View genomic variant #0000021301

Chromosome 5
Allele Unknown
Affects function (as reported) Effect unknown
Affects function (by curator) Effect unknown
Type -
DNA change (genomic) (Relative to hg19 / GRCh37) g.52856471C>A
Published as -
GERP -
Segregation -
DB-ID NDUFS4_000018
MSCV MSCV_0021301
dbSNP ID -
Frequency -
Sources ; clinvar;
Reference -
Variant remarks -
Genetic origin -
Variant_disease -
Average frequency (large NGS studies) Variant not found in online data sets
Owner LOVD




Variant on transcripts

2 entries on 1 page. Showing entries 1 - 2.
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Gene     

Transcript ID     

AscendingTranscript     

Variant ID     

Affects function     

Location     

Exon     

DNA change (cDNA)     

Protein     

PolyPhen     

GVS function     

Splice distance     

SIFT     
NDUFS4 00000213 NM_002495.2 0000021301 ./. - - c.-22C>A p.(=) - - - -
NDUFS4 00000212 XM_005248525.1 0000021301 ./. - - c.-22C>A p.(=) - - - -
Legend  


ClinVar @ MSeqDR

RCVaccession RCV000268982; RCV000365896;
Chromosome 5:52856471..52856471
Allele frequencies from ExAC 0.00012
Allele frequencies from TGP 0.00080
ClinVar Allele ID 304530
Disease database name and identifier MONDO:MONDO:0009723, MedGen:C0023264, OMIM:256000, Orphanet:ORPHA506, SNOMED CT:29570005|MONDO:MONDO:0100224, MedGen:CN257533, OMIM:252010
ClinVar preferred disease name Leigh syndrome|Mitochondrial complex I deficiency, nuclear type 1
HGVS variant names NC 000005.9:g.52856471C>A
ClinVar review status criteria provided, single submitter
Clinical Significance Uncertain significance
Variant type single nucleotide variant
Sequence Ontology for variant type SO:0001483
Variant clinical sources reported Illumina Clinical Services Laboratory, Illumina:636951
Gene symbol:Gene id. NDUFS4:4724
Molecular consequence SO:0001619|non-coding transcript variant, SO:0001623|5 prime UTR variant
Allele origin germline
dbSNP ID 144843461
Variant Flags
:

ClinVar @ MSeqDR as full content XML tree

MSeqDR View Variant at Gbrowse

Mitomap Mitochondrial Variant Phenotype Information:

None

Ensembl Variant Phenotype Information:

None