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MSeqDR Data Summary for the Term KRT16:
Ensembl Gene IDAssociated Gene NameLSDB GenesLSDB VariantsclinVar hitsEnsembl Gene IDEnsembl Transcript IDEnsembl Protein IDDescriptionChrGene StartGene EndStrandBandTranscript Start bpTranscript End bpAssociated Gene NameAssociated Transcript NameAssociated Gene DBAssociated Transcript DBTranscript countpct GC contentGene BiotypeTranscript BiotypeSource GeneSource TranscriptStatus geneStatus transcript EntrezGene IDHGNC IDHGNC SymbolRefSeq mRNASeq region id
ENSG00000186832 MSeqDR Search EnsemblKRT160022ENSG00000186832ENST00000301653ENSP00000301653keratin 16 [Source:HGNC Symbol;Acc:6423]173976603039772151-1q21.23976603039769005KRT16KRT16-001HGNC SymbolHGNC transcript name459.38protein_codingprotein_codingensembl_havaensembl_havaKNOWNKNOWN38686423KRT16NM_00555727509


MSeqDR Master Exome Data Set M1: 54 entries from same gene

No.ChrPositionReferenceVariantEnsemblTranscriptIDEnsemblGeneIDGene_StartGene_EndEnsemblProteinIDGenestrandUniprotcChangepChangeNaturedbSNPFreqEVSphastConsSIFTPolyphenHGMDtypesamples
11739766102CTENST00000301653ENSG000001868323976603039772151ENSP00000301653KRT16-1K1C16_HUMAN--3'_UTRNA------het1
21739766504AGENST00000301653ENSG000001868323976603039772151ENSP00000301653KRT16-1K1C16_HUMAN---16bp 3'_splice_siters74068990.9652G=8204/A=394;G=4366/A=40;G=12570/A=434----hom436
31739766504AGENST00000301653ENSG000001868323976603039772151ENSP00000301653KRT16-1K1C16_HUMAN---16bp 3'_splice_siters74068990.9652G=8204/A=394;G=4366/A=40;G=12570/A=434----het34
41739766694CGENST00000301653ENSG000001868323976603039772151ENSP00000301653KRT16-1K1C16_HUMANc.1169G>Cp.R390Pnon-synNA-G=1/C=8599;G=0/C=4406;G=1/C=13005lod=26:317-D-het1
51739766694CGENST00000593067ENSG000001868323976603039772151ENSP00000467124KRT16-1-c.455G>Cp.R152Pnon-synNA-G=1/C=8599;G=0/C=4406;G=1/C=13005lod=26:317-D-het1
61739766695GAENST00000301653ENSG000001868323976603039772151ENSP00000301653KRT16-1K1C16_HUMANc.1168C>Tp.R390Cnon-synrs141569849--lod=26:317-D-het3
71739766695GAENST00000593067ENSG000001868323976603039772151ENSP00000467124KRT16-1-c.454C>Tp.R152Cnon-synrs141569849--lod=26:317-D-het3
81739767105CTENST00000301653ENSG000001868323976603039772151ENSP00000301653KRT16-1K1C16_HUMAN--+1bp 5'_splice_siteNA--lod=148:503---het1
91739767105CTENST00000593067ENSG000001868323976603039772151ENSP00000467124KRT16-1---+1bp 5'_splice_siteNA--lod=148:503---het1
101739767136CTENST00000301653ENSG000001868323976603039772151ENSP00000301653KRT16-1K1C16_HUMANc.1029G>Ap.L343LsynNA--lod=80:437---het1
111739767136CTENST00000593067ENSG000001868323976603039772151ENSP00000467124KRT16-1-c.315G>Ap.L105LsynNA--lod=80:437---het1
121739767329GAENST00000301653ENSG000001868323976603039772151ENSP00000301653KRT16-1K1C16_HUMANc.925C>Tp.L309Lsynrs1426683830.001A=7/G=8593;A=0/G=4406;A=7/G=12999lod=61:409---het2
131739767329GAENST00000593067ENSG000001868323976603039772151ENSP00000467124KRT16-1-c.211C>Tp.L71Lsynrs1426683830.001A=7/G=8593;A=0/G=4406;A=7/G=12999lod=61:409---het2
141739767367AGENST00000301653ENSG000001868323976603039772151ENSP00000301653KRT16-1K1C16_HUMANc.887T>Cp.M296Tnon-synrs1456490290.00193G=5/A=8595;G=0/A=4406;G=5/A=13001--D-het3
151739767367AGENST00000593067ENSG000001868323976603039772151ENSP00000467124KRT16-1-c.173T>Cp.M58Tnon-synrs1456490290.00193G=5/A=8595;G=0/A=4406;G=5/A=13001--D-het3
161739767594TCENST00000301653ENSG000001868323976603039772151ENSP00000301653KRT16-1K1C16_HUMAN--+3bp 5'_splice_siters1138908560.0179C=0/T=8600;C=31/T=4375;C=31/T=12975lod=65:415---het1
171739767594TCENST00000593067ENSG000001868323976603039772151ENSP00000467124KRT16-1---+3bp 5'_splice_siters1138908560.0179C=0/T=8600;C=31/T=4375;C=31/T=12975lod=65:415---het1
181739767706TCENST00000301653ENSG000001868323976603039772151ENSP00000301653KRT16-1K1C16_HUMANc.662A>Gp.N221Snon-synNA--lod=43:371-P-het1
191739767706TCENST00000593067ENSG000001868323976603039772151ENSP00000467124KRT16-1---5'_UTRNA--lod=43:371-P-het1
201739767724GCENST00000301653ENSG000001868323976603039772151ENSP00000301653KRT16-1K1C16_HUMANc.644C>Gp.T215Snon-synrs147423442-C=50/G=8550;C=6/G=4400;C=56/G=12950--B-het18
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       Transcripts and variants in the surrounding KRT16 17:39766030..39772151 region Gbrowse