View genomic variant #0000015112
Chromosome |
M |
Allele |
Unknown |
Affects function (as reported) |
Not classified |
Affects function (by curator) |
Not classified |
Type |
- |
DNA change (genomic) (Relative to hg19 / GRCh37) |
m.14502T>C |
Published as |
- |
GERP |
- |
Segregation |
- |
DB-ID |
chrM_001137 See all 2 reported entries |
MSCV |
MSCV_0004048 |
dbSNP ID |
- |
Frequency |
- |
Sources |
; Somatic:ICGC; |
Reference |
- |
Variant remarks |
- |
Genetic origin |
- |
Variant_disease |
- |
Average frequency (large NGS studies) |
Variant not found in online data sets |
Owner |
Lishuang Shen |
Variant on transcripts
ClinVar @ MSeqDR | RCVaccession | RCV000851178; RCV000855116; | Chromosome | M:14502..14502 | ClinVar Allele ID | 677958 | Disease database name and identifier | Human Phenotype Ontology:HP:0001086, Human Phenotype Ontology:HP:0001112, MONDO:MONDO:0010788, MedGen:C0917796, OMIM:535000, Orphanet:104|MONDO:MONDO:0009723, MedGen:C0023264, OMIM:256000, Orphanet:506 | ClinVar preferred disease name | Leber optic atrophy|Leigh syndrome | HGVS variant names | NC 012920.1:m.14502T>C | ClinVar review status | criteria provided, single submitter | Clinical Significance | Benign | Variant type | single nucleotide variant | Sequence Ontology for variant type | SO:0001483 | Gene symbol:Gene id. | MT-ND6:4541 | Allele origin | germline | dbSNP ID | 201327354 | Variant Flags | : |
ClinVar @ MSeqDR as full content XML tree
MSeqDR View Variant at Gbrowse Mitomap Mitochondrial Variant Phenotype Information:
Locus | Disease | Allele | Amino_Acid_Change | Homoplasmy | Heteroplasmy | STATUS | Note | MT-ND6 | LHON | T14502C | I-V | + | - | Reported - possibly synergistic | Coding_and_Control_Region |
Ensembl Variant Phenotype Information:
None
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