View genomic variant #0000001786

Chromosome 1
Allele Unknown
Affects function (as reported) Affects function
Affects function (by curator) Affects function
Type subst
DNA change (genomic) (Relative to hg19 / GRCh37) g.3331180T>C
Published as -
GERP 4.940
Segregation -
DB-ID PRDM16_000002
MSCV MSCV_0001786
dbSNP ID rs202115331
Frequency -
Sources ; clinvar;
Reference 23768516
Variant remarks -
Genetic origin -
Average frequency (large NGS studies) Variant not found in online data sets
Owner LOVD




Variant on transcripts

1 entry on 1 page. Showing entry 1.
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Gene     

Transcript ID     

AscendingTranscript     

Variant ID     

Affects function     

DNA change (cDNA)     

Protein     

GVS function     

Position     

Exon     

PolyPhen     

RNA change     

SIFT     
PRDM16 00003259 NM_022114.3 0000001786 +/+ c.2660T>C p.(Leu887Pro) missense_variant - 10/17 possibly_damaging(0.883) r.(?) deleterious(0.05)
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ClinVar @ MSeqDR

RCVaccession RCV000054523;
Chromosome 1:3331180..3331180
ClinVar Allele ID 75289
Disease database name and identifier MedGen:CN178850
ClinVar preferred disease name Dilated cardiomyopathy 1LL
HGVS variant names NC 000001.10:g.3331180T>C
ClinVar review status no assertion criteria provided
Clinical Significance Pathogenic
Variant type single nucleotide variant
Sequence Ontology for variant type SO:0001483
Variant clinical sources reported OMIM Allelic Variant:605557.0006|UniProtKB (protein):Q9HAZ2#VAR 070215
Gene symbol:Gene id. PRDM16:63976
Molecular consequence SO:0001583|missense variant
Allele origin germline
dbSNP ID 202115331
Variant Flags
:

ClinVar @ MSeqDR as full content XML tree

MSeqDR View Variant at Gbrowse

Mitomap Mitochondrial Variant Phenotype Information:

None

Ensembl Variant Phenotype Information:

None