Human Phenotype Ontology 
Grandparent Node:
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Abnormal nervous system morphology (HP:0012639)help
Parent Node:
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Abnormal myelination (HP:0012447)help
Parent Node:
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Morphological central nervous system abnormality (HP:0002011)help
..Starting node
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Abnormal CNS myelination (HP:0011400)help
Term ID: 11400
Name: Abnormal CNS myelination
Synonym: Abnormal formation of myelin sheaths
Definition: An abnormality of myelination of nerves in the central nervous system.
Comments:
Reference: HP:0011400
Genes and Diseases:
 
       Child Nodes:
........expandDelayed CNS myelination (HP:0002188) help
........expandLeukodystrophy (HP:0002415) help
................... HP:0003269 Sudanophilic leukodystrophy
................... HP:0006926 Metachromatic leukodystrophy variant
................... HP:0006978 Dysmyelinating leukodystrophy
........expandCNS hypomyelination (HP:0003429) help
................... HP:0006808 Cerebral hypomyelination
........expandCerebral dysmyelination (HP:0007266) help
........expandCNS demyelination (HP:0007305) help
................... HP:0002545 Patchy demyelination of subcortical white matter
................... HP:0007162 Diffuse demyelination of the cerebral white matter
................... HP:0007258 Severe demyelination of the white matter
................... HP:0008311 Spinal cord posterior columns myelin loss
........expandCNS hypermyelination (HP:0012754) help

 Sister Nodes: 
..expandAbnormal glial cell morphology (HP:0100705) help
..expandAbnormal meningeal morphology (HP:0010651) help
..expandAbnormal neural tube morphology (HP:0410043) help
..expandAbnormal subarachnoid space morphology (HP:0012703) help
..expandAbnormality of brain morphology (HP:0012443) help
..expandAbnormality of neuronal migration (HP:0002269) help
..expandAbnormality of the cerebrospinal fluid (HP:0002921) help
..expandAbnormality of the spinal cord (HP:0002143) help
..expandAlzheimer disease (HP:0002511) help
..expandAplasia/Hypoplasia involving the central nervous system (HP:0002977) help
..expandAtrophy/Degeneration affecting the central nervous system (HP:0007367) help
..expandCentral nervous system cyst (HP:0030724) help
..expandEncephalocele (HP:0002084) help
..expandMorphological abnormality of the pyramidal tract (HP:0002062) help
..expandNeoplasm of the central nervous system (HP:0100006) help
..expandUnusual CNS infection (HP:0011450) help
InputHPO IDHPO termDistanceGeneGene id entrezDiseaseIdDiseaseNameDiseaseMIMConceptIDSourceTypical associationHGMD variantsClinVar variantsHGNC IDGeneMIM
 
HPO disease - gene - phenotype typical associations:
HP:0011400HP:0011400Abnormal CNS myelination0ERCC3 CL E G H2071610651Xeroderma pigmentosum, complementation group b610651C1970808OMIM15233435133510
HP:0011400HP:0011400Abnormal CNS myelination0GAA CL E G H2548232300Glycogen storage disease, type II232300C0017921OMIM124424065606800
HP:0011400HP:0011400Abnormal CNS myelination0IDUA CL E G H3425607014Dysostosis multiplex607014C0086795OMIM117885391252800
HP:0011400HP:0011400Abnormal CNS myelination0KIDINS220 CL E G H57498521390ORPHA161729508615759
HP:0011400HP:0011400Abnormal CNS myelination0SHPK CL E G H23729440713ORPHA12321492605060
HP:0011400HP:0002415Leukodystrophy1ERCC3 CL E G H2071610651Xeroderma pigmentosum, complementation group b610651C1970808OMIM15233435133510
HP:0011400HP:0003429CNS hypomyelination1ERCC3 CL E G H2071610651Xeroderma pigmentosum, complementation group b610651C1970808OMIM15233435133510
HP:0011400HP:0002188Delayed CNS myelination1ERCC3 CL E G H2071610651Xeroderma pigmentosum, complementation group b610651C1970808OMIM15233435133510
HP:0011400HP:0012754CNS hypermyelination1ERCC3 CL E G H2071610651Xeroderma pigmentosum, complementation group b610651C1970808OMIM15233435133510
HP:0011400HP:0007305CNS demyelination1ERCC3 CL E G H2071610651Xeroderma pigmentosum, complementation group b610651C1970808OMIM15233435133510
HP:0011400HP:0007266Cerebral dysmyelination1ERCC3 CL E G H2071610651Xeroderma pigmentosum, complementation group b610651C1970808OMIM15233435133510
HP:0011400HP:0007305CNS demyelination1GAA CL E G H2548232300Glycogen storage disease, type II232300C0017921OMIM124424065606800
HP:0011400HP:0007266Cerebral dysmyelination1GAA CL E G H2548232300Glycogen storage disease, type II232300C0017921OMIM124424065606800
HP:0011400HP:0003429CNS hypomyelination1GAA CL E G H2548232300Glycogen storage disease, type II232300C0017921OMIM124424065606800
HP:0011400HP:0002415Leukodystrophy1GAA CL E G H2548232300Glycogen storage disease, type II232300C0017921OMIM124424065606800
HP:0011400HP:0012754CNS hypermyelination1GAA CL E G H2548232300Glycogen storage disease, type II232300C0017921OMIM124424065606800
HP:0011400HP:0002188Delayed CNS myelination1GAA CL E G H2548232300Glycogen storage disease, type II232300C0017921OMIM124424065606800
HP:0011400HP:0007266Cerebral dysmyelination1IDUA CL E G H3425607014Dysostosis multiplex607014C0086795OMIM117885391252800
HP:0011400HP:0002415Leukodystrophy1IDUA CL E G H3425607014Dysostosis multiplex607014C0086795OMIM117885391252800
HP:0011400HP:0003429CNS hypomyelination1IDUA CL E G H3425607014Dysostosis multiplex607014C0086795OMIM117885391252800
HP:0011400HP:0002188Delayed CNS myelination1IDUA CL E G H3425607014Dysostosis multiplex607014C0086795OMIM117885391252800
HP:0011400HP:0012754CNS hypermyelination1IDUA CL E G H3425607014Dysostosis multiplex607014C0086795OMIM117885391252800
HP:0011400HP:0007305CNS demyelination1IDUA CL E G H3425607014Dysostosis multiplex607014C0086795OMIM117885391252800
HP:0011400HP:0003429CNS hypomyelination1KIDINS220 CL E G H57498521390ORPHA161729508615759
HP:0011400HP:0002415Leukodystrophy1KIDINS220 CL E G H57498521390ORPHA161729508615759
HP:0011400HP:0012754CNS hypermyelination1KIDINS220 CL E G H57498521390ORPHA161729508615759
HP:0011400HP:0002188Delayed CNS myelination1KIDINS220 CL E G H57498521390ORPHA161729508615759
HP:0011400HP:0007305CNS demyelination1KIDINS220 CL E G H57498521390ORPHA161729508615759
HP:0011400HP:0007266Cerebral dysmyelination1KIDINS220 CL E G H57498521390ORPHA161729508615759
HP:0011400HP:0007305CNS demyelination1SHPK CL E G H23729440713ORPHA12321492605060
HP:0011400HP:0007266Cerebral dysmyelination1SHPK CL E G H23729440713ORPHA12321492605060
HP:0011400HP:0003429CNS hypomyelination1SHPK CL E G H23729440713ORPHA12321492605060
HP:0011400HP:0002415Leukodystrophy1SHPK CL E G H23729440713ORPHA12321492605060
HP:0011400HP:0012754CNS hypermyelination1SHPK CL E G H23729440713ORPHA12321492605060
HP:0011400HP:0002188Delayed CNS myelination1SHPK CL E G H23729440713ORPHA12321492605060
HP:0011400HP:0003269Sudanophilic leukodystrophy2ERCC3 CL E G H2071610651Xeroderma pigmentosum, complementation group b610651C1970808OMIM15233435133510
HP:0011400HP:0002545Patchy demyelination of subcortical white matter2ERCC3 CL E G H2071610651Xeroderma pigmentosum, complementation group b610651C1970808OMIM15233435133510
HP:0011400HP:0006926Metachromatic leukodystrophy variant2ERCC3 CL E G H2071610651Xeroderma pigmentosum, complementation group b610651C1970808OMIM15233435133510
HP:0011400HP:0007162Diffuse demyelination of the cerebral white matter2ERCC3 CL E G H2071610651Xeroderma pigmentosum, complementation group b610651C1970808OMIM15233435133510
HP:0011400HP:0006978Dysmyelinating leukodystrophy2ERCC3 CL E G H2071610651Xeroderma pigmentosum, complementation group b610651C1970808OMIM15233435133510
HP:0011400HP:0008311Spinal cord posterior columns myelin loss2ERCC3 CL E G H2071610651Xeroderma pigmentosum, complementation group b610651C1970808OMIM15233435133510
HP:0011400HP:0033846Spinal hypomyelination2ERCC3 CL E G H2071610651Xeroderma pigmentosum, complementation group b610651C1970808OMIM15233435133510
HP:0011400HP:0033369Cavitating leukodystrophy2ERCC3 CL E G H2071610651Xeroderma pigmentosum, complementation group b610651C1970808OMIM15233435133510
HP:0011400HP:0007258Severe demyelination of the white matter2ERCC3 CL E G H2071610651Xeroderma pigmentosum, complementation group b610651C1970808OMIM15233435133510
HP:0011400HP:0006808Cerebral hypomyelination2ERCC3 CL E G H2071610651Xeroderma pigmentosum, complementation group b610651C1970808OMIM15233435133510
HP:0011400HP:0033846Spinal hypomyelination2GAA CL E G H2548232300Glycogen storage disease, type II232300C0017921OMIM124424065606800
HP:0011400HP:0006978Dysmyelinating leukodystrophy2GAA CL E G H2548232300Glycogen storage disease, type II232300C0017921OMIM124424065606800
HP:0011400HP:0008311Spinal cord posterior columns myelin loss2GAA CL E G H2548232300Glycogen storage disease, type II232300C0017921OMIM124424065606800
HP:0011400HP:0006808Cerebral hypomyelination2GAA CL E G H2548232300Glycogen storage disease, type II232300C0017921OMIM124424065606800
HP:0011400HP:0033369Cavitating leukodystrophy2GAA CL E G H2548232300Glycogen storage disease, type II232300C0017921OMIM124424065606800
HP:0011400HP:0007258Severe demyelination of the white matter2GAA CL E G H2548232300Glycogen storage disease, type II232300C0017921OMIM124424065606800
HP:0011400HP:0003269Sudanophilic leukodystrophy2GAA CL E G H2548232300Glycogen storage disease, type II232300C0017921OMIM124424065606800
HP:0011400HP:0002545Patchy demyelination of subcortical white matter2GAA CL E G H2548232300Glycogen storage disease, type II232300C0017921OMIM124424065606800
HP:0011400HP:0006926Metachromatic leukodystrophy variant2GAA CL E G H2548232300Glycogen storage disease, type II232300C0017921OMIM124424065606800
HP:0011400HP:0007162Diffuse demyelination of the cerebral white matter2GAA CL E G H2548232300Glycogen storage disease, type II232300C0017921OMIM124424065606800
HP:0011400HP:0006808Cerebral hypomyelination2IDUA CL E G H3425607014Dysostosis multiplex607014C0086795OMIM117885391252800
HP:0011400HP:0033369Cavitating leukodystrophy2IDUA CL E G H3425607014Dysostosis multiplex607014C0086795OMIM117885391252800
HP:0011400HP:0007258Severe demyelination of the white matter2IDUA CL E G H3425607014Dysostosis multiplex607014C0086795OMIM117885391252800
HP:0011400HP:0003269Sudanophilic leukodystrophy2IDUA CL E G H3425607014Dysostosis multiplex607014C0086795OMIM117885391252800
HP:0011400HP:0002545Patchy demyelination of subcortical white matter2IDUA CL E G H3425607014Dysostosis multiplex607014C0086795OMIM117885391252800
HP:0011400HP:0006926Metachromatic leukodystrophy variant2IDUA CL E G H3425607014Dysostosis multiplex607014C0086795OMIM117885391252800
HP:0011400HP:0007162Diffuse demyelination of the cerebral white matter2IDUA CL E G H3425607014Dysostosis multiplex607014C0086795OMIM117885391252800
HP:0011400HP:0033846Spinal hypomyelination2IDUA CL E G H3425607014Dysostosis multiplex607014C0086795OMIM117885391252800
HP:0011400HP:0006978Dysmyelinating leukodystrophy2IDUA CL E G H3425607014Dysostosis multiplex607014C0086795OMIM117885391252800
HP:0011400HP:0008311Spinal cord posterior columns myelin loss2IDUA CL E G H3425607014Dysostosis multiplex607014C0086795OMIM117885391252800
HP:0011400HP:0002545Patchy demyelination of subcortical white matter2KIDINS220 CL E G H57498521390ORPHA161729508615759
HP:0011400HP:0003269Sudanophilic leukodystrophy2KIDINS220 CL E G H57498521390ORPHA161729508615759
HP:0011400HP:0007162Diffuse demyelination of the cerebral white matter2KIDINS220 CL E G H57498521390ORPHA161729508615759
HP:0011400HP:0006926Metachromatic leukodystrophy variant2KIDINS220 CL E G H57498521390ORPHA161729508615759
HP:0011400HP:0008311Spinal cord posterior columns myelin loss2KIDINS220 CL E G H57498521390ORPHA161729508615759
HP:0011400HP:0033846Spinal hypomyelination2KIDINS220 CL E G H57498521390ORPHA161729508615759
HP:0011400HP:0006978Dysmyelinating leukodystrophy2KIDINS220 CL E G H57498521390ORPHA161729508615759
HP:0011400HP:0007258Severe demyelination of the white matter2KIDINS220 CL E G H57498521390ORPHA161729508615759
HP:0011400HP:0006808Cerebral hypomyelination2KIDINS220 CL E G H57498521390ORPHA161729508615759
HP:0011400HP:0033369Cavitating leukodystrophy2KIDINS220 CL E G H57498521390ORPHA161729508615759
HP:0011400HP:0006978Dysmyelinating leukodystrophy2SHPK CL E G H23729440713ORPHA12321492605060
HP:0011400HP:0008311Spinal cord posterior columns myelin loss2SHPK CL E G H23729440713ORPHA12321492605060
HP:0011400HP:0033846Spinal hypomyelination2SHPK CL E G H23729440713ORPHA12321492605060
HP:0011400HP:0007258Severe demyelination of the white matter2SHPK CL E G H23729440713ORPHA12321492605060
HP:0011400HP:0006808Cerebral hypomyelination2SHPK CL E G H23729440713ORPHA12321492605060
HP:0011400HP:0033369Cavitating leukodystrophy2SHPK CL E G H23729440713ORPHA12321492605060
HP:0011400HP:0003269Sudanophilic leukodystrophy2SHPK CL E G H23729440713ORPHA12321492605060
HP:0011400HP:0002545Patchy demyelination of subcortical white matter2SHPK CL E G H23729440713ORPHA12321492605060
HP:0011400HP:0006926Metachromatic leukodystrophy variant2SHPK CL E G H23729440713ORPHA12321492605060
HP:0011400HP:0007162Diffuse demyelination of the cerebral white matter2SHPK CL E G H23729440713ORPHA12321492605060
 
HPO disease - gene - phenotype less frequent non-typical associations:
HP:0011400HP:0011400Abnormal CNS myelination0GPT2 CL E G H84706477673ANO5-Related DisordersCN239193ORPHA010918062138210
HP:0011400HP:0011400Abnormal CNS myelination0RNASET2 CL E G H8635612951Leukoencephalopathy, cystic, without megalencephaly612951C2751843OMIM019921686612944
HP:0011400HP:0007266Cerebral dysmyelination1GPT2 CL E G H84706477673ANO5-Related DisordersCN239193ORPHA010918062138210
HP:0011400HP:0003429CNS hypomyelination1GPT2 CL E G H84706477673ANO5-Related DisordersCN239193ORPHA010918062138210
HP:0011400HP:0002415Leukodystrophy1GPT2 CL E G H84706477673ANO5-Related DisordersCN239193ORPHA010918062138210
HP:0011400HP:0012754CNS hypermyelination1GPT2 CL E G H84706477673ANO5-Related DisordersCN239193ORPHA010918062138210
HP:0011400HP:0002188Delayed CNS myelination1GPT2 CL E G H84706477673ANO5-Related DisordersCN239193ORPHA010918062138210
HP:0011400HP:0007305CNS demyelination1GPT2 CL E G H84706477673ANO5-Related DisordersCN239193ORPHA010918062138210
HP:0011400HP:0012754CNS hypermyelination1RNASET2 CL E G H8635612951Leukoencephalopathy, cystic, without megalencephaly612951C2751843OMIM019921686612944
HP:0011400HP:0002188Delayed CNS myelination1RNASET2 CL E G H8635612951Leukoencephalopathy, cystic, without megalencephaly612951C2751843OMIM019921686612944
HP:0011400HP:0007305CNS demyelination1RNASET2 CL E G H8635612951Leukoencephalopathy, cystic, without megalencephaly612951C2751843OMIM019921686612944
HP:0011400HP:0007266Cerebral dysmyelination1RNASET2 CL E G H8635612951Leukoencephalopathy, cystic, without megalencephaly612951C2751843OMIM019921686612944
HP:0011400HP:0002415Leukodystrophy1RNASET2 CL E G H8635612951Leukoencephalopathy, cystic, without megalencephaly612951C2751843OMIM019921686612944
HP:0011400HP:0003429CNS hypomyelination1RNASET2 CL E G H8635612951Leukoencephalopathy, cystic, without megalencephaly612951C2751843OMIM019921686612944
HP:0011400HP:0007258Severe demyelination of the white matter2GPT2 CL E G H84706477673ANO5-Related DisordersCN239193ORPHA010918062138210
HP:0011400HP:0006808Cerebral hypomyelination2GPT2 CL E G H84706477673ANO5-Related DisordersCN239193ORPHA010918062138210
HP:0011400HP:0033369Cavitating leukodystrophy2GPT2 CL E G H84706477673ANO5-Related DisordersCN239193ORPHA010918062138210
HP:0011400HP:0003269Sudanophilic leukodystrophy2GPT2 CL E G H84706477673ANO5-Related DisordersCN239193ORPHA010918062138210
HP:0011400HP:0002545Patchy demyelination of subcortical white matter2GPT2 CL E G H84706477673ANO5-Related DisordersCN239193ORPHA010918062138210
HP:0011400HP:0006926Metachromatic leukodystrophy variant2GPT2 CL E G H84706477673ANO5-Related DisordersCN239193ORPHA010918062138210
HP:0011400HP:0007162Diffuse demyelination of the cerebral white matter2GPT2 CL E G H84706477673ANO5-Related DisordersCN239193ORPHA010918062138210
HP:0011400HP:0008311Spinal cord posterior columns myelin loss2GPT2 CL E G H84706477673ANO5-Related DisordersCN239193ORPHA010918062138210
HP:0011400HP:0033846Spinal hypomyelination2GPT2 CL E G H84706477673ANO5-Related DisordersCN239193ORPHA010918062138210
HP:0011400HP:0006978Dysmyelinating leukodystrophy2GPT2 CL E G H84706477673ANO5-Related DisordersCN239193ORPHA010918062138210
HP:0011400HP:0006926Metachromatic leukodystrophy variant2RNASET2 CL E G H8635612951Leukoencephalopathy, cystic, without megalencephaly612951C2751843OMIM019921686612944
HP:0011400HP:0007162Diffuse demyelination of the cerebral white matter2RNASET2 CL E G H8635612951Leukoencephalopathy, cystic, without megalencephaly612951C2751843OMIM019921686612944
HP:0011400HP:0006978Dysmyelinating leukodystrophy2RNASET2 CL E G H8635612951Leukoencephalopathy, cystic, without megalencephaly612951C2751843OMIM019921686612944
HP:0011400HP:0008311Spinal cord posterior columns myelin loss2RNASET2 CL E G H8635612951Leukoencephalopathy, cystic, without megalencephaly612951C2751843OMIM019921686612944
HP:0011400HP:0033846Spinal hypomyelination2RNASET2 CL E G H8635612951Leukoencephalopathy, cystic, without megalencephaly612951C2751843OMIM019921686612944
HP:0011400HP:0033369Cavitating leukodystrophy2RNASET2 CL E G H8635612951Leukoencephalopathy, cystic, without megalencephaly612951C2751843OMIM019921686612944
HP:0011400HP:0007258Severe demyelination of the white matter2RNASET2 CL E G H8635612951Leukoencephalopathy, cystic, without megalencephaly612951C2751843OMIM019921686612944
HP:0011400HP:0006808Cerebral hypomyelination2RNASET2 CL E G H8635612951Leukoencephalopathy, cystic, without megalencephaly612951C2751843OMIM019921686612944
HP:0011400HP:0003269Sudanophilic leukodystrophy2RNASET2 CL E G H8635612951Leukoencephalopathy, cystic, without megalencephaly612951C2751843OMIM019921686612944
HP:0011400HP:0002545Patchy demyelination of subcortical white matter2RNASET2 CL E G H8635612951Leukoencephalopathy, cystic, without megalencephaly612951C2751843OMIM019921686612944


Genes (156) :AARS ABAT ACER3 ACOX1 ACY1 ADAR ADGRG1 ADSL AHCY AIMP1 AIMP2 ALDH3A2 ALG9 ARSA ASPA ATP6V1A ATXN2 BCAP31 BCS1L BMP4 BOLA3 CNTNAP1 COX10 COX15 CSF1R CTC1 D2HGDH DAG1 DARS DDOST ECHS1 EDNRB EIF2B1 EIF2B2 EIF2B3 EIF2B4 EIF2B5 EPRS ERCC3 ERCC6 ERCC8 FA2H FAM126A FBXL4 FOXRED1 GAA GALC GAN GDAP1 GFAP GJC2 GLRX5 GLUL GPT2 HIKESHI HSD17B4 HSPD1 HTRA1 IBA57 IDUA IFIH1 INTU ISCA1 ISCA2 ITPA KDM1A KIDINS220 L2HGDH LIAS LIPT1 LMNB1 LRPPRC MAT1A MCOLN1 MMUT MTFMT MTTP NADK2 NDUFA10 NDUFA12 NDUFA13 NDUFA2 NDUFA4 NDUFA9 NDUFAF2 NDUFAF5 NDUFAF6 NDUFS1 NDUFS2 NDUFS3 NDUFS4 NDUFS7 NDUFS8 NDUFV1 NDUFV2 NKX6-2 NUBPL PC PDHA1 PDYN PET100 PEX1 PEX13 PEX16 PEX19 PEX7 PHGDH PLEKHG2 PLP1 PNPT1 POLR1C POLR3A POLR3B PRKDC PRPS1 PSAP PURA PYCR2 QARS RARS RBM8A RMND1 RNASEH2A RNASEH2B RNASEH2C RNASET2 SAMHD1 SDHA SHANK3 SHPK SLC12A5 SLC16A2 SLC19A3 SLC25A12 SLC33A1 SMG9 SNIP1 SNORD118 SOX10 SP110 SPATA5 SPTAN1 STXBP1 SUMF1 SURF1 TACO1 TBC1D24 TBCD TMEM106B TRAPPC11 TREX1 TUBB4A TUFM TXN2 UPB1 VPS11

Diseases (141) :610651 232300 477673 607014 521390 612951 440713 616339 613163 617762 264470 609924 51 615010 606854 103050 88618 260600 618006 270200 608776 309271 309263 309256 271900 618012 256000 607932 614299 618186 255241 221820 612199 600721 616538 615281 300536 277580 603896 617951 610532 615471 245200 643 214400 320401 608804 401866 616859 610015 616881 261515 612233 615330 617926 617613 616370 616647 616728 614462 169500 220111 250850 252650 251000 200100 431361 616034 618226 252010 527497 617560 618242 266150 610245 601539 614883 614877 614886 215100 601815 616763 312080 614932 88637 616494 447896 607694 614381 615966 611721 611722 249900 616158 616420 615760 616140 274000 614922 610333 612952 606232 616645 300523 614482 616920 614501 614561 609136 79124 616577 613477 272200 352596 617193 617964 615356 247691 612438 610678 616811 613161 466934 98756 369939 300475 133540 216400 612319 85163 203450 600142 236792 79351 264090 301835 438114 612949 611584 612164 616683
 

Human Phenotype Ontology(HPO) is developed by the Human Phenotype Ontology Consortium. The version used here is August 2021 release.