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MSeqDR Data Summary for the Term PDCD1:
Ensembl Gene IDAssociated Gene NameLSDB GenesLSDB VariantsclinVar hitsEnsembl Gene IDEnsembl Transcript IDEnsembl Protein IDDescriptionChrGene StartGene EndStrandBandTranscript Start bpTranscript End bpAssociated Gene NameAssociated Transcript NameAssociated Gene DBAssociated Transcript DBTranscript countpct GC contentGene BiotypeTranscript BiotypeSource GeneSource TranscriptStatus geneStatus transcript EntrezGene IDHGNC IDHGNC SymbolRefSeq mRNASeq region id
ENSG00000188389 MSeqDR Search EnsemblPDCD1001ENSG00000188389ENST00000334409ENSP00000335062programmed cell death 1 [Source:HGNC Symbol;Acc:8760]2242792033242801060-1q37.3242792033242801060PDCD1PDCD1-001HGNC SymbolHGNC transcript name363.14protein_codingprotein_codingensembl_havaensembl_havaKNOWNKNOWN51338760PDCD1NM_00501827508


MSeqDR Master Exome Data Set M1: 62 entries from same gene

No.ChrPositionReferenceVariantEnsemblTranscriptIDEnsemblGeneIDGene_StartGene_EndEnsemblProteinIDGenestrandUniprotcChangepChangeNaturedbSNPFreqEVSphastConsSIFTPolyphenHGMDtypesamples
12242792128CTENST00000334409ENSG00000188389242792033242801060ENSP00000335062PDCD1-1PDCD1_HUMAN--3'_UTRNA------het2
22242792207TGENST00000334409ENSG00000188389242792033242801060ENSP00000335062PDCD1-1PDCD1_HUMAN--3'_UTRNA------het4
32242792262GAENST00000334409ENSG00000188389242792033242801060ENSP00000335062PDCD1-1PDCD1_HUMAN--3'_UTRrs55704165------het1
42242792321CTENST00000334409ENSG00000188389242792033242801060ENSP00000335062PDCD1-1PDCD1_HUMAN--3'_UTRrs102045250.5584-----het137
52242792321CTENST00000334409ENSG00000188389242792033242801060ENSP00000335062PDCD1-1PDCD1_HUMAN--3'_UTRrs102045250.5584-----hom32
62242792328GAENST00000334409ENSG00000188389242792033242801060ENSP00000335062PDCD1-1PDCD1_HUMAN--3'_UTRNA------het3
72242792374CTENST00000334409ENSG00000188389242792033242801060ENSP00000335062PDCD1-1PDCD1_HUMAN--3'_UTRNA------het2
82242792590ATENST00000334409ENSG00000188389242792033242801060ENSP00000335062PDCD1-1PDCD1_HUMAN--3'_UTRrs414650460.0378-----het1
92242792748GAENST00000334409ENSG00000188389242792033242801060ENSP00000335062PDCD1-1PDCD1_HUMAN--3'_UTRrs66052600.0598-----hom1
102242792748GAENST00000334409ENSG00000188389242792033242801060ENSP00000335062PDCD1-1PDCD1_HUMAN--3'_UTRrs66052600.0598-----het5
112242792811CGENST00000334409ENSG00000188389242792033242801060ENSP00000335062PDCD1-1PDCD1_HUMAN--3'_UTRNA------het2
122242792851CTENST00000334409ENSG00000188389242792033242801060ENSP00000335062PDCD1-1PDCD1_HUMAN--3'_UTRrs66052590.0591-----het3
132242792851CTENST00000418831ENSG00000188389242792033242801060ENSP00000390296PDCD1-1---3'_UTRrs66052590.0591-----het3
142242792871CTENST00000334409ENSG00000188389242792033242801060ENSP00000335062PDCD1-1PDCD1_HUMAN--3'_UTRrs55844488------het5
152242792871CTENST00000334409ENSG00000188389242792033242801060ENSP00000335062PDCD1-1PDCD1_HUMAN--3'_UTRrs55844488------hom1
162242792871CTENST00000418831ENSG00000188389242792033242801060ENSP00000390296PDCD1-1---3'_UTRrs55844488------het5
172242792871CTENST00000418831ENSG00000188389242792033242801060ENSP00000390296PDCD1-1---3'_UTRrs55844488------hom1
182242792875G+GCAENST00000334409ENSG00000188389242792033242801060ENSP00000335062PDCD1-1PDCD1_HUMAN--3'_UTRNA------het5
192242792875G+GCAENST00000418831ENSG00000188389242792033242801060ENSP00000390296PDCD1-1---3'_UTRNA------het5
202242792962CGENST00000334409ENSG00000188389242792033242801060ENSP00000335062PDCD1-1PDCD1_HUMAN--3'_UTRNA------het1
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       Transcripts and variants in the surrounding PDCD1 2:242792033..242801060 region Gbrowse