP00000367888LRP4-1LRP4_HUMAN--3'_UTRrs147363340------het9
61146878707T-ACENST00000529604ENSG000001345694687841946940193-LRP4-1-c.2486_2487delp.S829NAnon-synrs147363340------het9
71146878729GAENST00000378623ENSG000001345694687841946940193ENSP00000367888LRP4-1LRP4_HUMAN--3'_UTRrs64857010.99907-----hom658
81146878729GAENST00000378623ENSG000001345694687841946940193ENSP00000367888LRP4-1LRP4_HUMAN--3'_UTRrs64857010.99907-----het1
91146878729GAENST00000529604ENSG000001345694687841946940193-LRP4-1-c.2466C>Tp.H822Hsynrs64857010.99907-----hom658
101146878729GAENST00000529604ENSG000001345694687841946940193-LRP4-1-c.2466C>Tp.H822Hsynrs64857010.99907-----het1
111146878854TGENST00000378623ENSG000001345694687841946940193ENSP00000367888LRP4-1LRP4_HUMAN--3'_UTRNA------het3
121146878854TGENST00000529604ENSG000001345694687841946940193-LRP4-1-c.2341A>Cp.R781RsynNA------het3
131146879089TCENST00000378623ENSG000001345694687841946940193ENSP00000367888LRP4-1LRP4_HUMAN--3'_UTRrs755588830.0302-----het28
141146879089TCENST00000378623ENSG000001345694687841946940193ENSP00000367888LRP4-1LRP4_HUMAN--3'_UTRrs755588830.0302-----hom3
151146879089TCENST00000529604ENSG000001345694687841946940193-LRP4-1-c.2106A>Gp.*702*synrs755588830.0302-----het28
161146879089TCENST00000529604ENSG000001345694687841946940193-LRP4-1-c.2106A>Gp.*702*synrs755588830.0302-----hom3
171146879129C-CAENST00000378623ENSG000001345694687841946940193ENSP00000367888LRP4-1LRP4_HUMAN--3'_UTRNA--lod=22:300---het1
181146879129C-CAENST00000529604ENSG000001345694687841946940193-LRP4-1-c.2064_2065delp.G689NAnon-synNA--lod=22:300---het1
191146879308CGENST00000378623ENSG000001345694687841946940193ENSP00000367888LRP4-1LRP4_HUMAN--3'_UTRNA------het1
201146879308CGENST00000529604ENSG000001345694687841946940193-LRP4-1-c.1887G>Cp.W629Cnon-synNA------het1
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       Transcripts and variants in the surrounding LRP4 11:46878419..46940193 region Gbrowse