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MSeqDR Data Summary for the Term FAT4:
Ensembl Gene IDAssociated Gene NameLSDB GenesLSDB VariantsclinVar hitsEnsembl Gene IDEnsembl Transcript IDEnsembl Protein IDDescriptionChrGene StartGene EndStrandBandTranscript Start bpTranscript End bpAssociated Gene NameAssociated Transcript NameAssociated Gene DBAssociated Transcript DBTranscript countpct GC contentGene BiotypeTranscript BiotypeSource GeneSource TranscriptStatus geneStatus transcript EntrezGene IDHGNC IDHGNC SymbolRefSeq mRNASeq region id
ENSG00000196159 MSeqDR Search EnsemblFAT40012ENSG00000196159ENST00000394329ENSP00000377862FAT atypical cadherin 4 [Source:HGNC Symbol;Acc:23109]41262375541264140871q28.1126237554126414087FAT4FAT4-001HGNC SymbolHGNC transcript name334.44protein_codingprotein_codingensembl_havaensembl_havaKNOWNKNOWN7963323109FAT4NM_02458227524


MSeqDR Master Exome Data Set M1: 321 entries from same gene

No.ChrPositionReferenceVariantEnsemblTranscriptIDEnsemblGeneIDGene_StartGene_EndEnsemblProteinIDGenestrandUniprotcChangepChangeNaturedbSNPFreqEVSphastConsSIFTPolyphenHGMDtypesamples
14126237695CGENST00000394329ENSG00000196159126237554126414087ENSP00000377862FAT41FAT4_HUMANc.129C>Gp.A43AsynNA--lod=200:535---het1
24126237697ACENST00000394329ENSG00000196159126237554126414087ENSP00000377862FAT41FAT4_HUMANc.131A>Cp.E44Anon-synrs200221425-C=3/A=8245;C=0/A=3884;C=3/A=12129lod=200:535DAMAGINGP-het2
34126237751GCENST00000394329ENSG00000196159126237554126414087ENSP00000377862FAT41FAT4_HUMANc.185G>Cp.G62Anon-synrs201009019-C=13/G=8407;C=1/G=4175;C=14/G=12582lod=197:534DAMAGINGD-het5
44126237805TCENST00000394329ENSG00000196159126237554126414087ENSP00000377862FAT41FAT4_HUMANc.239T>Cp.L80Pnon-synNA--lod=900:696TOLERATEDD-het1
54126237961CAENST00000394329ENSG00000196159126237554126414087ENSP00000377862FAT41FAT4_HUMANc.395C>Ap.A132Dnon-synNA--lod=217:544DAMAGINGNA-het2
64126237971CTENST00000394329ENSG00000196159126237554126414087ENSP00000377862FAT41FAT4_HUMANc.405C>Tp.F135Fsynrs729287720.1895T=1818/C=6592;T=353/C=3723;T=2171/C=10315lod=67:419---het205
74126237971CTENST00000394329ENSG00000196159126237554126414087ENSP00000377862FAT41FAT4_HUMANc.405C>Tp.F135Fsynrs729287720.1895T=1818/C=6592;T=353/C=3723;T=2171/C=10315lod=67:419---hom36
84126238090GTENST00000394329ENSG00000196159126237554126414087ENSP00000377862FAT41FAT4_HUMANc.524G>Tp.R175Lnon-synrs1435343240.0063T=40/G=8348;T=5/G=4145;T=45/G=12493lod=113:474TOLERATEDD-het12
94126238207CTENST00000394329ENSG00000196159126237554126414087ENSP00000377862FAT41FAT4_HUMANc.641C>Tp.P214Lnon-synNA--lod=287:574TOLERATEDP-het1
104126238264AGENST00000394329ENSG00000196159126237554126414087ENSP00000377862FAT41FAT4_HUMANc.698A>Gp.Y233Cnon-synNA--lod=79:436DAMAGINGD-het3
114126238305CAENST00000394329ENSG00000196159126237554126414087ENSP00000377862FAT41FAT4_HUMANc.739C>Ap.P247Tnon-synrs1913298480.0043A=47/C=8255;A=4/C=3946;A=51/C=12201lod=210:541TOLERATEDD-het3
124126238397GAENST00000394329ENSG00000196159126237554126414087ENSP00000377862FAT41FAT4_HUMANc.831G>Ap.A277Asynrs1424900280.0194A=2/G=8244;A=4/G=3928;A=6/G=12172lod=367:600---het9
134126238431CGENST00000394329ENSG00000196159126237554126414087ENSP00000377862FAT41FAT4_HUMANc.865C>Gp.L289Vnon-synNA--lod=367:600DAMAGINGNA-het1
144126238431CGENST00000394329ENSG00000196159126237554126414087ENSP00000377862FAT41FAT4_HUMANc.865C>Gp.L289Vnon-synNA--lod=367:600DAMAGINGNA-hom1
154126238541GAENST00000394329ENSG00000196159126237554126414087ENSP00000377862FAT41FAT4_HUMANc.975G>Ap.A325AsynNA------het1
164126238667AGENST00000394329ENSG00000196159126237554126414087ENSP00000377862FAT41FAT4_HUMANc.1101A>Gp.V367Vsynrs576924480.0403G=2/A=8430;G=154/A=4028;G=156/A=12458lod=172:519---het4
174126238694GAENST00000394329ENSG00000196159126237554126414087ENSP00000377862FAT41FAT4_HUMANc.1128G>Ap.V376Vsynrs202216461-A=36/G=8384;A=4/G=4162;A=40/G=12546lod=113:474---het5
184126238838CAENST00000394329ENSG00000196159126237554126414087ENSP00000377862FAT41FAT4_HUMANc.1272C>Ap.S424Rnon-synNA--lod=601:653TOLERATEDB-het1
194126238862TCENST00000394329ENSG00000196159126237554126414087ENSP00000377862FAT41FAT4_HUMANc.1296T>Cp.P432PsynNA-C=1/T=8369;C=1/T=4053;C=2/T=12422lod=601:653---het1
204126238924ATENST00000394329ENSG00000196159126237554126414087ENSP00000377862FAT41FAT4_HUMANc.1358A>Tp.Q453Lnon-synrs68474540.4277T=3559/A=4781;T=2215/A=1847;T=5774/A=6628lod=44:374TOLERATEDB-het498
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       Transcripts and variants in the surrounding FAT4 4:126237554..126414087 region Gbrowse