View genomic variant #0000000912

Chromosome 22
Allele Unknown
Affects function (as reported) Affects function
Affects function (by curator) Affects function
Type subst
DNA change (genomic) (Relative to hg19 / GRCh37) g.30070880C>T
Published as -
GERP 4.500
Segregation -
DB-ID NF2_000008 See all 2 reported entries
MSCV MSCV_0000912
dbSNP ID rs74315504
Frequency -
Sources ; clinvar;
Reference 7913580
Variant remarks -
Genetic origin -
Average frequency (large NGS studies) Variant not found in online data sets
Owner LOVD




Variant on transcripts

1 entry on 1 page. Showing entry 1.
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Gene     

Transcript ID     

AscendingTranscript     

Variant ID     

Affects function     

DNA change (cDNA)     

Protein     

GVS function     

Position     

Exon     

PolyPhen     

RNA change     

SIFT     
NF2 00003146 NM_000268.3 0000000912 +/+ c.1396C>T p.(Arg466*) stop_gained - 13/16 - r.(?) -
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ClinVar @ MSeqDR

RCVaccession RCV000459035;
Chromosome 22:30070880..30070880
ClinVar Allele ID 404358
Disease database name and identifier MedGen:C0027832, OMIM:101000, Orphanet:ORPHA637, SNOMED CT:92503002
ClinVar preferred disease name Neurofibromatosis, type 2
HGVS variant names NC 000022.10:g.30070880C>G
ClinVar review status criteria provided, single submitter
Clinical Significance Uncertain significance
Variant type single nucleotide variant
Sequence Ontology for variant type SO:0001483
Gene symbol:Gene id. NF2:4771
Molecular consequence SO:0001583|missense variant, SO:0001627|intron variant
Allele origin germline
dbSNP ID 74315504
Variant Flags
:

ClinVar @ MSeqDR as full content XML tree

ClinVar @ MSeqDR

RCVaccession RCV000003456;
Chromosome 22:30070880..30070880
ClinVar Allele ID 18334
Disease database name and identifier MedGen:C0027832, OMIM:101000, Orphanet:ORPHA637, SNOMED CT:92503002
ClinVar preferred disease name Neurofibromatosis, type 2
HGVS variant names NC 000022.10:g.30070880C>T
ClinVar review status criteria provided, single submitter
Clinical Significance Pathogenic
Variant type single nucleotide variant
Sequence Ontology for variant type SO:0001483
Variant clinical sources reported OMIM Allelic Variant:607379.0014
Gene symbol:Gene id. NF2:4771
Molecular consequence SO:0001587|nonsense, SO:0001627|intron variant
Allele origin germline
dbSNP ID 74315504
Variant Flags
:

ClinVar @ MSeqDR as full content XML tree

MSeqDR View Variant at Gbrowse

Mitomap Mitochondrial Variant Phenotype Information:

None

Ensembl Variant Phenotype Information:

variation_namechromseq_region_startseq_region_endallele_stringminor_alleleminor_allele_freqvariation_setPhenotype_description
rs74315504223007088030070880C/TOMIM phenotype variantsNEUROFIBROMATOSIS, TYPE II
rs74315504223007088030070880C/TOMIM phenotype variantsNeurofibromatosis, type 2
CM941106223007088030070880HGMD_MUTATIONHGMD-PUBLIC variantsAnnotated by HGMD but no phenotype description is publicly available