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MSeqDR Data Summary for the Term EGF:
Ensembl Gene IDAssociated Gene NameLSDB GenesLSDB VariantsclinVar hitsEnsembl Gene IDEnsembl Transcript IDEnsembl Protein IDDescriptionChrGene StartGene EndStrandBandTranscript Start bpTranscript End bpAssociated Gene NameAssociated Transcript NameAssociated Gene DBAssociated Transcript DBTranscript countpct GC contentGene BiotypeTranscript BiotypeSource GeneSource TranscriptStatus geneStatus transcript EntrezGene IDHGNC IDHGNC SymbolRefSeq mRNASeq region id
ENSG00000138798 MSeqDR Search EnsemblEGF002ENSG00000138798ENST00000509793ENSP00000424316epidermal growth factor [Source:HGNC Symbol;Acc:3229]41108340401109334221q25110834040110933150EGFEGF-002HGNC SymbolHGNC transcript name1239.15protein_codingprotein_codingensembl_havaensembl_havaKNOWNKNOWN19503229EGFNM_00117813127524


MSeqDR Master Exome Data Set M1: 301 entries from same gene

No.ChrPositionReferenceVariantEnsemblTranscriptIDEnsemblGeneIDGene_StartGene_EndEnsemblProteinIDGenestrandUniprotcChangepChangeNaturedbSNPFreqEVSphastConsSIFTPolyphenHGMDtypesamples
14110834110AGENST00000265171ENSG00000138798110834040110933422ENSP00000265171EGF1EGF_HUMAN--5'_UTRrs44449030.6347---- Malignant melanoma, association withhet309
24110834110AGENST00000265171ENSG00000138798110834040110933422ENSP00000265171EGF1EGF_HUMAN--5'_UTRrs44449030.6347---- Malignant melanoma, association withhom120
34110834110AGENST00000509793ENSG00000138798110834040110933422ENSP00000424316EGF1EGF_HUMAN--5'_UTRrs44449030.6347---- Malignant melanoma, association withhet309
44110834110AGENST00000509793ENSG00000138798110834040110933422ENSP00000424316EGF1EGF_HUMAN--5'_UTRrs44449030.6347---- Malignant melanoma, association withhom120
54110834116AGENST00000265171ENSG00000138798110834040110933422ENSP00000265171EGF1EGF_HUMAN--5'_UTRNA--lod=21:295---het1
64110834116AGENST00000509793ENSG00000138798110834040110933422ENSP00000424316EGF1EGF_HUMAN--5'_UTRNA--lod=21:295---het1
74110834150CTENST00000265171ENSG00000138798110834040110933422ENSP00000265171EGF1EGF_HUMAN--5'_UTRrs115688470.0313-----het1
84110834150CTENST00000509793ENSG00000138798110834040110933422ENSP00000424316EGF1EGF_HUMAN--5'_UTRrs115688470.0313-----het1
94110834222TGENST00000265171ENSG00000138798110834040110933422ENSP00000265171EGF1EGF_HUMAN--5'_UTRNA------het2
104110834222TGENST00000509793ENSG00000138798110834040110933422ENSP00000424316EGF1EGF_HUMAN--5'_UTRNA------het2
114110834264GCENST00000265171ENSG00000138798110834040110933422ENSP00000265171EGF1EGF_HUMAN--5'_UTRNA------het1
124110834264GCENST00000509793ENSG00000138798110834040110933422ENSP00000424316EGF1EGF_HUMAN--5'_UTRNA------het1
134110834351CGENST00000265171ENSG00000138798110834040110933422ENSP00000265171EGF1EGF_HUMAN--5'_UTRNA------het1
144110834351CGENST00000509793ENSG00000138798110834040110933422ENSP00000424316EGF1EGF_HUMAN--5'_UTRNA------het1
154110834390GAENST00000265171ENSG00000138798110834040110933422ENSP00000265171EGF1EGF_HUMAN--5'_UTRrs11568848------het4
164110834390GAENST00000509793ENSG00000138798110834040110933422ENSP00000424316EGF1EGF_HUMAN--5'_UTRrs11568848------het4
174110834432CTENST00000265171ENSG00000138798110834040110933422ENSP00000265171EGF1EGF_HUMAN--5'_UTRrs1911445890.00288-----het2
184110834432CTENST00000503392ENSG00000138798110834040110933422ENSP00000421384EGF1---5'_UTRrs1911445890.00288-----het2
194110834432CTENST00000509793ENSG00000138798110834040110933422ENSP00000424316EGF1EGF_HUMAN--5'_UTRrs1911445890.00288-----het2
204110862023GAENST00000502723ENSG00000138798110834040110933422-EGF1-c.92G>Ap.W31*non-synrs100297650.0389-----het5
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       Transcripts and variants in the surrounding EGF 4:110834040..110933422 region Gbrowse