View genomic variant #0000015270

Chromosome 1
Allele Unknown
Affects function (as reported) Affects function
Affects function (by curator) Affects function
Type -
DNA change (genomic) (Relative to hg19 / GRCh37) g.12069698C>T
Published as -
GERP -
Segregation -
DB-ID MFN2_000022
MSCV MSCV_0015270
dbSNP ID -
Frequency -
Sources ; clinvar;
Reference -
Variant remarks -
Genetic origin -
Variant_disease -
Average frequency (large NGS studies) 0.00038 View details
Owner LOVD




Variant on transcripts

2 entries on 1 page. Showing entries 1 - 2.
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Gene     

Transcript ID     

AscendingTranscript     

Variant ID     

Affects function     

Location     

Exon     

DNA change (cDNA)     

Position     

RNA change     

Protein     

PolyPhen     

GVS function     

Splice distance     

SIFT     
MFN2 00000005 NM_001127660.1 0000015270 ./. - - c.2119C>T - r.(?) p.(Arg707Trp) - - - -
MFN2 00000004 NM_014874.3 0000015270 ./. - - c.2119C>T - r.(?) p.(Arg707Trp) - - - -
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ClinVar @ MSeqDR

RCVaccession RCV000002369; RCV000199654; RCV000239892; RCV000472857; RCV000624830; RCV000778183; RCV000763239; RCV001173687; RCV001775061;
Chromosome 1:12069698..12069698
Allele frequencies from ExAC 0.00033
Allele frequencies from TGP 0.00020
ClinVar Allele ID 17319
Disease database name and identifier .|Human Phenotype Ontology:HP:0003477, Human Phenotype Ontology:HP:0006814, Human Phenotype Ontology:HP:0006842, Human Phenotype Ontology:HP:0007169, Human Phenotype Ontology:HP:0008304, MONDO:MONDO:0004183, MedGen:C1263857|MONDO:MONDO:0012231, MedGen:C4721887, OMIM:609260, Orphanet:ORPHA99947|MONDO:MONDO:0014906, MedGen:C4310725, OMIM:617087|MONDO:MONDO:0015626, MedGen:C0007959, OMIM:PS118220, Orphanet:ORPHA166, SNOMED CT:50548001|MONDO:MONDO:0018993, MedGen:C0270914, Orphanet:ORPHA64746|MONDO:MONDO:0019551, MedGen:C0393807, Orphanet:ORPHA90120, SNOMED CT:128203003|MeSH:D030342, MedGen:C0950123|MedGen:CN517202
ClinVar preferred disease name MFN2-Related Disorders|Peripheral axonal neuropathy|Charcot-Marie-Tooth disease, type 2A2A|Charcot-Marie-Tooth disease, axonal, autosomal recessive, type 2A2B|Charcot-Marie-Tooth disease|Charcot-Marie-Tooth disease, type 2|Hereditary motor and sensory neuropathy with optic atrophy|Inborn genetic diseases|not provided
HGVS variant names NC 000001.10:g.12069698C>T
ClinVar review status criteria provided, multiple submitters, no conflicts
Clinical Significance Pathogenic/Likely pathogenic
Variant type single nucleotide variant
Sequence Ontology for variant type SO:0001483
Variant clinical sources reported OMIM Allelic Variant:608507.0013|Illumina Laboratory Services, Illumina:223508
Gene symbol:Gene id. MFN2:9927
Molecular consequence SO:0001583|missense variant
Allele origin
dbSNP ID 119103267
Variant Flags
:

ClinVar @ MSeqDR as full content XML tree

MSeqDR View Variant at Gbrowse

Mitomap Mitochondrial Variant Phenotype Information:

None

Ensembl Variant Phenotype Information:

None