View genomic variant #0000015822
Chromosome |
10 |
Allele |
Unknown |
Affects function (as reported) |
Effect unknown |
Affects function (by curator) |
Effect unknown |
Type |
- |
DNA change (genomic) (Relative to hg19 / GRCh37) |
g.43613884A>C |
Published as |
- |
GERP |
- |
Segregation |
- |
DB-ID |
RET_000049 |
MSCV |
MSCV_0015822 |
dbSNP ID |
- |
Frequency |
- |
Sources |
; clinvar; |
Reference |
- |
Variant remarks |
- |
Genetic origin |
- |
Variant_disease |
- |
Average frequency (large NGS studies) |
Variant not found in online data sets |
Owner |
LOVD |
Variant on transcripts
ClinVar @ MSeqDR | RCVaccession | RCV000121980; RCV000412123; RCV000410090; RCV000540063; RCV000561957; RCV000724767; RCV003390808; RCV003460859; | Chromosome | 10:43613884..43613884 | ClinVar Allele ID | 138917 | Disease database name and identifier | .|MONDO:MONDO:0015356, MeSH:D009386, MedGen:C0027672, Orphanet:140162|MedGen:CN169374|MedGen:C3661900|MONDO:MONDO:0019003, MedGen:C4048306, Orphanet:653|MONDO:MONDO:0008234, MeSH:D018813, MedGen:C0025268, OMIM:171400, Orphanet:247698, Orphanet:653|MONDO:MONDO:0008082, MeSH:D018814, MedGen:C0025269, OMIM:162300, Orphanet:247709, Orphanet:653|MONDO:MONDO:0007723, MedGen:C3888239, OMIM:142623, Orphanet:388 | ClinVar preferred disease name | RET-related condition|Hereditary cancer-predisposing syndrome|not specified|not provided|Multiple endocrine neoplasia, type 2|Multiple endocrine neoplasia, type 2a|Multiple endocrine neoplasia, type 2b|Hirschsprung disease, susceptibility to, 1 | HGVS variant names | NC 000010.10:g.43613884A>C | ClinVar review status | criteria provided, conflicting interpretations | Clinical Significance | Conflicting interpretations of pathogenicity | Conflicting clinical significance | Uncertain significance(9)|Likely benign(2) | Variant type | single nucleotide variant | Sequence Ontology for variant type | SO:0001483 | Variant clinical sources reported | ClinGen:CA008694 | Gene symbol:Gene id. | RET:5979 | Molecular consequence | SO:0001583|missense variant | Allele origin | germline | dbSNP ID | 587778656 | Variant Flags | : |
ClinVar @ MSeqDR as full content XML tree
ClinVar @ MSeqDR | RCVaccession | RCV000821548; RCV001015249; RCV002286772; | Chromosome | 10:43613884..43613884 | ClinVar Allele ID | 540553 | Disease database name and identifier | MONDO:MONDO:0015356, MeSH:D009386, MedGen:C0027672, Orphanet:140162|MONDO:MONDO:0019003, MedGen:C4048306, Orphanet:653|MedGen:C3661900 | ClinVar preferred disease name | Hereditary cancer-predisposing syndrome|Multiple endocrine neoplasia, type 2|not provided | HGVS variant names | NC 000010.10:g.43613884A>G | ClinVar review status | criteria provided, multiple submitters, no conflicts | Clinical Significance | Uncertain significance | Variant type | single nucleotide variant | Sequence Ontology for variant type | SO:0001483 | Gene symbol:Gene id. | RET:5979 | Molecular consequence | SO:0001583|missense variant | Allele origin | germline | dbSNP ID | 587778656 | Variant Flags | : |
ClinVar @ MSeqDR as full content XML tree
MSeqDR View Variant at Gbrowse Mitomap Mitochondrial Variant Phenotype Information:
None Ensembl Variant Phenotype Information:
None
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