View genomic variant #0000015295

Chromosome 1
Allele Unknown
Affects function (as reported) Affects function
Affects function (by curator) Affects function
Type -
DNA change (genomic) (Relative to hg19 / GRCh37) g.53153678T>C
Published as -
GERP -
Segregation -
DB-ID chr1_000095
MSCV MSCV_0015295
dbSNP ID -
Frequency -
Sources ; clinvar;
Reference -
Variant remarks -
Genetic origin -
Variant_disease -
Average frequency (large NGS studies) Variant not found in online data sets
Owner LOVD




Variant on transcripts

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ClinVar @ MSeqDR

RCVaccession RCV000505269;
Chromosome 1:53153678..53153678
ClinVar Allele ID 431981
Disease database name and identifier MONDO:MONDO:0020770, MedGen:C5193070, OMIM:618387
ClinVar preferred disease name Spinocerebellar ataxia, autosomal recessive, with axonal neuropathy 3
HGVS variant names NC 000001.10:g.53153678T>C
ClinVar review status no assertion criteria provided
Clinical Significance Pathogenic
Variant type single nucleotide variant
Sequence Ontology for variant type SO:0001483
Variant clinical sources reported ClinGen:CA22543777|OMIM:615623.0001
Gene symbol:Gene id. COA7:65260|LOC129388524:129388524
Molecular consequence SO:0001583|missense variant
Allele origin germline
dbSNP ID 961876891
Variant Flags
:

ClinVar @ MSeqDR as full content XML tree

MSeqDR View Variant at Gbrowse

Mitomap Mitochondrial Variant Phenotype Information:

None

Ensembl Variant Phenotype Information:

None