MSeqDR Central Portal

MSeqDR Data Summary for the Term CITED2:
Ensembl Gene IDAssociated Gene NameLSDB GenesLSDB VariantsclinVar hitsEnsembl Gene IDEnsembl Transcript IDEnsembl Protein IDDescriptionChrGene StartGene EndStrandBandTranscript Start bpTranscript End bpAssociated Gene NameAssociated Transcript NameAssociated Gene DBAssociated Transcript DBTranscript countpct GC contentGene BiotypeTranscript BiotypeSource GeneSource TranscriptStatus geneStatus transcript EntrezGene IDHGNC IDHGNC SymbolRefSeq mRNASeq region id
ENSG00000164442 MSeqDR Search EnsemblCITED2000ENSG00000164442ENST00000367651ENSP00000356623Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 [Source:HGNC Symbol;Acc:1987]6139693393139695757-1q24.1139693393139695757CITED2CITED2-001HGNC SymbolHGNC transcript name353.07protein_codingprotein_codingensembl_havaensembl_havaKNOWNKNOWN103701987CITED2NM_00607927515


MSeqDR Master Exome Data Set M1: 107 entries from same gene

No.ChrPositionReferenceVariantEnsemblTranscriptIDEnsemblGeneIDGene_StartGene_EndEnsemblProteinIDGenestrandUniprotcChangepChangeNaturedbSNPFreqEVSphastConsSIFTPolyphenHGMDtypesamples
16139693433GTENST00000367651ENSG00000164442139693393139695757ENSP00000356623CITED2-1CITE2_HUMAN--3'_UTRrs758049130.0315-lod=3192:832---het29
26139693433GTENST00000536159ENSG00000164442139693393139695757ENSP00000442831CITED2-1CITE2_HUMAN--3'_UTRrs758049130.0315-lod=3192:832---het29
36139693433GTENST00000537332ENSG00000164442139693393139695757ENSP00000444198CITED2-1CITE2_HUMAN--3'_UTRrs758049130.0315-lod=3192:832---het29
46139693481CTENST00000367651ENSG00000164442139693393139695757ENSP00000356623CITED2-1CITE2_HUMAN--3'_UTRNA--lod=3192:832---het2
56139693481CTENST00000536159ENSG00000164442139693393139695757ENSP00000442831CITED2-1CITE2_HUMAN--3'_UTRNA--lod=3192:832---het2
66139693481CTENST00000537332ENSG00000164442139693393139695757ENSP00000444198CITED2-1CITE2_HUMAN--3'_UTRNA--lod=3192:832---het2
76139693582T-AAAENST00000367651ENSG00000164442139693393139695757ENSP00000356623CITED2-1CITE2_HUMAN--3'_UTRrs58995027--lod=3192:832---hom34
86139693582T-AAAENST00000367651ENSG00000164442139693393139695757ENSP00000356623CITED2-1CITE2_HUMAN--3'_UTRrs58995027--lod=3192:832---het137
96139693582T-AAAENST00000536159ENSG00000164442139693393139695757ENSP00000442831CITED2-1CITE2_HUMAN--3'_UTRrs58995027--lod=3192:832---hom34
106139693582T-AAAENST00000536159ENSG00000164442139693393139695757ENSP00000442831CITED2-1CITE2_HUMAN--3'_UTRrs58995027--lod=3192:832---het137
116139693582T-AAAENST00000537332ENSG00000164442139693393139695757ENSP00000444198CITED2-1CITE2_HUMAN--3'_UTRrs58995027--lod=3192:832---hom34
126139693582T-AAAENST00000537332ENSG00000164442139693393139695757ENSP00000444198CITED2-1CITE2_HUMAN--3'_UTRrs58995027--lod=3192:832---het137
136139693649T-GENST00000367651ENSG00000164442139693393139695757ENSP00000356623CITED2-1CITE2_HUMAN--3'_UTRNA--lod=3192:832---hom1
146139693649T+GENST00000367651ENSG00000164442139693393139695757ENSP00000356623CITED2-1CITE2_HUMAN--3'_UTRrs201308258--lod=3192:832---het2
156139693649T-GENST00000536159ENSG00000164442139693393139695757ENSP00000442831CITED2-1CITE2_HUMAN--3'_UTRNA--lod=3192:832---hom1
166139693649T+GENST00000536159ENSG00000164442139693393139695757ENSP00000442831CITED2-1CITE2_HUMAN--3'_UTRrs201308258--lod=3192:832---het2
176139693649T-GENST00000537332ENSG00000164442139693393139695757ENSP00000444198CITED2-1CITE2_HUMAN--3'_UTRNA--lod=3192:832---hom1
186139693649T+GENST00000537332ENSG00000164442139693393139695757ENSP00000444198CITED2-1CITE2_HUMAN--3'_UTRrs201308258--lod=3192:832---het2
196139693746TAENST00000367651ENSG00000164442139693393139695757ENSP00000356623CITED2-1CITE2_HUMAN--3'_UTRrs77638700.0481-lod=3192:832---het28
206139693746TAENST00000536159ENSG00000164442139693393139695757ENSP00000442831CITED2-1CITE2_HUMAN--3'_UTRrs77638700.0481-lod=3192:832---het28
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       Transcripts and variants in the surrounding CITED2 6:139693393..139695757 region Gbrowse