MSeqDR Central Portal

MSeqDR Data Summary for the Term TLR5:
Ensembl Gene IDAssociated Gene NameLSDB GenesLSDB VariantsclinVar hitsEnsembl Gene IDEnsembl Transcript IDEnsembl Protein IDDescriptionChrGene StartGene EndStrandBandTranscript Start bpTranscript End bpAssociated Gene NameAssociated Transcript NameAssociated Gene DBAssociated Transcript DBTranscript countpct GC contentGene BiotypeTranscript BiotypeSource GeneSource TranscriptStatus geneStatus transcript EntrezGene IDHGNC IDHGNC SymbolRefSeq mRNASeq region id
ENSG00000187554 MSeqDR Search EnsemblTLR5002ENSG00000187554ENST00000366881ENSP00000355846toll-like receptor 5 [Source:HGNC Symbol;Acc:11851]1223282748223316624-1q41223283647223316624TLR5TLR5-001HGNC SymbolHGNC transcript name646.61protein_codingprotein_codingensembl_havahavanaKNOWNKNOWN710011851TLR5NM_00326827511


MSeqDR Master Exome Data Set M1: 122 entries from same gene

No.ChrPositionReferenceVariantEnsemblTranscriptIDEnsemblGeneIDGene_StartGene_EndEnsemblProteinIDGenestrandUniprotcChangepChangeNaturedbSNPFreqEVSphastConsSIFTPolyphenHGMDtypesamples
11223283653CTENST00000366881ENSG00000187554223282748223316624ENSP00000355846TLR5-1TLR5_HUMAN--3'_UTRrs57441790.0057-----het1
21223283653CTENST00000540964ENSG00000187554223282748223316624ENSP00000440643TLR5-1TLR5_HUMAN--3'_UTRrs57441790.0057-----het1
31223283694G+AENST00000366881ENSG00000187554223282748223316624ENSP00000355846TLR5-1TLR5_HUMAN--3'_UTRNA------het1
41223283694G+AENST00000540964ENSG00000187554223282748223316624ENSP00000440643TLR5-1TLR5_HUMAN--3'_UTRNA------het1
51223283761TCENST00000342210ENSG00000187554223282748223316624ENSP00000340089TLR5-1TLR5_HUMAN--3'_UTRrs57441780.0057C=0/T=8600;C=48/T=4358;C=48/T=12958----het1
61223283761TCENST00000366881ENSG00000187554223282748223316624ENSP00000355846TLR5-1TLR5_HUMAN--3'_UTRrs57441780.0057C=0/T=8600;C=48/T=4358;C=48/T=12958----het1
71223283761TCENST00000540964ENSG00000187554223282748223316624ENSP00000440643TLR5-1TLR5_HUMAN--3'_UTRrs57441780.0057C=0/T=8600;C=48/T=4358;C=48/T=12958----het1
81223283837TCENST00000342210ENSG00000187554223282748223316624ENSP00000340089TLR5-1TLR5_HUMANc.2537A>Gp.D846Gnon-synrs57441770.00543C=87/T=8513;C=36/T=4370;C=123/T=12883-TOLERATEDP-het22
91223283837TCENST00000342210ENSG00000187554223282748223316624ENSP00000340089TLR5-1TLR5_HUMANc.2537A>Gp.D846Gnon-synrs57441770.00543C=87/T=8513;C=36/T=4370;C=123/T=12883-TOLERATEDP-hom1
101223283837TCENST00000366881ENSG00000187554223282748223316624ENSP00000355846TLR5-1TLR5_HUMANc.2537A>Gp.D846Gnon-synrs57441770.00543C=87/T=8513;C=36/T=4370;C=123/T=12883-TOLERATEDP-het22
111223283837TCENST00000366881ENSG00000187554223282748223316624ENSP00000355846TLR5-1TLR5_HUMANc.2537A>Gp.D846Gnon-synrs57441770.00543C=87/T=8513;C=36/T=4370;C=123/T=12883-TOLERATEDP-hom1
121223283837TCENST00000540964ENSG00000187554223282748223316624ENSP00000440643TLR5-1TLR5_HUMANc.2537A>Gp.D846Gnon-synrs57441770.00543C=87/T=8513;C=36/T=4370;C=123/T=12883-TOLERATEDP-het22
131223283837TCENST00000540964ENSG00000187554223282748223316624ENSP00000440643TLR5-1TLR5_HUMANc.2537A>Gp.D846Gnon-synrs57441770.00543C=87/T=8513;C=36/T=4370;C=123/T=12883-TOLERATEDP-hom1
141223283851TCENST00000342210ENSG00000187554223282748223316624ENSP00000340089TLR5-1TLR5_HUMANc.2523A>Gp.K841Ksynrs10539540.08743C=880/T=7720;C=67/T=4339;C=947/T=12059----het120
151223283851TCENST00000342210ENSG00000187554223282748223316624ENSP00000340089TLR5-1TLR5_HUMANc.2523A>Gp.K841Ksynrs10539540.08743C=880/T=7720;C=67/T=4339;C=947/T=12059----hom11
161223283851TCENST00000366881ENSG00000187554223282748223316624ENSP00000355846TLR5-1TLR5_HUMANc.2523A>Gp.K841Ksynrs10539540.08743C=880/T=7720;C=67/T=4339;C=947/T=12059----het120
171223283851TCENST00000366881ENSG00000187554223282748223316624ENSP00000355846TLR5-1TLR5_HUMANc.2523A>Gp.K841Ksynrs10539540.08743C=880/T=7720;C=67/T=4339;C=947/T=12059----hom11
181223283851TCENST00000540964ENSG00000187554223282748223316624ENSP00000440643TLR5-1TLR5_HUMANc.2523A>Gp.K841Ksynrs10539540.08743C=880/T=7720;C=67/T=4339;C=947/T=12059----het120
191223283851TCENST00000540964ENSG00000187554223282748223316624ENSP00000440643TLR5-1TLR5_HUMANc.2523A>Gp.K841Ksynrs10539540.08743C=880/T=7720;C=67/T=4339;C=947/T=12059----hom11
201223283881TCENST00000342210ENSG00000187554223282748223316624ENSP00000340089TLR5-1TLR5_HUMANc.2493A>Gp.K831Ksynrs752838140.00457C=86/T=8514;C=12/T=4394;C=98/T=12908lod=27:321---het18
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       Transcripts and variants in the surrounding TLR5 1:223282748..223316624 region Gbrowse